| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 4,188,959 | Δ9 bp | 100% | coding (3611‑3619/4224 nt) | rpoC → | RNA polymerase, beta prime subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4188959 | 4188967 | 9 | 94 [0] | [0] 94 | rpoC | RNA polymerase, beta prime subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4188958 | 0 (0.000) | 81 (1.110) | 63/262 | NT | 100% | coding (3610/4224 nt) | rpoC | RNA polymerase, beta prime subunit |
| ? | NC_000913 | 4188968 = | 0 (0.000) | coding (3620/4224 nt) | rpoC | RNA polymerase, beta prime subunit | |||||
AATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACAT > NC_000913/4188810‑4189106 | aaccctggCTGAACTCAGGGGTCTCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGACGAGATGATGCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTG < 2:562205‑M1/146‑1 (MQ=255) aTCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGg < 1:885888‑M1/149‑2 (MQ=255) aTCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGg > 1:201071‑M1/1‑148 (MQ=255) cTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtga < 1:1022464‑M1/149‑5 (MQ=255) cTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtga > 1:858458‑M1/1‑145 (MQ=255) cTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtga < 1:432889‑M1/149‑5 (MQ=255) tGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGATGGAAGCTGAACGTGctgac > 2:1220227‑M1/1‑144 (MQ=255) aaaTCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatt < 2:933869‑M1/149‑12 (MQ=255) aGCGGTATCTGTTCCTTCGGTAAAGAAACCAAAGGTAAGCGTCGTCTGGTTATCCCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGTTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccga < 2:1229657‑M1/149‑17 (MQ=255) gatCGTTTCCTTCTGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtc < 2:1219331‑M1/148‑22 (MQ=255) ttCCCTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAACTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaag < 1:200160‑M1/149‑28 (MQ=255) tCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagc < 2:1175624‑M1/149‑29 (MQ=255) acctTCGGTAAAGAACCCAAAGGTAAGCGTCGTCTGGTGATGCCCCCGCTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagc < 2:1312700‑M1/148‑29 (MQ=255) ccTTCGGTAAAGAAACCAAAGGTCAACGTCGTCTGAATATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcg < 2:478550‑M1/149‑30 (MQ=255) cTTCGGTAAAGAAACCAAAGGTAAACGTCGTCGGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgc < 2:297632‑M1/149‑31 (MQ=255) tCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccg < 2:635381‑M1/149‑33 (MQ=255) cGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgc < 1:1126465‑M1/149‑34 (MQ=255) gTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGGAGGTGAACGTGgggacgtaacttccgacggtccggacgcgcagcac > 2:135441‑M1/1‑114 (MQ=255) tAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcaca > 1:277997‑M1/1‑113 (MQ=255) aaaCCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacatt < 1:434659‑M1/149‑42 (MQ=255) aaaCCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGCGgtgacgtactttccgacggtccggaagcgccgcacgacatt > 1:49624‑M1/1‑108 (MQ=255) aCCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattct > 1:536684‑M1/1‑106 (MQ=255) ccAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctg < 2:201071‑M1/149‑45 (MQ=255) ccAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattcccgacggtccggaagcgccgcacgacattctg > 2:1205319‑M1/1‑105 (MQ=255) cAAATGTAAACGTCGTCTGTTTATCACCCCGGTAGACGGTAGCGATCCCTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgc < 1:1008407‑M1/149‑46 (MQ=255) cAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgc > 2:1117444‑M1/1‑104 (MQ=255) aaaGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcg < 2:270016‑M1/149‑47 (MQ=255) aaaGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGACCGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcg > 1:932638‑M1/1‑103 (MQ=255) aGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGGGgtgacgtaatttccgaccgtgcggaagcgccgaccgacattctgcgtc > 2:564756‑M1/1‑101 (MQ=255) gTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttcggacggtccggcagcgctgcacgagattgtgcgtctg > 1:1073686‑M1/1‑99 (MQ=255) aaCGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgt < 1:355865‑M1/149‑54 (MQ=255) aaCGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgt < 1:963517‑M1/149‑54 (MQ=255) ccggttATCACCCAGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGGGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttca < 1:688127‑M1/147‑62 (MQ=255) cTGGTTATCACCCCGGTAGACGGTAGCGTTCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgttatgttca < 2:568056‑M1/149‑62 (MQ=255) gTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCGCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgc > 2:956451‑M1/1‑85 (MQ=255) aTCCCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGGGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgt < 1:153587‑M1/149‑68 (MQ=255) aTCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgt < 1:1218038‑M1/149‑68 (MQ=255) cACCCCGGAAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgttacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgtta < 1:478572‑M1/149‑70 (MQ=255) aCCCCGGTAGACGGTAGCGCTCTGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttac > 2:1308391‑M1/1‑79 (MQ=255) aCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtgatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggggttcatgccggtgc > 2:360839‑M1/1‑79 (MQ=255) aCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttac > 1:1062745‑M1/1‑79 (MQ=255) aCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttac > 2:839452‑M1/1‑79 (MQ=255) ccccGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcatgacattctgcgtcggcgtggtgttgatgctgttact > 2:551628‑M1/1‑78 (MQ=255) ccccGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttact > 1:548515‑M1/1‑78 (MQ=255) ccccGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgactgcgtggtgtccatgctgttact > 2:579684‑M1/1‑78 (MQ=255) cccGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactc < 1:1239711‑M1/149‑73 (MQ=255) cccGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcggggtgttcatgctgttactc > 1:1164942‑M1/1‑77 (MQ=255) ccGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcg < 1:832281‑M1/149‑74 (MQ=255) cGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgt < 1:1301044‑M1/149‑75 (MQ=255) gTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttcctcgtta > 1:838357‑M1/1‑73 (MQ=255) tAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttac > 2:662129‑M1/1‑72 (MQ=255) ggTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacgatccggaagcgccgcacgacattctgcgtctgcttggtgttcatgctgttactcgttacatcgt > 2:978512‑M1/1‑67 (MQ=255) gCGATTCGTCCTACGAGATGATTCCGCAATGGGGTCAGCTCAACGTGTGTGAAGCTGAACGTGgtgacgtaatttccgacggtccggactcgccgcacgacattatgcgtctgcgtggtgttcatgctgttactcgttacatcgttaac < 2:412632‑M1/149‑87 (MQ=255) cGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggcagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacg < 2:976956‑M1/149‑88 (MQ=255) cGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacg > 2:175812‑M1/1‑62 (MQ=255) cGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGGGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtgggttccatgctgttactcgttccatggctaacg > 1:1158728‑M1/1‑62 (MQ=255) aTCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaa < 1:1250092‑M1/149‑90 (MQ=255) tCCGTACGAAGAGAGTATTCCGAAAGGGCGTCAGCCCAACGTGTTCGAAGGGGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgccgttactcgttacatcgttaacgaag < 2:686260‑M1/149‑91 (MQ=255) cGTACGAAGAGCTGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagta < 2:56648‑M1/149‑93 (MQ=255) gagaTGATTCCGAAATGGCGTCAGCTCAACGTGCTCGAAGGTGAACGTGatgacgaaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttacgcgttacatcgttaacgacgtaccggacgt > 2:864929‑M1/1‑49 (MQ=255) gagaTAATTCCGGAATGGCGTCAGCTCAACGTGTTCGGAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgt < 2:206957‑M1/149‑101 (MQ=255) atgatTCCGAAATGGCGCCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtata < 1:1172285‑M1/149‑104 (MQ=255) atTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccg > 2:1027591‑M1/1‑43 (MQ=255) ttCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgt > 1:1078314‑M1/1‑42 (MQ=255) ttCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgt > 1:798766‑M1/1‑42 (MQ=255) ttCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacgggccggaagcgccgcacgacattctgcgtctgcgtggggttcatgctgttactcgttacatcgttgacgaagtaccggacgtatgccgt > 2:538027‑M1/1‑42 (MQ=255) cGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctg < 1:1078062‑M1/149‑111 (MQ=255) cGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacagtctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctg < 1:1144285‑M1/149‑111 (MQ=255) tGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcaggg > 1:611498‑M1/1‑34 (MQ=255) tGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcggctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcaggg < 2:76685‑M1/149‑116 (MQ=255) ggCGTCAGCCCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggc < 1:202816‑M1/149‑117 (MQ=255) gCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtccgcagcgcg > 2:63248‑M1/1‑32 (MQ=255) gCGTCAGCTCAACGTGTTCGAAGGGGAACGTGgcgacgtacttacaatcgggccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcg < 1:104930‑M1/149‑118 (MQ=255) cGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgt > 1:9422‑M1/1‑31 (MQ=255) gTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtt > 2:1343746‑M1/1‑30 (MQ=255) tCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtta > 1:179830‑M1/1‑29 (MQ=255) cAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaa < 1:1117444‑M1/149‑122 (MQ=255) cAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacaccgttaacgaagtacaggacgtataccgtctgcagggcgttaa < 1:729157‑M1/149‑122 (MQ=255) gCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaaga < 1:1187198‑M1/149‑124 (MQ=255) aaCGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaa < 2:1168134‑M1/149‑128 (MQ=255) cGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacg < 1:126309‑M1/149‑130 (MQ=255) gttgtcgaaGGTGACCGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacga < 1:502602‑M1/145‑131 (MQ=255) gtgtTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacga < 1:662129‑M1/149‑131 (MQ=255) tCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaa < 2:242633‑M1/149‑135 (MQ=255) gcgAAGGTGAACGTGgtgacggaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaa < 2:49624‑M1/148‑135 (MQ=255) gagggtgaCCGTGgtgacgtaatctccgacggtccgcacgcgccgccagacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaatgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaaca < 1:94123‑M1/146‑137 (MQ=255) gAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacattgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacc > 2:252493‑M1/1‑13 (MQ=255) gAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgatcaaca > 1:438720‑M1/1‑13 (MQ=255) gAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaaca > 2:1174980‑M1/1‑13 (MQ=255) gTGAACGTGgtgacgtaatttccgaaggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtatacagtctgcagggcgttaagattaacgataaacacatc > 1:755102‑M1/1‑9 (MQ=255) gAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtccaggacgtataccgtctgcagggcgttaagattaacgataaacacatcga > 2:640979‑M1/1‑7 (MQ=255) aaCGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaa < 1:929812‑M1/149‑144 (MQ=255) aaCGGGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaa < 2:1255929‑M1/149‑144 (MQ=255) ggtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgacgttgt > 2:771244‑M1/1‑1 (MQ=255) | AATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACAT > NC_000913/4188810‑4189106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |