Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,100,7890GT21.3% 380.5 / 103.7 204intergenic (+2/+62)ycdZ/csgGDUF1097 family inner membrane protein/curli production assembly/transport outer membrane lipoprotein
Reads supporting (aligned to +/- strand):  ref base G (103/56);  new base T (29/14);  total (133/71)
Fisher's exact test for biased strand distribution p-value = 8.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.25e-03
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 211 total aligned reads displayed.

GATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTC  >  NC_000913/1100691‑1100887
                                                                                                  |                                                                                                  
 atatTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAggg                                                                                                   <  2:1157496/99‑1 (MQ=255)
  tatTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAGATAAAGCGTGAgggg                                                                                                  >  2:3110035/1‑99 (MQ=255)
    tttGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCa                                                                                                <  2:125014/99‑1 (MQ=255)
        gTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCa                                                                                            >  1:909025/1‑99 (MQ=255)
         ttACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCAc                                                                                           >  1:1742162/1‑99 (MQ=255)
         ttACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCAc                                                                                           >  1:168471/1‑99 (MQ=255)
           aCGCAATGAAAAACATTGGCCTGTGGCTGGCGGCGCGCAGTGCAAAAACGGCGAACCGTGAGCAGGAAATCAAAAATAAAGCGGGATGGGCACTCACGc                                                                                         >  2:1795253/1‑99 (MQ=255)
           aCGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGc                                                                                         <  1:867434/99‑1 (MQ=255)
           aCGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGc                                                                                         <  1:4410557/99‑1 (MQ=255)
            cGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCt                                                                                        <  2:4802178/99‑1 (MQ=255)
            cGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCt                                                                                        <  1:5077979/99‑1 (MQ=255)
            cGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCt                                                                                        <  1:1567625/99‑1 (MQ=255)
             gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCtt                                                                                       >  1:1516155/1‑99 (MQ=255)
             gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGAGAGGGGCAATCACGcat                                                                                       >  2:846312/1‑97 (MQ=255)
             gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATAAAAAATAAAGCGTGAGGGGCacgcacgcct                                                                                       >  2:2746560/1‑97 (MQ=255)
             gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCAAAGTGAGAAGGAAATAAAAAATAAAGCGTGAGGGGCACTCAAGCtt                                                                                       >  1:276063/1‑99 (MQ=255)
              cAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCttt                                                                                      >  1:393955/1‑99 (MQ=255)
              cAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCttt                                                                                      >  2:2481592/1‑99 (MQ=255)
               aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCttta                                                                                     >  1:2744656/1‑98 (MQ=39)
               aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                     >  1:573175/1‑99 (MQ=255)
               aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                     >  1:5217528/1‑99 (MQ=255)
               aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                     >  1:2146067/1‑99 (MQ=255)
               aaTGAAAAACAGTGGCCTGTGGCTCGCGGCGCGTAATGCAAAGACAGCGCACCGTGCGCAGGAAATCAAAAATAAAGCGCGAGGCGCCCTCCCGCATTc                                                                                     >  2:2921077/1‑99 (MQ=255)
                 tGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGc                                                                                   >  1:3990869/1‑99 (MQ=255)
                 tGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGc                                                                                   <  2:4380728/99‑1 (MQ=255)
                  gAAAAAGAGTGGCCTGGGGCTGGGGGCGCGTAGTGCAAAGACGGGGCACCGTGAGCAGTACATCAAAAATAAAGCGTGAGTGCCCCTCACGCtttattg                                                                                  <  2:4243241/99‑5 (MQ=25)
                  gAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCtttattt                                                                                  <  1:3153129/99‑5 (MQ=38)
                  gAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCt                                                                                  >  1:2885225/1‑99 (MQ=255)
                  gAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCt                                                                                  >  2:186352/1‑99 (MQ=255)
                  gAAAAACAGTGGCCTGGGCCTGGCGGCGTGTATTGCAACGACGTCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTTACGCTTTCGCt                                                                                  <  2:4981291/99‑1 (MQ=255)
                   aaaaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGGGAGCAGGAAACCAAAAATAAAGCGTGAGGGGAAGTCACGCTTTCGCtt                                                                                 >  2:4681600/1‑99 (MQ=255)
                    aaaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTa                                                                                >  2:1700387/1‑99 (MQ=255)
                     aaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaa                                                                               <  2:2107233/99‑1 (MQ=255)
                     aaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGAGTGAGGGGCACTCACGCTTTCGCTTaa                                                                               >  1:2510071/1‑99 (MQ=255)
                     aaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTCAGCAGGAAATCAAAAATAAAGCATGAGGGGCACTAACGCTTTAGATTaa                                                                               >  1:5274755/1‑99 (MQ=255)
                      aaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGTCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaaa                                                                              >  2:1026040/1‑99 (MQ=255)
                      aaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaaa                                                                              <  1:787389/99‑1 (MQ=255)
                      aaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaaa                                                                              <  2:3738111/99‑1 (MQ=255)
                      aaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaaa                                                                              <  1:2408037/99‑1 (MQ=255)
                        cAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACa                                                                            <  1:492624/99‑1 (MQ=255)
                             gCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTaaa                                                                       >  2:478268/1‑99 (MQ=255)
                              ccTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTaaaa                                                                      <  2:2999584/99‑1 (MQ=255)
                                 gtgGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGc                                                                   >  2:2721512/1‑99 (MQ=255)
                                 gtgGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGc                                                                   <  1:3247118/99‑1 (MQ=255)
                                     ctggcGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGga                                                               <  1:1863366/99‑1 (MQ=255)
                                       ggcggcGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGgatg                                                             >  1:2666083/1‑99 (MQ=255)
                                        gcggcgCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGgaatt                                                            >  2:4163159/1‑96 (MQ=255)
                                          ggcgCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATa                                                          >  1:1224862/1‑99 (MQ=255)
                                                tAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATCAAGCGAGAGCGGCACTCACGCTTTCGCTTAAATATTCAAATGCCGGACGATAAGTCCg                                                    >  2:2604658/1‑99 (MQ=255)
                                                  gTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGc                                                  >  2:1351678/1‑99 (MQ=255)
                                                  gTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACACACGCTTTCGCATTAACATTACAATGCCGGATGATAATTCCgcc                                                  >  2:2560296/1‑97 (MQ=255)
                                                  gTGCAAAGACGGCGCACCGTGAGCAGGAAAAAAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGc                                                  <  2:3219298/99‑1 (MQ=255)
                                                   tGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCAGTCACGCTTTCGCTTAAACAGTAAAATGCCGGATCATAATTCAGGCt                                                 >  2:1443105/1‑99 (MQ=255)
                                                   tGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCt                                                 >  1:4519737/1‑99 (MQ=255)
                                                    gCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGGGAGGGGCACTCACGCTTTCGCTTAAACTGTAAAATGCCGGATGATAGTTCCGGCtt                                                >  2:3829851/1‑99 (MQ=255)
                                                     cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCAGGCTTTCGCTTAAACAGTAAAATGCCGAATGATAATTCCGGCttt                                               >  1:4844498/1‑99 (MQ=255)
                                                     cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATCATAATTCCGGCttt                                               <  2:3938157/99‑1 (MQ=255)
                                                     cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGAGAGGGGCACTCACGCATTATCTTACACTGTATAATGCCGGAGGATAAGTCCGGCctt                                               >  2:2431813/1‑99 (MQ=255)
                                                       aaGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCttttt                                             <  1:4700505/99‑1 (MQ=255)
                                                        aGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCtttttt                                            <  2:2621520/99‑1 (MQ=255)
                                                        aGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCtttttt                                            <  2:1688147/99‑1 (MQ=255)
                                                            ggCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCt                                        >  1:4080973/1‑99 (MQ=255)
                                                             gcgcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTg                                       >  1:3412422/1‑99 (MQ=255)
                                                               gcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCATTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTc                                     >  1:3092525/1‑99 (MQ=255)
                                                                 aCCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAGATGCCGGATGGTAAATCCGGCTTTTTTATCTGTCAg                                   >  2:4889156/1‑99 (MQ=255)
                                                                 aCCGTGAGCAGGAAATCAAAAATAAAGCGGGAGGGCCACTCACGCTTTCGCGTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAg                                   <  2:946286/99‑1 (MQ=255)
                                                                          aGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGt                          >  1:2053018/1‑99 (MQ=255)
                                                                           ggAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTg                         >  2:1529279/1‑99 (MQ=255)
                                                                               aTCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGACTTTTTTATCTGTCAGGATTCCGGTGGAAc                     >  1:473323/1‑99 (MQ=255)
                                                                                tCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAcc                    <  2:1393316/99‑1 (MQ=255)
                                                                                tCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAcc                    <  1:2166352/99‑1 (MQ=255)
                                                                                 cgacaaTAACGCGTAAGGGGCACTCACGCTTTCGCTGCAACAGTACAATGCCGGATGATAATTCCGGCTTTTTTATCAGTCAGGATTCCGGTGCAACCg                   >  2:3357156/5‑99 (MQ=255)
                                                                                 cAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCg                   <  1:2795265/99‑1 (MQ=255)
                                                                                  aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                  >  2:2149278/1‑99 (MQ=255)
                                                                                  aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                  >  1:1044651/1‑99 (MQ=255)
                                                                                  aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                  >  1:1426807/1‑99 (MQ=255)
                                                                                  aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                  >  1:2044386/1‑99 (MQ=255)
                                                                                  aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                  <  1:4168195/99‑1 (MQ=255)
                                                                                  aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGAAACCGa                  >  1:1005568/1‑99 (MQ=255)
                                                                                    agcgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACa                >  2:3480081/5‑99 (MQ=38)
                                                                                    aaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACa                >  2:3869826/1‑99 (MQ=255)
                                                                                     gcgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat               >  2:279634/4‑99 (MQ=38)
                                                                                     aaTAAAGGGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat               <  2:758723/99‑1 (MQ=255)
                                                                                     aaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat               >  2:1951055/1‑99 (MQ=255)
                                                                                      cgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACata              >  1:2826901/3‑99 (MQ=38)
                                                                                      cgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACata              >  2:2671531/3‑99 (MQ=38)
                                                                                      aTAAAGCGTGCGGGGCACTCGCGCTTTCGCTTCTACAGTAAAATGCCGGATGATAATTAGGGTTTTTTTATCTGTCAGGATTCCGGTGGAACTGACata              >  2:66087/1‑99 (MQ=255)
                                                                                       gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAGATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACatat             >  1:5006802/2‑99 (MQ=38)
                                                                                       gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACatat             >  1:3662969/2‑99 (MQ=39)
                                                                                       gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACatat             >  1:2435305/2‑99 (MQ=39)
                                                                                       gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACatat             >  1:222770/2‑99 (MQ=39)
                                                                                        aaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATg            >  1:4633992/1‑99 (MQ=39)
                                                                                        aaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATg            >  1:3872116/1‑99 (MQ=39)
                                                                                        aaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTCATCTGTCAGGATTCCGGTGGAACCGACATATg            >  2:5179685/1‑99 (MQ=39)
                                                                                         aaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATgg           >  2:2244303/1‑99 (MQ=255)
                                                                                         aaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTATAAGAATAACGGTGGAACCGACATATgg           >  1:3537033/1‑99 (MQ=255)
                                                                                           gCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCg         <  1:4787409/99‑1 (MQ=255)
                                                                                            cGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCgg        <  1:669988/99‑1 (MQ=255)
                                                                                             gTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGt       >  2:4534628/1‑99 (MQ=255)
                                                                                              tGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTa      <  1:1329813/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
GATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTC  >  NC_000913/1100691‑1100887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑