New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2817942133 (0.890)5 (0.040) 3/262 12.6 3.9% intergenic (‑82/+117) argQ/argZ tRNA‑Arg/tRNA‑Arg
?NC_000913 2818078 = 130 (1.000)noncoding (58/77 nt) argZ tRNA‑Arg
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGCGCAACGTTATCCTTCCTGGTGCCTGCGGTTAATACCGCTATCTCTTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2817701‑2817942
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggtgcatccgggaggattCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCT  >  NC_000913/2818078‑2818314
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
TGGCGCAACGTTAGCCTTCCTGGTGCCTGCGGTTAATACCGCTATCTCTTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCAGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAG                                                                                                                                                                                                                                                   <  2:867189/238‑1
                                                                                      TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCA                                                                                                                                                                                                                                                           >  2:515836/1‑144
                                                                                      TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCA                                                                                                                                                                                                                                                           <  1:515836/144‑1
                                                                                                                                                                                         ATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGT                                                                                                                                                                                                                                                              <  1:1300680/42‑1
                                                                                                                                                                                         ATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGT                                                                                                                                                                                                                                                              >  2:1300680/1‑42
                                                                                                                                                                                           ATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                      <  1:1265999/224‑1
                                                                                                                                                                                           ATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGCCCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGATTACTCTATCCACCTGAGCTACGGATGCATCGGGCAATTTATTTTACTGCTGATATTGATAACGCTACTAAAGCCATATCAAGTAAGA                                                                                                                         >  1:2139390/1‑173
                                                                                                                                                                                                     CTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGG                                                                                                                                                                                                                                                      >  2:314933/1‑38
                                                                                                                                                                                                     CTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGG                                                                                                                                                                                                                                                      <  1:314933/38‑1
                                                                                                                                                                                                     CTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGGTGAGCTACGGATGTATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATC                                                            >  2:1265999/1‑224
                                                                                                                                                                                                                             GATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTA                                                                                                                                                                                                                      >  1:670435/1‑46
                                                                                                                                                                                                                             GATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTA                                                                                                                                                                                                                      <  2:670435/46‑1
                                                                                                                                                                                                                              ATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCC                                                                        <  2:267110/187‑1
                                                                                                                                                                                                                              ATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCC                                                                        >  1:267110/1‑187
                                                                                                                                                                                                                                GGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA                                                                                                                                                                                            >  2:583158/1‑69
                                                                                                                                                                                                                                GGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTA                                                                                                                                                                                            <  1:583158/69‑1
                                                                                                                                                                                                                                GGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                                                                                                                                                                 <  1:1774320/48‑1
                                                                                                                                                                                                                                GGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                                                                                                                                                                 >  2:1774320/1‑48
                                                                                                                                                                                                                                GGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTT                                                                                                                                                                                                                          >  2:1859693/1‑39
                                                                                                                                                                                                                                  TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTA                                                                           <  2:789425/180‑1
                                                                                                                                                                                                                                  TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTA                                                                           >  1:789425/1‑180
                                                                                                                                                                                                                                  TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                                                                                                                                                                 <  2:1949673/46‑1
                                                                                                                                                                                                                                  TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                                                                                                                                                                 >  1:1949673/1‑46
                                                                                                                                                                                                                                  TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCC                                                                                                                                                                                                                   >  1:641058/1‑44
                                                                                                                                                                                                                                  TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCC                                                                                                                                                                                                                   <  2:641058/44‑1
                                                                                                                                                                                                                                   GCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCC                                                                                                                                                                                                                   >  1:298589/1‑43
                                                                                                                                                                                                                                   GCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCC                                                                                                                                                                                                                   <  2:298589/43‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGAT                                                                                                                                                           <  2:325899/97‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGAT                                                                                                                                                           >  1:325899/1‑97
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTG                                                                                                                                                                >  2:1975105/1‑92
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTG                                                                                                                                                                <  1:1975105/92‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTA                                                                                                                                                                                                              >  1:1954308/1‑46
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTA                                                                                                                                                                                                              <  2:1954308/46‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                                                                                                                                                                 <  2:650423/43‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGA                                                                                                                                                                                                                 >  1:650423/1‑43
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTA                                                                                                                                                                                                                      >  2:1585167/1‑38
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTA                                                                                                                                                                                                                      <  1:1585167/38‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCG                                                                                                                                                                                                                        <  1:1147039/36‑1
                                                                                                                                                                                                                                     ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCG                                                                                                                                                                                                                        >  2:1147039/1‑36
                                                                                                                                                                                                                                       CCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTG                                                                                                                                                                <  2:1035907/90‑1
                                                                                                                                                                                                                                       CCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTG                                                                                                                                                                >  1:1035907/1‑90
                                                                                                                                                                                                                                            AGGATTCGAACCTCCGACCGCTCGGTTCGTGGCCGAGTACT                                                                                                                                                                                                            <  2:587161/41‑1
                                                                                                                                                                                                                                            AGGATTCGAACCTCCGACCGCTCGGTTCGTGGCCGAGTACT                                                                                                                                                                                                            >  1:587161/1‑41
                                                                                                                                                                                                                                                TTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCT  >  1:1532209/1‑239
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
TGGCGCAACGTTATCCTTCCTGGTGCCTGCGGTTAATACCGCTATCTCTTCGATACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2817701‑2817942
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggtgcatccgggaggattCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCT  >  NC_000913/2818078‑2818314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.