| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 825,235 | 0 | T | A | 30.5% | 76.8 / 21.5 | 61 | M292L (ATG→TTG) | ybhR | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (27/14); new base A (3/15); total (30/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.31e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCC > NC_000913/825003‑825462 | tACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCCTAAAGAc > 1:75408/1‑239 (MQ=255) aCATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGGGAATGGCGGGGACCAAAAAAACa > 1:593985/1‑239 (MQ=255) ccTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCAAAAGACAAaaac > 1:1589613/1‑238 (MQ=255) aaaCATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAAACACCCC‑GCTAAAc > 1:630218/1‑238 (MQ=255) cgcgTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGCCTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACACC‑GGTAAAAGCct > 1:111865/1‑236 (MQ=255) cctgtGTCGTGGCCGTAACCACCAGTGGCGACCACAAACTATACCCAAAATTATCCGTACCGGCATCATT‑AAATAAATGCTGCGTGGTAATGTCCGAAAAGGGACAAATAGGGTTAAACCAGGTCGGTTTTGGCAGCCGTACCGGCATTTTTCCCACCGGAAAACCGTAACAGAAAAGGAGAAGGGGGGGCATAATAAAGACAACCACGCC‑GATAAACGCCTGCTGTTGTGTTGAACa < 2:111865/234‑1 (MQ=255) ggCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCATGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCCTAAAGACAAACACCCC‑GAAAAAACCCTTCTTTTGGGTTGAAAAGAGggagaaaa > 1:2089221/1‑234 (MQ=255) ggCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCACCATAAAGACAAACAAGCC‑CCAAAACGCCTGATGTTGTGTTGTACAAAGGGGTGaaa > 1:1444758/1‑239 (MQ=255) gCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCC‑GATAAAAGCCCGCTGTTGTGTTGAACAGAGGGATGaaa > 1:499899/1‑238 (MQ=255) ttATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCC‑GATAAACGCCTGCTGTTGTGTTGAACACAGTGATGAAaacaac > 1:1576129/1‑239 (MQ=255) tAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCCGCTGTTGTGTTGAACAAAGGGATGAAATCAACAAACCGAAt > 1:329016/1‑238 (MQ=255) agcgtgaacaAACGACTCCAAACAATACCCGTACTCGTATCCTTAAAATAGAT‑CTGCTGGGTAATGACCTTAAAGTGGCGAAGAGGGTTATTCCACTGCATGTTTAGCATCCGTCGCGGCATGTTTCCCACCGGCGAAACGGAACTGAAAAGAAGATGGGCGGTAATGAGAAAAAAAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGCCCGaa < 2:1505664/229‑1 (MQ=255) ttCCACAAAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGTTTGGAAATTTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTACCCGGAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGaa < 1:842079/207‑1 (MQ=255) ttatcagatcTCGCATCTTGAAAATATAT‑CGGCTTGGTAATGTCCGAAAGGGGGCGAATAGGGTAAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTACCCCCGGAGAAACGTAACGGAAAAGGAGAATGGCGGGCAAAAAAAAGAAAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAc < 2:630218/230‑1 (MQ=255) ataccaaGACTCTCATCCTTCAAATAAAT‑CTGCTTGTTAAGCGCCGCAAAGTGTCGAATATGGTTACTCCACGGCAGGTGGTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCAc < 2:1139591/233‑1 (MQ=255) tCCAGCCTCGCATCCTTAAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCCCCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGAAAAACACGCC‑GATAAACGCctgctg < 1:749013/173‑1 (MQ=255) cATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCATAAAGGCAAAAACCCCGGATAACCCCCGGC‑GTTGTGGTGaa > 2:749013/1‑173 (MQ=255) aaaaaat‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCACCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGAAAAGGAGAAGGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCtgttgtg < 1:1640131/156‑1 (MQ=255) cTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCATAAAGACAAAAACGCC‑GAGAAAACGCTGCTGTTGTGTTGAACagag > 2:1640131/1‑159 (MQ=255) gTAATGTCCGTAAGGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATTTTTTCCACCGGAAAAACGTAACCGGAAAGGAGAATGGCGGGCTTCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGaa < 1:314979/239‑1 (MQ=255) tCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGAAAAAAACGCC‑GATAAACCCCTGCtgttgtgtt > 1:176404/1‑141 (MQ=255) tCCGTAAAGGGGCAAATAGGGTTAACCCACGTCAGTTTTTGCAGCCATCCCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAAGGGGGGGCATCATAAAGACAAACACGCC‑GATAAAc < 2:148304/126‑1 (MQ=255) tAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAAAAGCGCCAGCGATCCGGCGTAGGGTATTTGa > 1:1498018/1‑239 (MQ=255) ggCGAATGGGTTTAATCCACGTCAGTTTTTGCAGCCATCCCGGCATGTTTTCCCCCGGAAAAACGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATa < 1:1228598/235‑1 (MQ=255) ggCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCtgtt > 1:148304/1‑126 (MQ=255) gggAATAGGGTGAAACCCGTTGAGGTTTTGGAGCAATACGGGCATGTTTACCACCGGAGAAACGTAACCGAAAAGGGGAAGGGGGGGAATAAAAAAGAAAAACACGCC‑GATAAACGCctg < 2:1245331/118‑1 (MQ=255) cGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGGATCATAAAAACAAAAACCCA‑GCAAAACACCCGTCGTGTGGTTTAACACAGGGATGAAAAAAAACAACAGAAACCCACCACCCATAAACCAAAAAACAACAACCTAAACTAGAAAACAGCCAGCCATCCGGCGAAGGGGACTTTATACgaaca > 2:977816/1‑235 (MQ=255) gtaaacacACGTAATGTTGTCCAGCCATACCGGCATGTTTTCCACCGGAGAACCGTAACCGGAAAGGAGAATGGGGGACATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATGCGCCCCGATACCa < 2:1589613/231‑1 (MQ=255) ttAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGAc > 1:1428024/1‑145 (MQ=255) ttAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑CATAAACGCCCTCtgttgggtt > 1:1245331/1‑120 (MQ=255) aTCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCg > 1:436529/1‑238 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGcatcat < 2:1717168/75‑1 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGcatcat > 1:1717168/1‑75 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATa < 1:236980/76‑1 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATa > 2:236980/1‑76 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGaa > 2:895367/1‑115 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGaa < 1:895367/115‑1 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGGGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGc > 1:1271939/1‑238 (MQ=255) cGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGGGATGAAATCAACAGAACGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATAACAATCGCCAGca > 1:1967350/1‑239 (MQ=255) cGTCAGGTTTGGCAGCCTACCCGGCATGTTTCCCACGGGAGAAACGTAACGGGAAAGGAGAATGGCGGGAATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGca < 1:284135/239‑1 (MQ=255) ttttGCAGCAATCCCGGATTGTTTCCCACCGGAAAAACGTAACCGAAAAGGAAAATGGCGGGAATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtg < 1:834980/237‑1 (MQ=255) ttttGCAACCATACCGGAGTGTTTTCCACCGGAAAAGCGTAGCCGGAAAGGAGAATGGCGGGCATCATAAAAAAAAACACGCC‑GATAAACGCCTGCGGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAg < 2:1011943/179‑1 (MQ=255) ccATACCGGCATTTTTTCCACCGGAGAAACGTACCCGGAAAGGAGAAGGGGGGGCATCAAAAAGACAAACACGCC‑GATAAACGCCTGCtgttgt < 1:1423391/94‑1 (MQ=255) aTACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAAACAAACCCCCC‑GATAAACGCCTGCTGTTTTGTTGAACAGAGGGATGAAATCAACAGACCGAATCCCACCACCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGAt > 1:1011943/1‑179 (MQ=255) aTGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAAACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACaga > 2:1423391/1‑94 (MQ=255) ttttCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCACCATAAAGAAAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGcc < 1:475241/192‑1 (MQ=255) ttttCCACCGGAAAACCTTACCCGAAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATa < 1:2064171/188‑1 (MQ=255) cgaggaAACGTACCCGGAAAGTAGAATGGCGGGCATCAAAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGAt < 1:1284515/170‑1 (MQ=255) cGGAGAAACGAACCGGGAAGGGAAAAGGGGGGGAAAAAAAAAAACAACCACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGc < 1:752148/237‑1 (MQ=255) gagaAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAAAACGCC‑GATAAACGCCTGCTGTTGTGTTTAACAGAGTGATGAAATCAACAGACCGAATCCCCCCAGCGATAAAACATAAAATACCCACGGAAAGGAGAACAACGCCCGGGGTCCGGGGGAGGGGATTTGATACGCCCAGATa > 2:2064171/1‑188 (MQ=255) aaCGAAACGGAAAGGGAGAAGGGCGGTCATCAAAAAGAAAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAAc < 2:1349778/116‑1 (MQ=255) cGTAACCGGAAAGGAGAATGGCGGGCATCAAAAAGACAAACACGCC‑GGTAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCa < 1:1327254/185‑1 (MQ=255) gAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAAAAAAGGGATGAAATCAACAGAACGAATCCCACCAGCGATAAACCATAAATCAc > 1:1349778/1‑116 (MQ=255) aaaaGGAAAATGGAGAGAACCAGAAAAACAACCACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCGCCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGc < 1:1159746/234‑1 (MQ=255) aaaGGAGAATGGGGGGAATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGAt < 1:388449/238‑1 (MQ=255) aaaGAAGAATGGCGGGCATCATAAAGACAAACACGCC‑TATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCCACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATg < 1:1669230/239‑1 (MQ=255) aaGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCa < 2:705794/106‑1 (MQ=255) aaGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCa > 1:705794/1‑106 (MQ=255) aaGGAGAATGGCGGGCATCATAAAAACAAACACGCC‑GGTAAACGCCTGCCGTTGTGTTGAACAGAGTGATGAAAACAACAGACCGAAACCCACCAGCGCTAAACCATAAATCACCCACGTAAAACAGAAAAGCGCCAGCGATCCGGCGACGGGGACTTGATACCCCCAGAAACCAAACGCCAAca > 2:1327254/1‑185 (MQ=255) aGGAGAATGGCGGGAATAAAAAAAAAAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGaa < 2:436529/239‑1 (MQ=255) gagaATGGCGGGCATCATAAAGACAACCACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAAtg < 1:209408/187‑1 (MQ=255) aaTGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAAAAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCaa > 1:333740/1‑170 (MQ=255) gggggAATCATAAAAACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGcc < 1:1268994/236‑1 (MQ=255) gcggaaatcatAAACACAACCACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGc < 1:650231/231‑1 (MQ=255) | TACATCACCTTACGTCTAAACATCGCGTACGCCGCTGACCCTGTCGTGGCCGTTATCACCAGTAGCGGCCACAAACTATTCCACACAATATCCAGACTCGCATCCTTCAAATAAAT‑CTGCTTGGTAATGTCCGTAAAGTGGCGAATAGGGTTAATCCACGTCAGGTTTTGCAGCCATACCGGCATGTTTTCCACCGGAGAAACGTAACCGGAAAGGAGAATGGCGGGCATCATAAAGACAAACACGCC‑GATAAACGCCTGCTGTTGTGTTGAACAGAGTGATGAAATCAACAGACCGAATCCCACCAGCGATAAACCATAAATCACCATCGTAAAGTAGAACAGCGCCAGCGATCCGGCGAAGGGGATTTGATACGCCCAGATACCAATCGCCAGCACAATGGTGGCCTGGAAGGTGGCGACAATTAACGCCGGTACGGCTTTGCCGATGAAGATCTGCC > NC_000913/825003‑825462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |