Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,081,6880AT20.9% 327.6 / 88.2 158I287N (ATT→AAT) dacDD‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6b
Reads supporting (aligned to +/- strand):  ref base A (65/60);  new base T (14/19);  total (79/79)
Fisher's exact test for biased strand distribution p-value = 4.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.73e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 162 total aligned reads displayed.

GTAGCACCATCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTACCACTGCAAT  >  NC_000913/2081590‑2081785
                                                                                                  |                                                                                                 
gTAGCACCATCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCaaaa                                                                                                   <  2:647506/99‑1 (MQ=255)
  aGCACCCTCCAGACCTCTTGTTCCGTTCCCAGGTCGGTATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAttt                                                                                                 <  2:1521329/99‑1 (MQ=255)
  aGCACCATCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAAtt                                                                                                 <  1:1810546/99‑1 (MQ=255)
    cACCATCTAGTACTCTTGTTCCGTTCCCAGTTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTg                                                                                               <  2:2598913/99‑1 (MQ=255)
    cACCATCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTg                                                                                               >  2:3443127/1‑99 (MQ=255)
     aCCATCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGc                                                                                              >  1:2161481/1‑99 (MQ=255)
       cATCCAGAACTCTTGTTCCGTTCCCAGGACGATCTTTTCTTTATCGGCACACCAGATCCGTTACGTTCCGACCTCTCTACCACGGTCCAAAATTTGCAc                                                                                            >  2:1989033/1‑99 (MQ=255)
        aTCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCAcc                                                                                           >  1:1877517/1‑99 (MQ=255)
          ccAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgt                                                                                         <  2:1136226/99‑1 (MQ=255)
          ccAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgt                                                                                         <  2:1180716/99‑1 (MQ=255)
          ccAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgt                                                                                         <  2:2846403/99‑1 (MQ=255)
          ccAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCgt                                                                                         >  1:390830/1‑99 (MQ=255)
           cAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtg                                                                                        <  1:2341972/99‑2 (MQ=255)
           cAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtg                                                                                        <  1:2268609/99‑2 (MQ=255)
           cAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtg                                                                                        <  1:127818/99‑2 (MQ=255)
           cAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtg                                                                                        <  1:219177/99‑2 (MQ=255)
           cAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCgta                                                                                        <  1:2438119/99‑1 (MQ=255)
           cAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCgta                                                                                        <  1:298972/99‑1 (MQ=255)
            aGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtgg                                                                                       <  2:459731/99‑3 (MQ=255)
            aGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtgg                                                                                       <  1:3716370/99‑3 (MQ=255)
            aGAACTCTTGTTCCGTGCCCAGGTCGATATTTTCTTTGTCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAATTTTGCACCgtgg                                                                                       <  2:1023003/99‑3 (MQ=255)
             gAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCgtagt                                                                                      <  2:2708933/99‑1 (MQ=255)
               aCTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTaa                                                                                    >  1:1876582/1‑99 (MQ=255)
                 tctTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAg                                                                                  >  2:1485388/1‑99 (MQ=255)
                 tctTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAg                                                                                  >  1:2535349/1‑99 (MQ=255)
                 tctTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAg                                                                                  <  1:2916780/99‑1 (MQ=255)
                 tctTGTTCCGTTCCCAGGTCGATATTTCCTTTCTCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCCCGGTGCAAAATTTGCACCGTAGTAAAg                                                                                  >  2:1192190/1‑99 (MQ=255)
                   ttGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGtt                                                                                >  2:3386607/1‑99 (MQ=255)
                   ttGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGtt                                                                                >  2:3388471/1‑99 (MQ=255)
                     gttccgttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGtttt                                                                              <  1:634525/99‑1 (MQ=255)
                     gttccgttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGtttt                                                                              <  1:1066714/99‑1 (MQ=255)
                     gttccgttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGtttt                                                                              >  1:2641402/1‑99 (MQ=255)
                     gttccgttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAACTTGCACCGTAGTAAAGtttt                                                                              <  1:1833415/99‑1 (MQ=255)
                      ttccgttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTCCCCACGGTGCAACATTTGCACCGTAGTAAAGTTttg                                                                             >  1:160283/1‑99 (MQ=255)
                      ttccgttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACC‑TTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTttgt                                                                            <  1:3433528/99‑1 (MQ=255)
                           ttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGcc                                                                        >  1:2824017/1‑99 (MQ=255)
                           ttccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGcc                                                                        >  1:1380577/1‑99 (MQ=255)
                            tccCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGccc                                                                       <  2:3649784/99‑1 (MQ=255)
                             cccAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGcccc                                                                      <  1:2982251/99‑1 (MQ=255)
                              ccAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCTACCTTTCTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGcccct                                                                     >  2:3587396/1‑98 (MQ=255)
                                aGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGcctccta                                                                   >  2:1278377/1‑97 (MQ=255)
                                aGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCaa                                                                   <  2:3161269/99‑1 (MQ=255)
                                aGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCaa                                                                   >  2:2907518/1‑99 (MQ=255)
                                    cGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCCCCGGAGTATAGCTTTTTTTCCCCCAACGCa                                                               >  2:2521507/1‑99 (MQ=255)
                                     gATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAg                                                              >  2:1676954/1‑99 (MQ=255)
                                           ttCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAAttt                                                        >  2:3338182/1‑99 (MQ=255)
                                           ttCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGGTCCCCCCAACGCAGTAAttt                                                        >  1:3711719/1‑99 (MQ=255)
                                            tCTTTATCGCCATACCAGATGCGTACCGCACCGACCTTTTTACCAAGGTGCAAAAATTGCACCGTAGTGCAGTATTGTTGCCACCAACGCAGTAAattt                                                       >  2:2241914/1‑99 (MQ=255)
                                             cTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTc                                                      >  2:60798/1‑99 (MQ=255)
                                              tttATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCt                                                     <  2:686569/99‑1 (MQ=255)
                                              tttATCGCCATACCAAATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCt                                                     <  1:2593604/99‑1 (MQ=255)
                                               ttATCGCCGTACCAGAGGCGTTCCGGTCCGACCTTTTTCCCACGGTGCAATATTTGCACCGTAGTAAATTTTTGTTGCCTCCAACGGAGTAATGTTCtt                                                    <  2:3626340/99‑1 (MQ=255)
                                               ttATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCtt                                                    <  1:3796685/99‑1 (MQ=255)
                                               ttATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCtt                                                    <  1:502220/99‑1 (MQ=255)
                                                 aTCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGc                                                  <  2:1772108/99‑1 (MQ=255)
                                                 aTCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGc                                                  <  2:296294/99‑1 (MQ=255)
                                                 aTCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGc                                                  <  1:16762/99‑1 (MQ=255)
                                                  tCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTTCAAAATTTGCACCGTAGGAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGcc                                                 >  1:3562226/1‑99 (MQ=255)
                                                    gCCATCCCAGATGCGTTCCGTTACGACCTTTTTCCCACGGCGCAAAATTTGCACCGTAGTACAGTTTTGTTGCCCCCAACGCAGTAATTTTCTGGCctc                                               >  2:439869/1‑99 (MQ=255)
                                                     ccATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCctct                                              >  1:2673437/1‑99 (MQ=255)
                                                        tACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTcc                                           >  2:2856449/1‑99 (MQ=255)
                                                           cAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCa                                        >  1:690310/1‑99 (MQ=255)
                                                           cAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCa                                        >  2:1635739/1‑99 (MQ=255)
                                                           cAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCa                                        <  1:425181/99‑1 (MQ=255)
                                                            aGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCAc                                       <  1:2085247/99‑1 (MQ=255)
                                                            aGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCAc                                       <  1:3489341/99‑1 (MQ=255)
                                                            aGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCAc                                       <  1:3141279/99‑1 (MQ=255)
                                                            aGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTAACCCCAACGCAGTAATTTTCTTGCCTCTTTCTCAc                                       >  2:2475288/1‑99 (MQ=255)
                                                              aTGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGa                                     <  2:3301045/99‑1 (MQ=255)
                                                               tGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGAc                                    <  1:3443520/99‑1 (MQ=255)
                                                                  gttgcgatccGACCTTTTTCCCACGGTTCAAAACTTGCACCGTTGTAAAGTTTTGGGCCCCTCAAGGCAGTAAAGCCCTTGGCTGTTCCGCACGGCCtt                                 >  2:845594/1‑99 (MQ=255)
                                                                   ttccgttccgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCttt                                >  1:1968576/1‑99 (MQ=255)
                                                                    tccgttccgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCtttt                               <  2:753594/99‑1 (MQ=255)
                                                                     ccgttccgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTg                              <  1:1356948/99‑1 (MQ=255)
                                                                       gttccgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCa                            >  2:405478/1‑99 (MQ=255)
                                                                        ttccgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCGCCAACGCAGTAATTTTCTTGCCTCTTGCTCACGACCATTTGCAc                           >  1:3637128/1‑99 (MQ=255)
                                                                        ttccgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCAc                           >  1:1060069/1‑99 (MQ=255)
                                                                         tccgACCTTTTTCCCACGGTGCAAAACTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACt                          <  1:1473173/99‑1 (MQ=255)
                                                                           cgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGt                        <  2:3364876/99‑1 (MQ=255)
                                                                           cgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGt                        <  1:337896/99‑1 (MQ=255)
                                                                           cgACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGt                        <  2:2263053/99‑1 (MQ=255)
                                                                                tttttCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGcc                   >  2:2145257/1‑99 (MQ=255)
                                                                                 ttttCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGccc                  <  2:78545/99‑1 (MQ=255)
                                                                                  tttCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTCTCAGcccc                 >  2:2091961/1‑99 (MQ=255)
                                                                                   ttCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGccccc                <  1:1999173/99‑1 (MQ=255)
                                                                                      ctaCGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCAtt             >  1:2027492/3‑99 (MQ=255)
                                                                                      ccACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCAtt             <  1:1100016/99‑1 (MQ=255)
                                                                                       taCGGTGCAAATTTTGCACCGTGGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTa            >  1:1118293/2‑99 (MQ=255)
                                                                                       taCGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTa            >  1:1632428/2‑99 (MQ=255)
                                                                                       taCGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTa            >  1:1498503/2‑99 (MQ=255)
                                                                                       taCGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTa            >  2:3413780/2‑99 (MQ=255)
                                                                                       taCGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTa            >  1:2514979/2‑99 (MQ=255)
                                                                                       cACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTa            <  1:821999/99‑1 (MQ=255)
                                                                                        aCGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTAc           >  2:1223498/1‑99 (MQ=255)
                                                                                         cGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTAcc          >  2:2356460/1‑99 (MQ=255)
                                                                                         cGGTGCAAATTTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTAcc          >  1:171783/1‑99 (MQ=255)
                                                                                          ggTGCAAATTTTGCACCGTGGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTACCa         <  2:1087282/99‑1 (MQ=255)
                                                                                          ggTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTACCa         <  1:2495241/99‑1 (MQ=255)
                                                                                           gTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTACTTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTACCAc        >  2:2454865/1‑99 (MQ=255)
                                                                                            tGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTACCACt       <  1:3153550/99‑1 (MQ=255)
                                                                                                  |                                                                                                 
GTAGCACCATCCAGAACTCTTGTTCCGTTCCCAGGTCGATATTTTCTTTATCGCCATACCAGATGCGTTCCGTTCCGACCTTTTTCCCACGGTGCAAAATTTGCACCGTAGTAAAGTTTTGTTGCCCCCAACGCAGTAATTTTCTTGCCTCTTCCTCACGACCTTTTGCACTGTCAGCCCCCATTACCACTGCAAT  >  NC_000913/2081590‑2081785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑