Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,100,7930AC20.6% 398.8 / 120.9 214intergenic (+6/+58)ycdZ/csgGDUF1097 family inner membrane protein/curli production assembly/transport outer membrane lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (104/66);  new base C (31/13);  total (135/79)
Fisher's exact test for biased strand distribution p-value = 2.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.70e-02
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 216 total aligned reads displayed.

TTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTCACC  >  NC_000913/1100695‑1100890
                                                                                                  |                                                                                                 
   ggTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTc                                                                                                >  2:4701369/1‑99 (MQ=255)
    gTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCa                                                                                               >  1:909025/1‑99 (MQ=255)
     ttACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCAc                                                                                              >  1:168471/1‑99 (MQ=255)
     ttACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCAc                                                                                              >  1:1742162/1‑99 (MQ=255)
       aCGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGc                                                                                            <  1:867434/99‑1 (MQ=255)
        cGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCt                                                                                           <  1:5077979/99‑1 (MQ=255)
         gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCtt                                                                                          >  1:73332/1‑99 (MQ=255)
         gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGAGAGGGGCAATCACGcat                                                                                          >  2:846312/1‑97 (MQ=255)
         gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATAAAAAATAAAGCGTGAGGGGCacgcacgcct                                                                                          >  2:2746560/1‑97 (MQ=255)
         gCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCAAAGTGAGAAGGAAATAAAAAATAAAGCGTGAGGGGCACTCAAGCtt                                                                                          >  1:276063/1‑99 (MQ=255)
          cAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCttt                                                                                         <  2:2475530/99‑1 (MQ=255)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCttta                                                                                        >  1:2744656/1‑98 (MQ=39)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCttta                                                                                        <  1:4667354/99‑2 (MQ=39)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCttta                                                                                        <  1:2046446/99‑2 (MQ=39)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                        >  1:2146067/1‑99 (MQ=255)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                        >  1:5217528/1‑99 (MQ=255)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                        >  1:1489985/1‑99 (MQ=255)
           aaTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACAGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTc                                                                                        >  1:4546258/1‑99 (MQ=255)
           aaTGAAAAACAGTGGCCTGTGGCTCGCGGCGCGTAATGCAAAGACAGCGCACCGTGCGCAGGAAATCAAAAATAAAGCGCGAGGCGCCCTCCCGCATTc                                                                                        >  2:2921077/1‑99 (MQ=255)
            aTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGTGCCCCTCACGCtttat                                                                                       <  2:2700720/99‑3 (MQ=38)
             tGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGc                                                                                      >  1:3990869/1‑99 (MQ=255)
              gAAAAAGAGTGGCCTGGGGCTGGGGGCGCGTAGTGCAAAGACGGGGCACCGTGAGCAGTACATCAAAAATAAAGCGTGAGTGCCCCTCACGCtttattg                                                                                     <  2:4243241/99‑5 (MQ=25)
              gAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCt                                                                                     >  2:186352/1‑99 (MQ=255)
              gAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCt                                                                                     >  1:2885225/1‑99 (MQ=255)
              gAAAAACAGTGGCCTGGGCCTGGCGGCGTGTATTGCAACGACGTCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTTACGCTTTCGCt                                                                                     <  2:4981291/99‑1 (MQ=255)
               aaaaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGGGAGCAGGAAACCAAAAATAAAGCGTGAGGGGAAGTCACGCTTTCGCtt                                                                                    >  2:4681600/1‑99 (MQ=255)
                aaaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGGGGGGCACTCACGCTTTCGCTTa                                                                                   <  2:1655146/99‑1 (MQ=255)
                aaaaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTa                                                                                   >  2:1700387/1‑99 (MQ=255)
                  aaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGTCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaaa                                                                                 >  2:1026040/1‑99 (MQ=255)
                  aaCAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTaaa                                                                                 <  2:3738111/99‑1 (MQ=255)
                     aGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGAACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAg                                                                              <  1:4948295/99‑1 (MQ=255)
                             gtgGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGc                                                                      <  1:3247118/99‑1 (MQ=255)
                                 ctggcGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGga                                                                  <  1:1863366/99‑1 (MQ=255)
                                  tggcGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGgat                                                                 <  1:4442452/99‑1 (MQ=255)
                                   ggcggcGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGgatg                                                                >  1:2666083/1‑99 (MQ=255)
                                    gcggcgCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGgaatt                                                               >  2:4163159/1‑96 (MQ=255)
                                      ggcgCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATa                                                             >  1:1224862/1‑99 (MQ=255)
                                          cgTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTc                                                         <  1:3828453/99‑1 (MQ=255)
                                           gTAGTGCAAAGACGGCGCACCGTGAACAGGAAATCAAAAATAAAGCAAGAGGGGCACACACGCTTTGGCTTAAACAGTAAAATGCCGGAGGATAATTcc                                                        >  2:4851867/1‑99 (MQ=255)
                                            tAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATCAAGCGAGAGCGGCACTCACGCTTTCGCTTAAATATTCAAATGCCGGACGATAAGTCCg                                                       >  2:2604658/1‑99 (MQ=255)
                                            tAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCg                                                       <  1:4353928/99‑1 (MQ=255)
                                              gTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGc                                                     >  2:1351678/1‑99 (MQ=255)
                                              gTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACACACGCTTTCGCATTAACATTACAATGCCGGATGATAATTCCgcc                                                     >  2:2560296/1‑97 (MQ=255)
                                              gTGCAAAGACGGCGCACCGTGAGCAGGAAAAAAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGc                                                     <  2:3219298/99‑1 (MQ=255)
                                                gCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGGGAGGGGCACTCACGCTTTCGCTTAAACTGTAAAATGCCGGATGATAGTTCCGGCtt                                                   >  2:3829851/1‑99 (MQ=255)
                                                 cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATACAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCttt                                                  >  1:3477968/1‑99 (MQ=255)
                                                 cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCttt                                                  >  1:4701363/1‑99 (MQ=255)
                                                 cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCttt                                                  >  1:4773641/1‑99 (MQ=255)
                                                 cAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATCATAATTCCGGCttt                                                  <  2:3938157/99‑1 (MQ=255)
                                                  aaaGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCtttt                                                 >  1:2207505/1‑99 (MQ=255)
                                                    aGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCtttttt                                               <  2:1688147/99‑1 (MQ=255)
                                                    aGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCtttttt                                               <  2:2621520/99‑1 (MQ=255)
                                                     gACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTa                                              <  1:3933091/99‑1 (MQ=255)
                                                        ggCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCt                                           >  1:3586173/1‑99 (MQ=255)
                                                         gcgcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAACCAGTAAAATGCCGGATGCTAATTCCGGCTTTTTTATCTg                                          >  1:5274786/1‑99 (MQ=255)
                                                         gcgcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTg                                          >  1:3412422/1‑99 (MQ=255)
                                                         gcgcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTg                                          >  1:2270485/1‑99 (MQ=255)
                                                           gcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTc                                        <  1:189907/99‑1 (MQ=255)
                                                           gcACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCATTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTc                                        >  1:3092525/1‑99 (MQ=255)
                                                             aCCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAg                                      >  2:1742297/1‑99 (MQ=255)
                                                             aCCGTGAGCAGGAAATCAAAAATAAAGCGGGAGGGCCACTCACGCTTTCGCGTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAg                                      <  2:946286/99‑1 (MQ=255)
                                                              tcGTGAGCAGAAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTATCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAgg                                     >  2:4794591/2‑99 (MQ=255)
                                                                       ggAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGTCGGATGATAATTCCGGCTTTTTGATCTGTCAGGATTCCGGTg                            <  1:4117140/99‑1 (MQ=255)
                                                                       ggAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTg                            >  2:1529279/1‑99 (MQ=255)
                                                                        gAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTgg                           <  1:2428238/99‑1 (MQ=255)
                                                                           aTCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAc                        >  1:4793343/1‑99 (MQ=255)
                                                                            tCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAcc                       <  2:1393316/99‑1 (MQ=255)
                                                                            tCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAcc                       <  1:1521753/99‑1 (MQ=255)
                                                                             cgacaaTAACGCGTAAGGGGCACTCACGCTTTCGCTGCAACAGTACAATGCCGGATGATAATTCCGGCTTTTTTATCAGTCAGGATTCCGGTGCAACCg                      >  2:3357156/5‑99 (MQ=255)
                                                                             cAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCg                      <  1:2795265/99‑1 (MQ=255)
                                                                              aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                     >  1:1044651/1‑99 (MQ=255)
                                                                              aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGa                     >  1:1426807/1‑99 (MQ=255)
                                                                              aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGAAACCGa                     >  1:1005568/1‑99 (MQ=255)
                                                                              aaaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATAATAATTCCGGCTTTTTTATCTGTCAGGATTCAGGTGGAACCGa                     >  1:2494341/1‑99 (MQ=255)
                                                                              aaaaaTAAAGCGTGAGGGGCACATAATCTTACGCTTAAACAATAAAATGCGGGATGATAATTCAGGCTTTTTTATCTGTCAGAATTCCGGTGGAAccaa                     >  2:2135758/1‑97 (MQ=255)
                                                                               aaaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGAc                    <  2:3008724/99‑1 (MQ=255)
                                                                                agcgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACa                   >  2:3480081/5‑99 (MQ=38)
                                                                                aaaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACa                   >  2:3869826/1‑99 (MQ=255)
                                                                                 gcgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat                  >  1:5258853/4‑99 (MQ=38)
                                                                                 gcgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat                  >  2:279634/4‑99 (MQ=38)
                                                                                 aaTAAAGGGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat                  <  2:758723/99‑1 (MQ=255)
                                                                                 aaTAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACat                  >  2:1951055/1‑99 (MQ=255)
                                                                                  cgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACata                 >  1:2826901/3‑99 (MQ=38)
                                                                                  cgaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACata                 >  2:2671531/3‑99 (MQ=38)
                                                                                  aTAAAGCGTGCGGGGCACTCGCGCTTTCGCTTCTACAGTAAAATGCCGGATGATAATTAGGGTTTTTTTATCTGTCAGGATTCCGGTGGAACTGACata                 >  2:66087/1‑99 (MQ=255)
                                                                                   gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACatat                >  1:4859230/2‑99 (MQ=39)
                                                                                   gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACatat                >  1:647204/2‑99 (MQ=39)
                                                                                   gaaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTAAGGATTCCGGTGGAACCGACatat                >  2:1292645/2‑99 (MQ=38)
                                                                                    aaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATg               >  2:2168509/1‑99 (MQ=39)
                                                                                    aaaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTCATCTGTCAGGATTCCGGTGGAACCGACATATg               >  2:5179685/1‑99 (MQ=39)
                                                                                     aaGCGTGAGTGCCCCTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATgg              >  2:2244303/1‑99 (MQ=255)
                                                                                     aaGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATgg              <  2:1249154/99‑1 (MQ=255)
                                                                                     aaGCGTGAGGAGCACTCAAGCTCGCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTTAGGATTCCGGTGGAACCGACATATgg              <  2:2077829/99‑1 (MQ=255)
                                                                                         gTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGt          >  2:4534628/1‑99 (MQ=255)
                                                                                          tGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTa         <  1:1329813/99‑1 (MQ=255)
                                                                                             ggggCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTAttt      <  1:2606966/99‑1 (MQ=255)
                                                                                               ggCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTCa    >  2:4404062/1‑99 (MQ=255)
                                                                                               ggCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTCa    <  1:3998745/99‑1 (MQ=255)
                                                                                                gCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTCAc   <  1:3191023/99‑1 (MQ=255)
                                                                                                gCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTCAc   <  2:1457813/99‑1 (MQ=255)
                                                                                                  |                                                                                                 
TTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACTCACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGCGGTATTTCACC  >  NC_000913/1100695‑1100890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑