Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,968,900 IS5 (–) +4 bp coding (985‑988/1104 nt) wecA → UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)107 (0.720) 72/196 1.3 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3968903 0 (0.000)coding (988/1104 nt) wecA UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase
* ? NC_000913 = 3653230NA (NA)169 (1.130) 93/196 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3968900 = 0 (0.000)coding (985/1104 nt) wecA UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase

Only 100 of 169 total aligned reads displayed.

ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3653133‑3653230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGG  >  NC_000913/3968900‑3968997
                                                                                                                                                                                                    
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCC                                                                                                   >  1:820153/1‑99
  TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA                                                                                                 >  1:66616/1‑99
  TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA                                                                                                 >  2:3759002/1‑99
   tTCGTCGAAGGTAAGTTGATTACTCATGATCAACCCTGTTCTATGTCTCCGGATTACAAACATGATCTCATATCAGGGACTTGTTCTCACCTTACCTAG                                                                                                <  2:3623952/98‑1
    TCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGC                                                                                               >  2:569723/1‑99
      GGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCAT                                                                                             <  1:2982340/99‑1
       GCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATT                                                                                            >  1:215925/1‑99
          AAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTT                                                                                         >  1:112298/1‑99
          AAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTT                                                                                         >  1:3863292/1‑99
           AGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTGCGCACCTTCCCTAGCATTCTTC                                                                                        <  2:1047856/99‑1
             GTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGCTGACAAACCTGCTCCCATATCAGGGACTTCTTCGCACCTTCCCAAGCATTCTTCCT                                                                                      >  2:2194018/1‑99
               AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCT                                                                                    >  1:271019/1‑99
                AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTA                                                                                   >  1:2763968/1‑99
                  TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATG                                                                                 <  2:3709375/99‑1
                  TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATG                                                                                 <  1:3107589/99‑1
                   TGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGG                                                                                <  1:923788/99‑1
                     ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGAT                                                                              <  2:1904632/99‑1
                              GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTA                                                                     >  2:3213539/1‑99
                                 GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCCAGCATTCTTCCTCTATGGATATTGCATTAAGC                                                                  >  2:2893019/1‑99
                                  AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCG                                                                 >  1:3665446/1‑99
                                   ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGT                                                                <  1:3891018/99‑1
                                    CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTG                                                               >  2:192922/1‑99
                                    CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTG                                                               >  1:1714638/1‑99
                                    CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTG                                                               <  1:3522425/99‑1
                                    CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTG                                                               >  1:2622382/1‑99
                                     CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGC                                                              >  1:2649013/1‑99
                                     CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGC                                                              >  2:2847686/1‑99
                                     CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGC                                                              >  1:1294545/1‑99
                                     CCTGTTCTATGGCTCCACATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCACTATGGATATTGCATTAACCGTGC                                                              >  2:1131904/1‑99
                                       TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCT                                                            <  2:1614766/99‑1
                                       TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCT                                                            <  1:1075791/99‑1
                                       TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCT                                                            <  1:3136641/99‑1
                                         TTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGG                                                          >  1:461418/1‑99
                                         TTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGG                                                          >  1:1657764/1‑99
                                           CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAA                                                        >  1:1058837/1‑99
                                           CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAA                                                        >  1:3186035/1‑99
                                           CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAA                                                        <  2:2367485/99‑1
                                            TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAA                                                       <  1:2832768/99‑1
                                             ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAG                                                      >  1:234388/1‑99
                                             ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAG                                                      <  2:3684102/99‑1
                                               GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTT                                                    <  2:2667171/99‑1
                                               GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTT                                                    <  2:2230458/99‑1
                                                 CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGC                                                  <  1:1623605/99‑1
                                                 CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGC                                                  >  1:2135959/1‑99
                                                 CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGC                                                  >  1:3851057/1‑99
                                                  TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCT                                                 <  1:1592187/99‑1
                                                  TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCT                                                 <  2:2915515/99‑1
                                                  TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCT                                                 >  1:3914030/1‑99
                                                  TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGAACCTTCCCAAGCATTCTTCCTCTATGGATATTACATTAAGCGTGCCTGGAAAGTTGCT                                                 >  2:2668025/1‑99
                                                   CCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTC                                                <  1:2918296/99‑1
                                                      GATGACAAACATGGTCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCT                                             <  1:1752991/99‑1
                                                       ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTT                                            <  2:3400677/99‑1
                                                         GACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTA                                          >  1:848619/1‑99
                                                           CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATT                                        <  1:3343735/99‑1
                                                           CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATT                                        <  1:2265454/99‑1
                                                           CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATT                                        <  1:2891948/99‑1
                                                           CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATT                                        <  2:2343374/99‑1
                                                            AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCCTTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTt                                       >  1:3399286/1‑98
                                                            AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTA                                       <  1:1326541/99‑1
                                                            AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTA                                       >  1:1792837/1‑99
                                                             AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAA                                      >  1:608661/1‑99
                                                             AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAA                                      <  2:1293480/99‑1
                                                             AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAA                                      <  1:2909753/99‑1
                                                              ACATTATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTCCCTGGAAAGTTGCTCGCTTTATTAAG                                     <  2:435271/99‑1
                                                               CATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGC                                    <  2:1673638/99‑1
                                                               CATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGC                                    <  1:1264252/99‑1
                                                                  GATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCG                                 >  2:2138548/1‑99
                                                                  GATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTGTATTAAGCGCG                                 >  2:3063950/1‑99
                                                                   ATCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTACGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGT                                <  2:2847018/99‑1
                                                                    TCTCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTA                               >  2:2295406/1‑99
                                                                      TCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAA                             >  2:2785615/1‑99
                                                                      TCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAA                             >  2:2271596/1‑99
                                                                      TCATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAA                             >  2:367202/1‑99
                                                                        ATATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAAC                           >  2:3384760/1‑99
                                                                         TATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACG                          >  1:3474511/1‑99
                                                                         TATCAGGGACTTGTTAGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCTTGGAAAGTTGCTCGCTTTATTGAGCGCGTAAAACG                          <  2:874252/99‑1
                                                                          ATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGC                         >  1:1480848/1‑99
                                                                          ATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGC                         <  1:1328174/99‑1
                                                                          ATCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGC                         <  2:3440934/99‑1
                                                                           TCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCA                        <  2:113268/99‑1
                                                                           TCAGGGACTTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCA                        <  2:3110003/99‑1
                                                                                   TTGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGT                <  1:1021293/99‑1
                                                                                   TTGTTCGCACCTTCCCTAGCATTCGTACTCTACGGCTATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAAGGCAGACTccct                >  2:3067747/1‑95
                                                                                   TTGTTAGCACCTTCCCTAGAATTCTTCCTCTATGGATATTGCATTAAGCGAGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGa                >  2:2824675/1‑98
                                                                                    TGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTA               <  1:3257684/99‑1
                                                                                    TGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTA               <  2:790686/99‑1
                                                                                    TGTTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTA               <  1:2397202/99‑1
                                                                                      TTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGA             >  1:1396499/1‑99
                                                                                      TTCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGA             >  2:3028218/1‑99
                                                                                       TCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAA            >  1:3705703/1‑99
                                                                                       TCGCACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAA            <  1:3490071/99‑1
                                                                                          CACCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATC         <  2:151976/99‑1
                                                                                            CCTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGT       <  1:1482856/99‑1
                                                                                             CTTCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTG      <  1:197775/99‑1
                                                                                              TTCCCTAGCATTCTTCCTCTATGGATATTGCATGAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGG     <  2:482516/99‑1
                                                                                               TCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGT    <  1:2038722/99‑1
                                                                                               TCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGT    <  1:629297/99‑1
                                                                                               TCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGT    <  1:2849966/99‑1
                                                                                               TCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGT    <  1:2869955/99‑1
                                                                                               TCCCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGT    <  2:1986075/99‑1
                                                                                                                                                                                                    
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3653133‑3653230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGG  >  NC_000913/3968900‑3968997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.