New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 225456 = | 72 (0.500) | 12 (0.090) | 11/314 | 5.5 | 15.0% | noncoding (76/77 nt) | ileV | tRNA‑Ile |
? | NC_000913 | = 3427056 | NA (NA) | intergenic (‑23/+20) | alaU/ileU | tRNA‑Ala/tRNA‑Ile | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
AACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTAGAGGTTTTACTGCTCATTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTT > NC_000913/3426840‑3427271 | aattttCGTGGTTCAGTGTGTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATTACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTgg < 2:1690078/236‑1 (MQ=0) gaaccAGATTTTTAAAGAGCAAAACTTCGCAGTGAATCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCTCTACAGAGATGGTGGATCTATGCGGGATCGAACCGCAGTCCTCCTGCGTTCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCAcc < 2:1806070/236‑1 (MQ=0) cttcAGGGATGGTGGATCTATCCGGGATCGAACCACTGACCTCCGGCGTGCAAACCCGGCGCTCTCCCAGCTGGGCTATAGCCCCATATCATGTAGTAAAAACCTCTTCAAATTTCCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGACCCACCGCCCTCACCCTTATCAGGGGTGCGCACTAACCCCCTGAGCTACAAGCCTGTAGAGGTTTTACTGCTCATTTTCATCAGACAATc < 2:861376/236‑1 (MQ=1) tcgcccAGCTGCGCTATAGCCCCATAACATGTAGTTAAACCCTCTCAAAATTTGCCTGGCAAATTTGGCGGCCCTTAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTAGAGGTTTTACTGCTCATTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTccc < 2:907933/235‑1 (MQ=1) cataactgttAGTTAAAACCCTGTCAAATTTGCCTTGCAAATTTGTTCGGCCTGAGTGAACTTGACCCCCCGCCCTCACCCTGATCAGGGTTGCGCTCTAACCACCGGGGCTACAGGCCTGTAGAGGTTTTACAGCTCATTTTCATCAGACAATCTGGGTGAGCACTGCTAAGTACGCTTATTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACtt < 2:1741144/230‑1 (MQ=1) | AACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCCATAACATGTAGTTAAAACCTCTTCAAATTTGCCGTGCAAATTTGGTAGGCCTGAGTGGACTTGAACCACCGACCTCACCCTTATCAGGGGTGCGCTCTAACCACCTGAGCTACAAGCCTGTAGAGGTTTTACTGCTCATTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTT > NC_000913/3426840‑3427271 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |