Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,173,363 Δ2 bp intergenic (‑1/+1) gatC ← / ← gatC pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC/pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,173,3610C.89.9% 386.5 / 16.7 99pseudogene (2/442 nt)gatCpseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
Reads supporting (aligned to +/- strand):  ref base C (0/10);  new base . (63/26);  total (63/36)
Fisher's exact test for biased strand distribution p-value = 1.63e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009132,173,3620C.90.8% 387.0 / 17.3 99pseudogene (1/442 nt)gatCpseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
Reads supporting (aligned to +/- strand):  ref base C (0/9);  new base . (63/26);  total (63/36)
Fisher's exact test for biased strand distribution p-value = 4.49e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 107 total aligned reads displayed.

GCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATA  >  NC_000913/2173129‑2173577
                                                                                                                                                                                                                                              ||                                                                                                                                                                                                                       
gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATaccaccgccgt                                                                                                                                                                                                                    >  2:1518093/1‑234 (MQ=255)
             tgtgCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCagcagc                                                                                                                                                                                                     >  2:1160035/1‑239 (MQ=255)
              gtgCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACCCCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCCCCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCagcagc                                                                                                                                                                                                     <  1:835097/238‑1 (MQ=255)
              gtgCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCagcagc                                                                                                                                                                                                     <  1:1624110/238‑1 (MQ=255)
              gtgCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCagcagc                                                                                                                                                                                                     <  1:1518093/238‑1 (MQ=255)
                  aaaCCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGc                                                                                                                                                                                                <  1:996569/239‑1 (MQ=255)
                       aaTAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATaccaccgcc                                                                                                                                                                                                                      >  1:505064/1‑211 (MQ=255)
                            tttGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAg                                                                                                                                                                                       >  1:705082/1‑238 (MQ=255)
                                cGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCaa                                                                                                                                                                                  >  1:1048370/1‑239 (MQ=255)
                                           cacgggTGAATGCTAAAAATAGTGACCCCCGAAATTAGGGGGCGGAACAGATTCCCCAAATGCACGGCGCCCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCCCCTGATTACCCGGCACACAAACAGCAATAAAAA‑TGGTGAGTGAAATAAAAATCAGGCTTG‑CCATTaccaccgccgta                                                                                                                                                                                                                   <  2:710431/195‑7 (MQ=255)
                                               ggTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGa                                                                                                                                                                    >  2:1124303/1‑238 (MQ=255)
                                                gTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAcc                                                                                                                                                                  >  2:650783/1‑239 (MQ=255)
                                                  g‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccg                                                                                                                                                                 >  1:808888/1‑238 (MQ=255)
                                                    aTGCTAATAAGGATGCCACCCGAGATTAAGGGGCGAACCAGATTCCCACGATGCACGGCGACCGCCATCGCCGCGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTCCCCGGCACACAAACAGCAATAAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccgc                                                                                                                                                                <  2:611427/238‑1 (MQ=255)
                                                     tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccgccg                                                                                                                                                              >  1:26152/1‑239 (MQ=255)
                                                     tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccgccg                                                                                                                                                              >  2:1642066/1‑239 (MQ=255)
                                                     tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGAAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccgccg                                                                                                                                                              >  2:502381/1‑239 (MQ=255)
                                                     tGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGAATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCcagca                                                                                                                                                                                                       >  1:710431/1‑198 (MQ=255)
                                                          aTAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACt                                                                                                                                                          >  1:1545897/1‑238 (MQ=255)
                                                          aTAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACt                                                                                                                                                          >  1:1214609/1‑238 (MQ=255)
                                                          aTAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACt                                                                                                                                                          >  1:87611/1‑238 (MQ=255)
                                                                atgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGAt                                                                                                                                                                                           >  1:1295436/1‑199 (MQ=255)
                                                                atgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATc                                                                                                                                                                                >  2:2279722/1‑210 (MQ=255)
                                                                atgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATc                                                                                                                                                                                <  1:2279722/210‑1 (MQ=255)
                                                                 tgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ACGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCg                                                                                                                                                       >  1:195088/1‑234 (MQ=255)
                                                                     ccccGAGATTAAGGGGCAGAACAGATCCCCAGGCGGCCGGGCGCCCCCCACCGCCCAGAAGAAGCCA‑ATGGTGGAAAG‑ATCGCAAAAC‑GGCAGCACCTGATTCCCCGGCACAAAAACAGAAATAAAAA‑TGGGGAGGGGAAAAAAAACCAGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAAc                                                                                                                                              <  2:784333/238‑1 (MQ=255)
                                                                      cccGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGc                                                                                                                                                                                     >  2:1298689/1‑199 (MQ=255)
                                                                      cccGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGc                                                                                                                                                                                     <  1:1298689/199‑1 (MQ=255)
                                                                      cccGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAAc                                                                                                                                              >  1:2201979/1‑238 (MQ=255)
                                                                           gaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTaaa                                                                                                                                               >  1:1045423/1‑232 (MQ=255)
                                                                           gaTTAAGGTGCGAAACAGATTTCCACGATGCACGGCACCCGCCAGCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTCCCCGGCACACAAACAGCAATTAAAA‑TGGTGGGTGGGATAAAAATCAGGCTTG‑CCGATCCCA‑‑CCGCCGTATGt                                                                                                                                                                                                              <  2:645477/169‑1 (MQ=255)
                                                                           gaTTAAGGTGCGAAACAGATTCCCCCGAGGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTCCCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATcccac                                                                                                                                                                                                                          <  2:1717204/159‑1 (MQ=255)
                                                                               aaGGTGCGAAACAGTTTACGACGATGCGCGGACCCCGCCGTCGCCACGAAGAAGCGG‑ATGGGGGAAAG‑ATCGCAAAAC‑GGCAGCACCTGATTCCCCGGCACACAAACAGCAATAAAAA‑TGGTGAGGGGGATAAAAATCAGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGc                                                                                                                                    <  2:1796803/239‑1 (MQ=255)
                                                                                 ggTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAg                                                                                                                                     >  1:912163/1‑236 (MQ=255)
                                                                                 ggTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAg                                                                                                                                     >  1:1769443/1‑236 (MQ=255)
                                                                                     cGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGt                                                                                                                                                                                                              >  1:1717204/1‑159 (MQ=255)
                                                                                     cGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAgcagca                                                                                                                                                                                                    >  1:645477/1‑169 (MQ=255)
                                                                                     cGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGc                                                                                                                                                                                                <  1:300529/173‑1 (MQ=255)
                                                                                     cGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGc                                                                                                                                                                                                >  2:300529/1‑173 (MQ=255)
                                                                                     cGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCtt                                                                                                                              >  1:387522/1‑239 (MQ=255)
                                                                                      ggAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAAATTCGCCTGTAAACGACTACGAGCCTGCTTa                                                                                                                             >  1:922097/1‑239 (MQ=255)
                                                                                           agttctCCACAACGCAGGGCCACCCCCAGCCCCAGAAAGAAG‑CG‑GTGGGGGGAAGAACCGCAAAAC‑GGCAGCCCCTGATTCCCCGCCCAAAAAAAAGAAATAAAAA‑GGGGGGGGGGGAAAAAAACCGGGCTTC‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                        <  2:912163/234‑1 (MQ=255)
                                                                                             tttcccACGAGGCAGGGCACCCGCCCCGGCCAAAAAGAGGCCG‑ATGGTGGAAAG‑ACCGCAAAGC‑GGCAGCCCCTGATTCCCCGACACAAAACCAGCAATTAAAA‑TGGGGAGGGGAAAAAAAAACAGGCTTG‑CCGATAC‑‑CGCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTaa                                                                                                                                                <  2:2217235/209‑1 (MQ=255)
                                                                                                  cACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGtt                                                                                                                 >  1:1479746/1‑239 (MQ=255)
                                                                                                  cACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGtt                                                                                                                 >  1:2337483/1‑239 (MQ=255)
                                                                                                    cGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTaa                                                                                                               >  1:1284253/1‑239 (MQ=255)
                                                                                                       tGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGa                                                                                                                                      >  1:2217235/1‑213 (MQ=255)
                                                                                                       tGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAcc                                                                                                            >  2:61679/1‑239 (MQ=255)
                                                                                                               cccccccACCGCCACAAAGAAGCAG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTCCCCGGCACACAAACAGCAATAAAAA‑TGGTGAGTGGGAAAAAAATCGGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatga                                                                                                    <  2:797866/234‑1 (MQ=255)
                                                                                                                aCCGCAAGCGCCACGAAGAGGCCG‑GGGGTGGCAGG‑A‑CACCAAACGGGCAGCCCTTGATACCCCGACACACAAACAGCAATAAAAG‑GGGAGAGGGGAAAAAAAACCGGGTTGG‑CCGA‑ACC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCTCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatga                                                                                                    <  2:1284253/238‑1 (MQ=255)
                                                                                                                 ccGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGc                                                                                                                                    >  1:818985/1‑205 (MQ=255)
                                                                                                                 ccGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatgatg                                                                                                  >  2:851389/1‑239 (MQ=255)
                                                                                                                         cccAGGAAGAAGCCG‑ATGGTGACAAG‑ACCGCAAAGC‑GGCAGCCCCTGTTTACCGGACACAAAAACAGCAATAAAAT‑GGGTGAGTGGAAAAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAt                                                                                          <  2:1597868/238‑1 (MQ=255)
                                                                                                                          ccccGAAGAAGGCGAATGGGGGAAAG‑ACCGCAAACG‑GGCAGCACCTAATCCCCCGGCACAAAAACAGAAATAAAAA‑TGGTGAGGGGAAAAAAAACCGGGCTTG‑CCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAt                                                                                          <  2:705082/236‑1 (MQ=255)
                                                                                                                             caaagaacCCG‑ATGGTGGAAAG‑TTCGCAAAAC‑GCAAGCCCCTGATACCCCGGCCCAAAAACAGAAATAAAAA‑GGGTGAG‑GGGAAAAAAATCAAGGTTGCCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCAcc                                                                                      <  2:87611/237‑1 (MQ=255)
                                                                                                                                                 aaaaaccccaaaaG‑GGCAGCCCCTGATTCCCCGGCCAAAAAACAACAATAAAAA‑GGGTGAGGGGAAAAAAAATCAGGCTTC‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCAt                                                                     <  2:2201979/228‑1 (MQ=255)
                                                                                                                                                         ccAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTgccg                                                             >  2:542315/1‑238 (MQ=255)
                                                                                                                                                                  cagcaCCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATaccaccg                                                                                                                                                                                                                        >  1:387754/1‑76 (MQ=255)
                                                                                                                                                                  cagcaCCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATaccaccg                                                                                                                                                                                                                        <  2:387754/77‑2 (MQ=255)
                                                                                                                                                                        ctatatACCCGGCAACAAAACAAAAAATAAAAGTGGTGA‑TGAGAAAAAAAACAGGGTTG‑CCCATTCC‑CCCCCCCTTATGCCCCAGCAGCAACGCCGGATCAAGCCCAATCAGAAACCCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGcc                                               <  2:1214609/234‑1 (MQ=255)
                                                                                                                                                                        cTGATTACCCGGCACACAAACACCAATAAAAA‑GGGTGAGTGGGATAAAAACCAGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGc                                                                                                                                                      <  2:1422660/135‑1 (MQ=255)
                                                                                                                                                                          gATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGTAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCa                                              >  1:513191/1‑237 (MQ=255)
                                                                                                                                                                          gATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCa                                              >  1:1819770/1‑237 (MQ=255)
                                                                                                                                                                           aTTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCa                                              >  1:1750168/1‑236 (MQ=255)
                                                                                                                                                                                  ggCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTccc                                                                                                                                                                                                           >  1:2293510/1‑72 (MQ=255)
                                                                                                                                                                                  ggCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTccc                                                                                                                                                                                                           <  2:2293510/72‑1 (MQ=255)
                                                                                                                                                                                  ggCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGa                                                                                                                                            >  1:1422660/1‑135 (MQ=255)
                                                                                                                                                                                  ggCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATac                                    >  1:1908829/1‑239 (MQ=255)
                                                                                                                                                                                  ggCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATac                                    >  1:1966751/1‑239 (MQ=255)
                                                                                                                                                                                    cacacaAACAGCAATAAAAA‑TGGTGAGGGGAATAAAAATCAGGCTGG‑CGGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCa                                                                                                                                                                                   <  2:236046/94‑1 (MQ=255)
                                                                                                                                                                                    cacaaaAACAGCAATAAAAA‑GGGGAGGGGGGAAAAAATTGGGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACACCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGt                                                                                               <  2:477620/178‑1 (MQ=255)
                                                                                                                                                                                       aaaaaaAGCAATAAAAA‑TGGTGAGGGGGAAAAAAACCAGGCTTG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatga                                                                                                    <  2:740065/168‑1 (MQ=255)
                                                                                                                                                                                         aaaCAGAAATAAAAA‑TGGTAAGTGGGAAAAAAACCAGCCTTG‑CCGA‑ACC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACCCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatg                                                                                                     <  2:1159153/167‑1 (MQ=255)
                                                                                                                                                                                          aaCCGCAAATAAAA‑TGGGGGGGGGGAAAAAAAACCGGCTTT‑CCGAT‑CCCCCCCCCCTTATGCCCCAGCAGCACCCCCGGATCAAGGCAAATCAGGAACCCCTGCCCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCCCTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTg                             <  2:2337483/239‑1 (MQ=255)
                                                                                                                                                                                              gCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACt                                                                                                                                                                         >  1:236046/1‑94 (MQ=255)
                                                                                                                                                                                              gCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCAccc                                                                                     >  1:477620/1‑178 (MQ=255)
                                                                                                                                                                                              gCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCAccc                                                                                     >  1:1217081/1‑178 (MQ=255)
                                                                                                                                                                                              gCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCa                                                                   >  1:613131/1‑196 (MQ=255)
                                                                                                                                                                                                aaTAAAAG‑TGGGGGGTGGAAAAAAAACCGGGCTGG‑CCAATCCCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTgcc                                                              <  2:2217171/199‑1 (MQ=255)
                                                                                                                                                                                                 aTTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATaccac                                                                                                                                                                                                                          >  1:1636228/1‑44 (MQ=255)
                                                                                                                                                                                                 aTTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATaccac                                                                                                                                                                                                                          <  2:1636228/44‑1 (MQ=255)
                                                                                                                                                                                                 aTTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAt                                                                                          >  1:740065/1‑170 (MQ=255)
                                                                                                                                                                                                   tAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTaa                                                                                           >  1:1159153/1‑167 (MQ=255)
                                                                                                                                                                                                       a‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCcgc               >  2:393869/1‑239 (MQ=255)
                                                                                                                                                                                                          ggTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTaaa                                                                                                              >  1:583940/1‑142 (MQ=255)
                                                                                                                                                                                                          ggTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGa             >  1:1092710/1‑239 (MQ=255)
                                                                                                                                                                                                             gAGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa          >  1:2216380/1‑239 (MQ=255)
                                                                                                                                                                                                              aGTGGGATAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGAt         >  1:2047889/1‑239 (MQ=255)
                                                                                                                                                                                                              aGTGGGAAAAAAATCAGGCTGG‑CCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa          <  1:2258870/238‑1 (MQ=255)
                                                                                                                                                                                                               gggggAAAAAAACACGGTTTT‑CCTATACC‑CCCCGCCGTTTGTCCCGGCACCACCCCCGAACAAAGGCCAATCAGGACCCCCGTCCCGCCGAACTTCCCCTGTAACCGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa          <  2:1750168/236‑1 (MQ=255)
                                                                                                                                                                                                                     tAAAAATCAGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATa  >  1:188057/1‑239 (MQ=255)
                                                                                                                                                                                                                         aaTCAGGCTGG‑CCGATCCCA‑‑CCGCCGTATGTCCCAGCGGCAGCGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGAt                                                                                                                        <  2:2044000/117‑1 (MQ=255)
                                                                                                                                                                                                                             agccTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGt                                                                                   <  2:705469/147‑1 (MQ=255)
                                                                                                                                                                                                                             aGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTaaa                                                                                                              <  1:871206/123‑1 (MQ=255)
                                                                                                                                                                                                                             aGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTaaa                                                                                                              >  2:871206/1‑123 (MQ=255)
                                                                                                                                                                                                                             aGGCTTG‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGt                                                                                   >  1:705469/1‑150 (MQ=255)
                                                                                                                                                                                                                                   g‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGc                                                                                                                                    <  2:1020325/95‑1 (MQ=255)
                                                                                                                                                                                                                                   g‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGc                                                                                                                                    >  1:1020325/1‑95 (MQ=255)
                                                                                                                                                                                                                                   g‑CCGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTaaa                                                                                                              >  1:2044000/1‑117 (MQ=255)
                                                                                                                                                                                                                                     ccGATACCA‑‑CCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAc                                                                                                             >  1:1059484/1‑117 (MQ=255)
                                                                                                                                                                                                                                              ||                                                                                                                                                                                                                       
GCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTG‑ATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCG‑ATGGTGGCAAG‑ATCGCCAAAC‑GGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAATCAGGCTTG‑CCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATA  >  NC_000913/2173129‑2173577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑