Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,554,000 | 0 | T | G | 39.7% | 104.2 / 19.5 | 68 | Y557S (TAC→TCC) | maeA | malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme |
Reads supporting (aligned to +/- strand): ref base T (9/32); new base G (27/0); total (36/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.86e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGC > NC_000913/1553780‑1554235 | cgcAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCCGAAAt > 1:1356779/1‑239 (MQ=255) cgcAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTTGGGTTGCCCGaaaa > 2:889983/1‑238 (MQ=255) cgcAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTCGGGTTGCCAGaaaa > 1:2000714/1‑238 (MQ=255) gTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTATCGTCAATgg > 1:1000433/1‑236 (MQ=255) aaCGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGGAGGTGCGGGGATCGGGTTGCCCGGAAATATCGtaa > 2:1616876/1‑228 (MQ=255) aaCGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGAAGTCGCGGGATTAGGCCTGGCAAAAATTATCGTTAATgagccgt > 1:2337900/1‑233 (MQ=255) tgatCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTTCCAGAAAATATCCTCAAAGGCCTCTTGCAGGGCCTcc > 1:1709858/1‑237 (MQ=255) cTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTTGGCTTGTCCGAAATTATCTTCAAAGGGCTGTTTCCGGGCGTCGGCagag > 2:59911/1‑239 (MQ=255) acaacTGCAGCTTTCATGTTTCCTCTTTTGGGGAT‑ATGTTTCTGCATAGAGGGGGGGGAAAAGGGAATTTATTCGCCACTACCCAGTATGGATGAGATCTAAAAAGGGGAGAGGAAAATACCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGGGGTCCGGCGGTAGTCGCGGTATCCGGCTTGCCAAAAATTATCGTCAATGCCCTGTTGCAGGGTTTCGGCAGAGTTTTTCa < 2:1511054/239‑1 (MQ=255) acTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTATTGTCCATTGCCCTTTGCCGGGGTTCGGCAGGGGgttttaac > 1:1511054/1‑234 (MQ=255) cAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCCTGCCCGAAAATATCTGCAAAGGCCTATTGCCGGGGTGCGGCGGCGGATTTTAGCGCCAc > 2:1713398/1‑239 (MQ=255) cAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGGAGGCGCGGGATTCGGCCTGCCCGAAATTATCGGCAATGGCCTGGTGCAGGGGTTTGGCAGAGGGTTTTACCGCCAc > 1:1204504/1‑239 (MQ=255) gCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCTGCTTGCCAGAAAATATCGTCAAAGGCCTGTTGCAGGGCTTCGGCAGAGGGTTTCACccccccc > 1:1862242/1‑235 (MQ=255) ttCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAAt > 1:2299312/1‑185 (MQ=255) ctcctTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAAATATCGTCAATGGCCTGTTTCAGGGCTTCGGCAGAGGGTTTTACCGCCCCGCCTTGCTGCTgcg > 1:1441072/1‑238 (MQ=255) tttCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTTCCCGAAATTATCGTCAAAGGCCTGTTggtgg > 2:653927/1‑189 (MQ=255) aGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCCGGGCTTCGGCAGAGGATTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAAtt > 1:278594/1‑239 (MQ=255) aGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGGAGTCGCGGGGTTTTGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCgg > 2:797745/1‑180 (MQ=255) cccAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCTGCTTTCCAGAAATTATCGTCAATGGGCTGTTTCAgg > 2:512559/1‑139 (MQ=255) aTGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGAtt > 1:1413766/1‑91 (MQ=255) aTCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGCACGGCGGCGGTCGCGGTATTCGGCGTGCCAGAAATAATTGTCAACGGGCTGtt > 2:155892/1‑119 (MQ=255) cTGAAAAAGGGAGAGGGAAATAGCCCGATAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGGGGGATTTgg > 1:333081/1‑87 (MQ=255) aaaaaGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTTGGCTTGCCCGAAAATATCGTCCAAGGCCCTTTGCAGGGCTTCGGCAGAGGGTTTTACCGCCACGCCCTGCTGCTGCGCCCTTTTTCCAACCGCACACGCCATTGCGCGGGGGACTTTTTGAATATCTTTTTGTTCCGGCCGTAACATACCtct > 2:530852/1‑233 (MQ=255) agagGGAAATAGCCCGGTAGCCTTCCCTCCCGGGCGCAGGCTTAGATGGAGGTGCGGCGGTAGTCGCGGTTTTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGTTTCGGCAGAGGTTTTCACCGcc < 2:1062441/135‑1 (MQ=255) agagGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGcc < 1:1300812/102‑1 (MQ=255) agGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc < 2:1809855/99‑1 (MQ=255) agGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc > 1:1809855/1‑99 (MQ=255) gggAAATAGCCCGTTAGCCTTCACTACCGGGGGCAGGTTTAGAGGGAGTAGCGGCGGTAGTCGGGGTATCCGGCTGGCCAGAAATTATCGTCAAGGGCCTGTTGCAGGGTTTCGGCAGAGGTTTTCCCCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCa < 2:1441072/238‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTCCCGGGCGCAGGCTTAGAGGGGGGTACGGGGGTAGGCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGTTTCGGCAGAGGTTTTCACCGCCa < 2:1000433/131‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCt < 2:2299312/73‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCt < 1:1756494/73‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGcc < 1:1837419/77‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAAtt < 1:2328362/84‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAt < 1:2073772/86‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTAt < 2:1356779/86‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCa < 1:155892/91‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATg < 2:958286/94‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc < 1:653927/96‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc < 1:512559/96‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc < 1:119063/96‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGc < 1:797745/103‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGc < 1:889983/103‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGTTTCGGCAGAGGtttt < 1:1095421/123‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCtt < 1:306754/110‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCa < 1:59911/115‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCAGAGTTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCgg < 1:1262330/178‑1 (MQ=255) gAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTAAAGGGCCTGTTGCAGGGTTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGgag < 1:239593/181‑1 (MQ=255) aaaatgccccGGTAGCCTTCCATCCGGGGCGCAGGTTAAGAGGGGGGTACGGGGTTGGTCGGGGTATTCGGCTTGCAAAAAATTATCTACAATGCCCTGTTGCGGGGCTTCGGCAGGGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCgg < 2:1204504/200‑1 (MQ=255) aaaaaAGCCCGGTGGCCTTCCCTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTTTTGCAGGGCTTCGGCAGAGGTTTTCCCCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCt < 1:977426/187‑1 (MQ=255) aGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTCGGGTTGCCAGAAATTATTGTCAATGGCCTGTTGCAGGGCTTCGGGAGAGGGTTTTACCGCCACGCCTtgct > 1:1062441/1‑135 (MQ=255) aGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTCGGCTTGCCAGAAAATATCGTCAATGGGCTGTTGCAggg > 2:1300812/1‑102 (MQ=255) gCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGTATTCGGCGTGGCAGAAATTATCGGCAATGGGCTGTTGCCGGGGCTCGGCAGAGGGTTTTACCCCCCCGCCCTGCTTCTGCGGCACTTTTCCCACCGCCAAAGCCATTGCCCGGGGGGCCTTTTGGATTTTTTTTCGTTCCGGGCGGAACCTACCTTCGCCG‑GTGCGCCCCACTGGTGGAt > 2:1323098/1‑239 (MQ=255) tAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTTCGCTTTCCCGAAAATATCGTCAATGGCCCGTTGCAGGGCTTCGGCCGAGGTTTTTCCCCCCCCGCCCTTCTGCCGCGCCCTTTTTCCAACCCCCAACGCAATTTCGCGGGGGACCTTTTGTAAATCTTTTAATTCCGGCAGTACCCAACCCTTCCCC‑TTCAGACCCACATGTGAATACTgc > 2:2227622/1‑238 (MQ=255) cACTCCCGGGCGCAGACTTAGATGGAGGTGGGGCGGTGGTCGCGTTATTCGGCTTGCCAAAATTTATCGCCAAGGGCCTGTGGCGGGGTTTCGGCAGAGGTTTTCACCGCCa < 2:432727/112‑1 (MQ=255) ggCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc < 2:2237641/69‑1 (MQ=255) ggCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGc > 1:2237641/1‑69 (MQ=255) ggCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCCGAAAATATTGTCAAAGGCCTGTTGCAGGGCCTTGGCCGAGGGTTTTACCGCCCCGCCTTTCTGCTGCGCCCTTTTTCCCACCCCCAAAGCCATTTCGCGGGGGGCTTTTTGAATATTTTTCAATTTCCGCCGGACCCAACCTTCCCCGTTTCGGCCCCAA‑GGTGGATACTTCCCCACCGGTTc > 2:738544/1‑234 (MQ=255) ggCGCAGGCTTAGATGGAGGTACGGCGGTAGGCGCGGGATTTGGCTTGCCCGAAAATATATGCAATGGGCTGTTGGAGGGCTTTGGCAGAGGGTTTTACCGCCACGCCCTGCTGCTGCGCCCCTTTTCCAACCCCAAACACAAATTGGCGGGGGACTTTTTGAATATCTTTCAGTTTCGGCGGTAACAAACCCTTCCCG‑TGTCGCACCACACGTGGATAATGGGCCCGCGTGTCACtt > 2:1221716/1‑238 (MQ=255) cgcAGGCTTAGATGGAGGTACGGCGGTGGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTTTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTgcg < 1:1849535/117‑1 (MQ=255) cgcAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGGATTCGGCTTGCCAGAAATTTTCGTCAATGGCCTGTTGCAGGGCCTCGGCAGAGGGTTTCACCGCCACGCCTtgctg > 1:432727/1‑112 (MQ=255) gaaGGCTTAGATGGGGGACCGGGGGTAGGCGGGGTTTTCGGTTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGTTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGcc < 1:530852/236‑1 (MQ=255) gCTTAGATGGAGGTGCGGGGGTAGTCGGGGTTTTCGGTTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCa < 1:917746/202‑1 (MQ=255) gATGGAGGTACGGCGGTAGTCGCGGGATTTGGCTTTCCCGAAATTATCGTCAATGGCCTGTTGGAGGGCTTTGGCCGGGGGTTTTACCGCCACCCCTTGCTGCTGCGCCCTTTTTcc > 2:1849535/1‑117 (MQ=255) aGGTACGGCGGTAGTCGCGGGAATCGGGCTGCCAGGAATTATCGTCAATGGGCTGTTTCAGGGCTTCTGCAGAGGGTTTCACCCCCACCCCTTTCTGCCGCGCCACTTTTCCCACCCCCAACGCCATTGCGCGGGGGAATTTCTGGATATTTTTCAGTTTCGGCCGGACCAAACCTTTCCCC‑TTTAGTACCAAAAGTGAATa > 2:917746/1‑202 (MQ=255) gtccgggggTAGTCGCGGTTTTCGGCTTGCCAAAAATTATCGTCAAGGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCAt < 1:1616876/235‑1 (MQ=255) ggcggTAGTCGCGGGATTTGGCCTGCCCGAAATTATCGTCCATGGCCTGGTGCAGGGGTTCGGCAGAGGGTTTTACCGCCACGCCCTGCTGCTGCGCCCTTTTGCCAACCGCAAACGCAATTTCGCCGGGGGCCTTCTGAATATCTTTCAGGTCCCGCAGTATCATAACTTCGCCC‑GTTAGCAACAATTGGTAATACTGCGCCCACGTTTTCCTTGCCGACATCAGCAGCCCACCgggg > 2:508381/1‑237 (MQ=255) ggTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGAcgc > 1:1214981/1‑238 (MQ=255) ggTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTACCGACATCAGCATCTCATCGGTGATACGTGAcgc > 1:927556/1‑238 (MQ=255) tATTCGGTTTGCCAAAAATTATCGTAGATGGCCTTTTGCGGGCCTGCGGCAGAGGTTTTCCCCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGa < 1:2024283/206‑1 (MQ=255) | CGCAGTGTTTTATACGTAACGTCAACATGATGATCCTTCGTAACAACTGCAGCCTTCATAGTTCCTCCTTTTCGGATGATG‑TTCTGCATAGCAGGTGAGGCAAATGAGATTTATTCGCCACTACCCAGTATGGATGAGATCTGAAAAAGGGAGAGGGAAATAGCCCGGTAGCCTTCACTACCGGGCGCAGGCTTAGATGGAGGTACGGCGGTAGTCGCGGTATTCGGCTTGCCAGAAATTATCGTCAATGGCCTGTTGCAGGGCTTCGGCAGAGGTTTTCACCGCCACGCCTTGCTGCTGCGCCATTTTGCCAACCGCAAACGCAATTGCGCGGGAGACTTTCTGAATATCTTTCAGTTCCGGCAGTACCATACCTTCGCCG‑TTCAGCACCAATGGTGAATACTGCGCCAGCGTTTCACTTGCCGACATCAGCATCTCATCGGTGATACGTGACGC > NC_000913/1553780‑1554235 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |