Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,876,678 IS5 (+) +4 bp coding (98‑101/1038 nt) iap → aminopeptidase in alkaline phosphatase isozyme conversion

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)74 (1.680) 46/304 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 2876678 = 0 (0.000)coding (98/1038 nt) iap aminopeptidase in alkaline phosphatase isozyme conversion
* ? NC_000913 = 2290113NA (NA)36 (0.820) 31/304 0.4 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 2876681 0 (0.000)coding (101/1038 nt) iap aminopeptidase in alkaline phosphatase isozyme conversion

Only 100 of 102 total aligned reads displayed.

GCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGC  >  NC_000913/2876455‑2876905
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                
aactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                                                                                                                                                 <  2:532302‑M2/5‑1 (MQ=255)
   tggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACt                                                                                                                                                                                                                              <  2:688894‑M2/8‑1 (MQ=255)
     gcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                  >  2:36967‑M2/219‑222 (MQ=255)
               tcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCAc                                                                                                                                                                                                                       >  1:36445‑M2/209‑223 (MQ=255)
               tGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTTTATGGGATTTAAAGGCTCACTATGTTTTTCGCATTTGGCCACCCTACCCCTGCCCTTGCGCTCGGCGCATGCTTTATTTTCCCCGCACACGCCCCGTCACCTCAACCTGGGCAGTTTGTTAAcgaaagtgcgaacaaa                                                                                                                                                                                                                  <  2:183396‑M2/228‑17 (MQ=255)
               tGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaag                                                                                                                                                                                                                  >  2:48945‑M2/1‑212 (MQ=255)
                  ttAAGGCACCGGATTGCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtcc                                                                                                                                                                                                               >  1:183674‑M2/1‑209 (MQ=255)
                   gctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                  >  2:10927‑M2/205‑208 (MQ=255)
                      ggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTa                                                                                                                                                                                                           >  1:656742‑M2/202‑228 (MQ=255)
                       gCACCGGATTTCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgat                                                                                                                                                                                                          >  2:350285‑M2/1‑204 (MQ=255)
                        ccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTAct                                                                                                                                                                                                         >  2:374802‑M2/200‑228 (MQ=255)
                               gtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagcca                                                                                                                                                                                                                              >  1:598146‑M2/193‑196 (MQ=255)
                                tttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagccat                                                                                                                                                                                                                             <  2:597195‑M2/9‑6 (MQ=255)
                                     ggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTActttcttt                                                                                                                                                                                                   >  2:137505‑M2/187‑221 (MQ=255)
                                      gcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACtttctttc                                                                                                                                                                                                  <  1:137706‑M2/36‑1 (MQ=255)
                                         ttAGGAAGATTTGAAATTGGTTTAGCGAAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCATACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaag                                                                                                                                                                                                                  >  1:351764‑M2/1‑186 (MQ=255)
                                         gaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggtgaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCAt                                                                                                                                                                                        <  1:519775‑M2/46‑1 (MQ=255)
                                          accaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATg                                                                                                                                                                                       >  2:640678‑M2/182‑228 (MQ=255)
                                                  tttGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTTAGGACTCACTATGTTTTTCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTTTGCTTTATTCTCCCCGTTCACGCCTCGTCACCTAAACCTTGCGATTTTTCTAAggaaggtgcgaacaagtccccgctattagatcatgtttgtgatcttgagcc                                                                                                                                                                               <  2:626732‑M2/228‑52 (MQ=255)
                                                    acgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGa                                                                                                                                                                                 >  1:197678‑M2/172‑224 (MQ=255)
                                                    acgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGa                                                                                                                                                                                 >  1:611419‑M2/172‑224 (MQ=255)
                                                         agtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCa                                                                                                                                                                        <  2:36390‑M2/62‑1 (MQ=255)
                                                          tGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                                                                                                       >  1:627732‑M2/1‑169 (MQ=255)
                                                              gagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGaa                                                                                                                                                                     <  1:375421‑M2/65‑1 (MQ=255)
                                                                 agatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGa                                                                                                                                                                      >  2:62088‑M2/159‑222 (MQ=255)
                                                                 agatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGtt                                                                                                                                                                >  1:49484‑M2/159‑228 (MQ=255)
                                                                  gatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGaa                                                                                                                                                                     <  1:62179‑M2/65‑1 (MQ=255)
                                                                     ctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCt                                                                                                                                                            >  1:455316‑M2/155‑228 (MQ=255)
                                                                     aGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTGCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                                                                                                            >  1:93045‑M2/1‑158 (MQ=255)
                                                                       cactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACAAATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTg                                                                                                                                                           <  2:666975‑M2/75‑1 (MQ=255)
                                                                          cAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCCCTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                                                                                                       >  2:326876‑M2/1‑153 (MQ=255)
                                                                             aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATta                                                                                                                                                    >  1:116029‑M2/147‑228 (MQ=255)
                                                                                 tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATAtt                                                                                                                                                <  1:641701‑M2/86‑1 (MQ=255)
                                                                                  ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCg                                                                                                                                                                                   >  2:491851‑M2/142‑192 (MQ=255)
                                                                                  ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGa                                                                                                                                                                      >  2:444196‑M2/142‑205 (MQ=255)
                                                                                   gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCgg                                                                                                                                                                                  <  1:492654‑M2/52‑1 (MQ=255)
                                                                                   gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGaa                                                                                                                                                                     <  1:444923‑M2/65‑1 (MQ=255)
                                                                                               taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTc                                                                                                                                   <  2:197369‑M2/99‑1 (MQ=255)
                                                                                                     gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAgg                                                                                                                                                                                                                          >  2:603494‑M2/123‑134 (MQ=255)
                                                                                                      cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGc                                                                                                                                                                                                                         <  1:604460‑M2/13‑1 (MQ=255)
                                                                                                      cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACt                                                                                                                                                                              >  1:579953‑M2/122‑177 (MQ=255)
                                                                                                       gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAgg                                                                                                                                                                                                                          >  1:202632‑M2/121‑132 (MQ=255)
                                                                                                       gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTc                                                                                                                                                                             <  2:579023‑M2/57‑1 (MQ=255)
                                                                                                        aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGc                                                                                                                                                                                                                         <  2:202320‑M2/13‑1 (MQ=255)
                                                                                                         agaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGt                                                                                                                        <  2:115855‑M2/110‑1 (MQ=255)
                                                                                                           aaacggtctaaattggctaattcaaggcatttacgggaaaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTa                                                                                                                      <  2:610439‑M2/112‑1 (MQ=255)
                                                                                                                   aaGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                                                                                                                                               <  2:616664‑M2/163‑52 (MQ=255)
                                                                                                                    aGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                                                                                              >  1:617646‑M2/1‑111 (MQ=255)
                                                                                                                        cTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                                                                                                         <  2:242244‑M2/228‑122 (MQ=255)
                                                                                                                        cTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctga                                                                                                                                                                                                           <  2:372946‑M2/130‑24 (MQ=255)
                                                                                                                        cTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggt                                                                                                                                                                                                                           <  1:598540‑M2/114‑8 (MQ=255)
                                                                                                                         tCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgat                                                                                                                                                                                                          >  1:373564‑M2/1‑106 (MQ=255)
                                                                                                                         tCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtg                                                                                                                                                                                                                          >  2:597589‑M2/1‑106 (MQ=255)
                                                                                                                           ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCgg                                                                                                      >  1:32462‑M2/101‑228 (MQ=255)
                                                                                                                           aCTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccc                                                                                                                                                                                                              <  1:465279‑M2/124‑21 (MQ=255)
                                                                                                                            cTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccct                                                                                                                                                                                                             >  2:464516‑M2/1‑103 (MQ=255)
                                                                                                                                 caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagccat                                                                                                                                                                                                                             >  2:192229‑M2/95‑98 (MQ=255)
                                                                                                                                   ttCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                                                                                                  <  1:133913‑M2/144‑49 (MQ=255)
                                                                                                                                        tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCTTGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCg                                                                                                       >  2:608597‑M2/88‑214 (MQ=255)
                                                                                                                                         ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCTTGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCgg                                                                                                      <  1:609573‑M2/128‑1 (MQ=255)
                                                                                                                                            cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGta                                                                                     <  2:49412‑M2/145‑1 (MQ=255)
                                                                                                                                                  aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTta                                                                               >  2:367123‑M2/78‑228 (MQ=255)
                                                                                                                                                    aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTtata                                                                             <  2:454572‑M2/153‑1 (MQ=255)
                                                                                                                                                     tACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtcc                                                                                                                                                                                                               <  1:585159‑M2/97‑20 (MQ=255)
                                                                                                                                                      aCCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccc                                                                                                                                                                                                              >  2:584222‑M2/1‑77 (MQ=255)
                                                                                                                                                       ccGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagcgattttcttgtcccgcat                                                                           <  1:134899‑M2/227‑152 (MQ=255)
                                                                                                                                                          cTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgaga                                                                                                                                                                                                    <  2:4791‑M2/103‑31 (MQ=255)
                                                                                                                                                           tGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagat                                                                                                                                                                                                   >  1:4797‑M2/1‑72 (MQ=255)
                                                                                                                                                           gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagc                                                                                                                                                                                                                                >  1:613689‑M2/69‑72 (MQ=255)
                                                                                                                                                            gCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagca                                                                     <  2:248266‑M2/228‑158 (MQ=255)
                                                                                                                                                            ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagcc                                                                                                                                                                                                                               <  2:612709‑M2/7‑4 (MQ=255)
                                                                                                                                                                    gcTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgc                                                             >  1:242617‑M2/1‑63 (MQ=255)
                                                                                                                                                                       agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTa                                                           <  1:367734‑M2/171‑1 (MQ=255)
                                                                                                                                                                          aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTa                                                                                                                      >  2:659664‑M2/54‑165 (MQ=255)
                                                                                                                                                                          aatgaaatgactgagtcagccgagaagaattaccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAagag                                                       <  2:76318‑M2/175‑1 (MQ=255)
                                                                                                                                                                           atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTAt                                                                                                                     <  1:660735‑M2/113‑1 (MQ=255)
                                                                                                                                                                             gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTg                                                    >  2:535249‑M2/51‑228 (MQ=255)
                                                                                                                                                                                    aTTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc                                                                                                                                                                                <  1:626440‑M2/97‑51 (MQ=255)
                                                                                                                                                                                     ttCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                                                                                                                                               >  2:625442‑M2/1‑46 (MQ=255)
                                                                                                                                                                                       agtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACt                                                                                                                                                                              >  1:103928‑M2/41‑96 (MQ=255)
                                                                                                                                                                                        gtcagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTc                                                                                                                                                                             <  2:103777‑M2/57‑1 (MQ=255)
                                                                                                                                                                                          cagccgagaagaatttccccgcttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACGTGAc                                        <  1:536113‑M2/190‑1 (MQ=255)
                                                                                                                                                                                                agaagaatttccccgcttattcgcaccttccCTAATACTCAgg                                                                                                                                                                                                                          >  1:155170‑M2/32‑43 (MQ=255)
                                                                                                                                                                                                 gaagaatttccccgcttattcgcaccttccCTAATACTCAGGc                                                                                                                                                                                                                         <  2:154947‑M2/13‑1 (MQ=255)
                                                                                                                                                                                                        gTCACCTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgt                            <  2:496975‑M2/225‑199 (MQ=255)
                                                                                                                                                                                                             cTAAACCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccc                    >  1:497782‑M2/1‑22 (MQ=255)
                                                                                                                                                                                                               cttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATc                                                                                                                    >  1:52799‑M2/17‑130 (MQ=255)
                                                                                                                                                                                                               cttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCg                                                                                                       >  1:218840‑M2/17‑143 (MQ=255)
                                                                                                                                                                                                               aaaCCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                                                                                                                 <  2:167808‑M2/117‑98 (MQ=255)
                                                                                                                                                                                                                ttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCg                                                                                                                   <  2:52721‑M2/115‑1 (MQ=255)
                                                                                                                                                                                                                ttattcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCgg                                                                                                      <  2:218505‑M2/128‑1 (MQ=255)
                                                                                                                                                                                                                aaCCTGGCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                                                                                                >  1:168061‑M2/1‑19 (MQ=255)
                                                                                                                                                                                                                  attcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTAt                                                                                                                                                              >  1:290574‑M2/14‑85 (MQ=255)
                                                                                                                                                                                                                   ttcgcaccttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATc                                                                                                                                                             <  2:290111‑M2/73‑1 (MQ=255)
                                                                                                                                                                                                                      gCGATTTTGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccc                     <  1:422278‑M2/218‑206 (MQ=255)
                                                                                                                                                                                                                       cGATTTTGCTAAggaaggtgcgaacaagtccctgatttgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttacccc                    >  2:421592‑M2/1‑12 (MQ=255)
                                                                                                                                                                                                                          cttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAAc                                             >  2:407343‑M2/6‑190 (MQ=255)
                                                                                                                                                                                                                           ttccCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACg                                            <  1:408006‑M2/186‑1 (MQ=255)
                                                                                                                                                                                                                               cTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAgcgc  <  2:655680/228‑1 (MQ=255)
                                                                                                                                                                                                                                  aTACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCg                                                                                        >  2:197999/1‑139 (MQ=255)
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                
GCTAATATCAAAAAGTGCTTAAGGCACCGGATTTCGGGCGTTTAGGAAGATTTGAAATTGTTTTAGCGCAGCGGCAGTTTCATACTATGGCGGTAAAAAAATTTGCATGGTATTTAAGGACTCACTATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGC  >  NC_000913/2876455‑2876905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.