Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913753,1250TA34.6% 101.4 / 32.4 52intergenic (‑330/+60)ybgD/gltAputative fimbrial‑like adhesin protein/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (33/1);  new base A (0/18);  total (33/19)
Fisher's exact test for biased strand distribution p-value = 4.45e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGGGGTATAGATAGACGTCATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTC  >  NC_000913/752958‑753359
                                                                                                                                                                        |                                                                                                                                                                                                                                           
gggggTATAGATAGACGTCATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTa                                                                                                                                                                                                             >  1:1056197/1‑200 (MQ=255)
                                                        tttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCaa                                                                                                              >  1:1469772/1‑239 (MQ=255)
                                                                    ttttGGGTTGCTAATATTTTGGGTTTTTTTTTTTTTTTAAAATATTTATATAGGTGTTTAAATGTATTTTATTTTTAAAATTTTTTGTTTTTA‑GGAAAAAAAAAATAAACCCGCCATATGAACGGCGGGTTaaa                                                                                                                                                                                                           <  1:259650/132‑1 (MQ=255)
                                                                              cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACaa                                                                                                                                                                                                 >  2:259650/1‑134 (MQ=255)
                                                                              cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAACATTAACGCTTGATATCGCTTTTAAAGTCGCGGTTTTCATATCCTGTATACAGCTGACGCGGACGGGGAATCTTCATACCGTCACTGTGCAt                                                                                        >  1:1119753/1‑239 (MQ=255)
                                                                                   aaTTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGaa                                                                                                                                                                                                                       >  1:506595/1‑107 (MQ=255)
                                                                                              ttttATTTTTTTAAAATTTTTATATAGGTTTTTAAATGGTTTTTTTTTTTAAATTTTTTTGTTTTTA‑GGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTaaa                                                                                                                                                                                                           <  1:1000219/105‑1 (MQ=255)
                                                                                              ttCTTTTTTTTTAAAATATCTATATGGGTCTTTTAATGATTTTTATTTTTAAATTTTTTTGTGTTTA‑GGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTaaa                                                                                                                                                                                                           <  1:929188/108‑1 (MQ=255)
                                                                                                        tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGa                                                                                                                                                                                                                        >  1:32828/1‑85 (MQ=255)
                                                                                                        tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTTCaa                                                                                                                                                                                                 >  2:1000219/1‑108 (MQ=255)
                                                                                                        tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCaa                                                                                                                                                                                                 >  2:929188/1‑108 (MQ=255)
                                                                                                        tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGCATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCa                                                               >  1:2114711/1‑238 (MQ=255)
                                                                                                               ttttatatgGGTCTTATAAGGGTTTTTTTTTTTACAATTTTTTGTGTTTA‑GGAAAAAAAAAATAACCCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                                                                                                                                    <  2:603974/95‑1 (MQ=255)
                                                                                                                 atataaaGTTTTGTTAATGGTTTTTTTTTTTACATTTTTTTTTTTTTA‑GCCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCa                                                                                                <  2:1462258/195‑1 (MQ=255)
                                                                                                                  tatatgGGTTTTTTAATGGTTTTTTTTTTAAAATTTTTTTTTTTTTA‑GGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa                                                                                                               <  2:123184/180‑1 (MQ=255)
                                                                                                                  aaaataGGTCTGTTAATGGATTTTTTTTTTACAATTTTTTGTTTTGA‑GGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                                                                                                                         <  1:1212531/151‑1 (MQ=255)
                                                                                                                    tataGTTTTGTTAATGGATTTTATTTTTACAATTTTTTGTTTTTA‑GGAAAAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTctt                                                                                                                                            <  2:175050/149‑3 (MQ=255)
                                                                                                                    aatgggTCTGTAAAGGATTTTTATTTTTAAAATTTTTTGTTTTTA‑GGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTaaa                                                                                                                                                                                                           <  1:2110547/82‑1 (MQ=255)
                                                                                                                         gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATg                                                                                                                                                                                                                         >  1:1385489/1‑67 (MQ=255)
                                                                                                                         gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTAAAACTTAACAATCAACCATTAACGCTTTTTATCGCTTTTAAAg                                                                                                                                                         >  1:2049986/1‑131 (MQ=255)
                                                                                                                         gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCa                                                                                                                                                                                          >  1:603974/1‑98 (MQ=255)
                                                                                                                           cTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCAttt                                                                                      >  1:1462258/1‑196 (MQ=255)
                                                                                                                           cTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGAAATCAACCATTAAAGCTTGATATCGCTTTTAAAATCGCGTTTTTTATATCCTTTATACAGCTGACGCGGACGGGCAATTTTTATACCCTTACTTTGCATTTTGCTCCCGAGGGCGAGCCAGCCAACGCTACGT‑GCCATTTCgca                                          >  2:92294/1‑237 (MQ=255)
                                                                                                                            tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCatat                                                                                                                                                                                                                                             >  2:1254829/1‑44 (MQ=255)
                                                                                                                            tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCatat                                                                                                                                                                                                                                             <  1:1254829/44‑1 (MQ=255)
                                                                                                                            tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTAAAACTTAGCAATCAACCCTTAAAGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGGCGGGCAATCTTCATACCGTCACTGTGCATTTCCCTCCCGTGGGCGATCCAGCCCACGGTACGG‑GCCATTGCGaaa                                         >  2:813769/1‑239 (MQ=255)
                                                                                                                            tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAat                                                                                                                                                                                                         >  2:1839523/1‑80 (MQ=255)
                                                                                                                            tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAc                                                                                                     >  1:123184/1‑180 (MQ=255)
                                                                                                                            tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGGACGT‑GCCATTGCGaaa                                         >  1:1208226/1‑239 (MQ=255)
                                                                                                                              ttAATGTATTTTTTTTTTAAATTTTTTTGTTTTTA‑GGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAc                                                                                                     <  1:1270093/178‑1 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAat                                                                                                                                                                                                         >  1:880232/1‑78 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAATCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTTTGCATTTCGCTCCCGTGGGCGATCCCTCCAACCGTACGT‑GCCATTGCGACAAt                                       >  2:1355623/1‑239 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                                                                                                                                    <  1:963320/83‑1 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                                                                                                                                    >  2:963320/1‑83 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCTTATCCTGtata                                                                                                                                  >  1:175050/1‑149 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACaa                                                                                                                                                                                                 >  2:1750969/1‑86 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACaa                                                                                                                                                                                                 >  2:2110547/1‑86 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCCTATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAAt                                       >  1:1543692/1‑239 (MQ=255)
                                                                                                                              ttAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAAt                                       >  1:1256860/1‑239 (MQ=255)
                                                                                                                                  tgatttttattttTACATTTTTTTGTTTTTA‑GGAAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACg                                   <  1:92294/235‑1 (MQ=255)
                                                                                                                                  ggttgttttttttTACATTTTTTTTTTTTAA‑GAAAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACg                                   <  2:1543692/234‑1 (MQ=255)
                                                                                                                                   ggtttttttttttAAATTTTTTTTTGTTTAGGGAAAAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACg                                   <  2:2114711/236‑1 (MQ=255)
                                                                                                                                   ggATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTATAAATTTGCAATCAAACATTAACGCCTTATATCGCTTTTAAAATCGCGTTTTTTATATTCCTTATACAATCTAAGCGGGCCGGCAATCTTCATTCCCTCACTCTTCATTTCTCTCCACTGGGCCATTCAACCAACGGGACGTGGCCACTCCGAAAAtaagg                                   >  2:1220873/1‑235 (MQ=255)
                                                                                                                                   ggATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTTATATCCTTTATACAACTGACGCGGACGGGCAATCTTTCTACCGTCACTGTGCATTTCTCTCCCGTGGGGGATCACACCAACGGTACGT‑GCCCTTTTGAAAATGACgg                                  >  2:2267262/1‑239 (MQ=255)
                                                                                                                                    gATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAATCGCGTTTTTCATATCCTTTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACggg                                 >  1:1596290/1‑238 (MQ=255)
                                                                                                                                    atttttttttttAAATTTTTTTTTTTTTA‑GACAAAAAAAAATAAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGt                                                                                                                                                        <  2:2240599/119‑1 (MQ=255)
                                                                                                                                      ttttattttaAAATTTTTTTGTGTTAA‑GACAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGa                               <  1:1220873/239‑1 (MQ=255)
                                                                                                                                        ttattttTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTaa                                                                                                                                                                                                            >  1:329673/1‑65 (MQ=255)
                                                                                                                                        ttattttTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAATCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCCCTGTGCATTTCGCTCCCGTGGGCGATCCACCCCACGGTACCT‑GCCATTTCGAAAACGACGGTGAAc                             >  2:1731216/1‑239 (MQ=255)
                                                                                                                                             tttACATTTTTTTGTGTTTA‑GGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGAACATGGa                        <  1:813769/239‑1 (MQ=255)
                                                                                                                                              ttACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATTGCTTTTAAAGTCGCGTTTTTc                                                                                                                                              >  1:2240599/1‑121 (MQ=255)
                                                                                                                                               taaaaTTTTTTGTTTTTA‑GAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGAACATGGAAg                      <  2:1256860/236‑1 (MQ=255)
                                                                                                                                                             ttaa‑GGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACg                                                                                                                                                                            <  1:1201858/73‑1 (MQ=255)
                                                                                                                                                                a‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACCTAGCAATCAACCCTTAAAGCTTGATATCGCTTTTTAAATAGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCCTCACTGTGCATTTCTCTCCAGTGGGCGATCCAGCCAACGGTACGG‑GCCCTTGCGAAAATAACGGTGAAAAAGGAAGAATGAAAACCCATCGCt     >  2:639009/1‑239 (MQ=255)
                                                                                                                                                                   aaataaAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGAAc                             <  1:1415384/211‑1 (MQ=255)
                                                                                                                                                                    aataaAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTc  <  2:1208226/238‑1 (MQ=255)
                                                                                                                                                                      tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTCatat                                                                                                                                          >  1:479575/1‑102 (MQ=255)
                                                                                                                                                                      tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCg                                                                                                   >  1:469986/1‑141 (MQ=255)
                                                                                                                                                                      tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCg                                                                                                   <  2:469986/141‑1 (MQ=255)
                                                                                                                                                                      tataAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACCTAACAATTAAACCTTAAAGCCTGATAATGCCTTTAAAGTCCCGTTTTTCATATCCCGTATACAg                                                                                                                               >  1:168465/1‑113 (MQ=255)
                                                                                                                                                                        taAAAATCAACCCGCCATATGAACGGCGGGGTTAAAAATTTTCAACTTAGCAAACAAACATTAACGCTTGatattg                                                                                                                                                                  >  2:1201858/1‑74 (MQ=255)
                                                                                                                                                                        |                                                                                                                                                                                                                                           
GGGGGTATAGATAGACGTCATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTA‑GGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGT‑GCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTC  >  NC_000913/752958‑753359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑