| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,614,424 | T→A | 6.7% | intergenic (+163/+257) | yjjV → / ← yjjW | putative DNase/putative pyruvate formate lyase activating enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,614,424 | 0 | T | A | 6.7% | 289.2 / 4.5 | 112 | intergenic (+163/+257) | yjjV/yjjW | putative DNase/putative pyruvate formate lyase activating enzyme |
| Reads supporting (aligned to +/- strand): ref base T (49/50); new base A (3/5); total (53/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
CACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATA > NC_000913/4614277‑4614572 | cccgccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTc < 1:928415/147‑1 (MQ=255) aCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcg < 1:426925/149‑1 (MQ=21) ccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGt < 1:587627/149‑1 (MQ=255) aTCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTa < 1:900483/149‑1 (MQ=255) tCCGGCAGTTGGCGCACAATGCCTGATGGGACGCTTGAGGCGTCTTATCGTGCCGACAGGGTTGTGCCGAACCGTAGGCCGGGTGAGGCGTTCACGCCGCATCCGGCAGTTGGCGCGCAATGCCTGATGCGACGGTTGTCGAGTCTTAt > 2:1040340/1‑149 (MQ=14) ggCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCAt < 2:225552/149‑1 (MQ=255) gCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGTTGGCGCAGAATGCCGGATGCGACGCGTGTCGCGTCTTATCATg > 1:880549/1‑149 (MQ=255) cggTTGGCGCCCACTGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCCACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGc < 2:721440/147‑1 (MQ=255) cAGTGGGCGCACAACGCCGGAGGCGACGCTCACCGCTTCTTATCATGCCCACAGGTTTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGc < 2:589937/149‑1 (MQ=14) ttGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTAACAGTAGGCCGCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGCCTTATCATGCCTa < 1:924711/149‑1 (MQ=14) ggCGCACACTGCGGGTTGCGACGCGTAACGCGTCTTATCCTGCCGATAGGTTTGGGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACa < 2:142161/149‑1 (MQ=14) ggCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTCATGCGACGCTTGTCGCGTCTTATCCTGCCTACa < 1:989308/149‑1 (MQ=255) gcgcACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACaa > 1:1303995/1‑149 (MQ=255) gcACAATGCCTGATGCGCCGCGTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTACGGGGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGt < 2:538182/149‑1 (MQ=14) acaATGCCTGATGCGGCGCTTAACGCGTCTTATCATGCCTACCGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTACCATGCCTACAAGTCt < 2:753321/149‑1 (MQ=255) cgaTGCCTGGTGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGAATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCtg < 2:1008784/147‑1 (MQ=255) gaggCCGGATGCGACGCTGAGCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGAGGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCtgt < 2:1239864/146‑1 (MQ=14) aaTGCCTGATGCGCCGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCtgt < 2:785527/149‑1 (MQ=255) tGCTTGATGTGAGGCTTAGCGCGTCTTATCATGGCTACAGGTTTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc < 2:280275/149‑1 (MQ=14) tGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACCGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc < 2:1083388/149‑1 (MQ=255) tGCCGGATGCGACGCTGAGCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc < 2:1076055/149‑1 (MQ=255) ggccgggtGCGACGCTTACCCGGTCTTTTCATGCCCACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc < 2:196153/142‑1 (MQ=14) ccTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCg > 2:440305/1‑149 (MQ=18) tGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGaa > 1:13722/1‑149 (MQ=255) gCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGt < 1:1095611/149‑1 (MQ=255) gACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTCGGCCGGATCAGGCGTACACGCCGCATCCGGCGGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATAATGCCTACAAGTCTGTGCCGTACCGTAg > 1:800210/1‑149 (MQ=14) gCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGcc < 2:1225892/149‑1 (MQ=255) ccTTAACGCGTCTTATCATGCCTACAGGTTTTTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGcc < 2:1014441/148‑1 (MQ=255) cTTAACGGGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCg < 2:696532/149‑1 (MQ=255) cTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCg < 2:177807/149‑1 (MQ=255) aCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATa > 1:1108767/1‑149 (MQ=255) aCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTAGCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATa > 2:398163/1‑149 (MQ=9) aCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGATGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCAGAACCGGAGGGCGGAtc > 2:714596/1‑148 (MQ=255) cgcgTTTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATaa < 2:1332072/149‑1 (MQ=255) gTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAGTTGGCGCACAATGCCTGAAGCGACGCTTGTCGCGTCTTATCGTGCCTCCAAGTCTGTGCCGAACCGTAGGCCGGATAAGGc > 2:635130/1‑149 (MQ=255) tCTTATCATGCCTACAGGTTTGTGACGAGCCGTAGGCCGGATAAGGCGTTCGCGCCGAATCCGGCAGTTGGCGGACGATGCATGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCg > 1:1011453/1‑149 (MQ=14) cTTATCATGCCTTCAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGt < 2:741855/149‑1 (MQ=255) ttATCACGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGtt < 2:736368/149‑1 (MQ=255) accATGCCTACAGGTTTGTGGCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCa < 1:133191/147‑1 (MQ=255) aTCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCa < 2:941136/149‑1 (MQ=255) cATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTTCCGACCCGTAGGCCGGATAAGGCGTTCAcg < 1:697467/149‑1 (MQ=255) cAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATCAGGCGTTCACGCCGCATcg > 1:129312/1‑148 (MQ=255) ggTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg < 1:707951/149‑1 (MQ=255) ttGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTcgc > 1:15708/1‑81 (MQ=38) tgtgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTGTCATGCCTACAAGTCTGTGCCGAACTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCAGt < 1:876553/149‑1 (MQ=255) tgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGGTAAGGCGTTCACGCCGCCTCCGGCAGTCg > 1:200688/1‑149 (MQ=255) tgCCGAACCGTAGGCCGGATAAGGCGTTCACGCAGCATCCGGCAGTTGACGCACAATGCCTGATGCGACGCTTGTCACGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCCGTCg > 1:865989/1‑149 (MQ=14) ccGCACCGTAGGCCGGATAAGGCGTTCACGCCGCCCCCGGCAGTGGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATGCGTCAggtcgc < 2:13722/149‑6 (MQ=11) gccGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCAt < 1:7521/148‑1 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGTCGGCGCaaaa > 2:1158215/1‑149 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGGATCCGGCAGTCGGCGCCTAATGCCt > 1:1048907/1‑149 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCCCGCCGCATCCGGCAGTCGGCGCATAATGGCTg > 2:601789/1‑149 (MQ=255) gATAAGGCGTTCCCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATACGGCGTTCACGCCGCAGCGGGATCCCGGCGCATAATGCCtcgtg > 2:946143/1‑145 (MQ=14) aaGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGgc < 1:988434/131‑1 (MQ=18) ggCGTTCCCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGCCGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGACCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACg < 1:901803/149‑1 (MQ=255) gCGTTCACGGCGCTTCCGGCAGTTGGCGCACAATGCCTGATGCGCCGCTTGTCGCGTCTTATCATGCCTACAGGTCTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGc < 2:399880/149‑1 (MQ=14) gCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGc > 1:1023226/1‑149 (MQ=255) gCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCCGGCGGCGCATAATGCCTGGAGCGACGc > 2:95706/1‑149 (MQ=14) gCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTCTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCCCCCCGCATCCGGCCGTCGCCGCATAATGCCTGACGcgccgc > 2:188016/1‑149 (MQ=14) ttCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGTCGACGCCTACTGCCTGATGCGCCGCtcg > 2:927977/1‑147 (MQ=14) ttCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACCCCGCATCCGGCAGTCGGGGCATGAGGCCTGATGCGACGCttt > 2:204047/1‑148 (MQ=255) caagcgtcgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGCCTTATCATGCCTACAAGTCTGTGCCGAAGCGTCTGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTACGCGCACAATGCCTGGTGCGACGCGTg > 2:1151693/8‑149 (MQ=11) acgacgCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTcg < 1:725061/149‑1 (MQ=255) ccgcATCCGGCAGTTGGCGCGCAATGCCCGATGCGACGCTTGCCGCGTCTTATCATGCCTACACGTCTGTGCCGAACCGTAGGCCGGATAAGGCGATCACGCCGCATCCGGCAGTCGGCTCATAATGCCTGATGCGACGCTTGTCGCGt < 2:744048/149‑1 (MQ=14) ccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGt < 1:581917/149‑1 (MQ=255) ccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGt < 1:1243479/149‑1 (MQ=255) ccgcATCCGGCAGTGGGCGCACAATGCCTGATGCGACGCTTGGCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGt < 1:286092/149‑1 (MQ=255) ccGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCa > 1:266289/1‑49 (MQ=40) ccGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAAGTCTGAGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATc < 2:982417/149‑1 (MQ=255) cggcggTTGGCACCCAAGGCCTGTTGCGACCCGTGACGCGTCTTAACCGGGCTATAGCGTTGTGTCGAACCGGGGGCCTTATTAGGCGTTCGCTCCTCATCCTGCAGTTGGCTCATAATGCCTGATGCGACGCGTGTCGCGTCTTATCa < 2:656452/149‑1 (MQ=255) cGGCAGTTGGCGCACAATGCCTGATGCGACGCTTCTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCa < 1:431406/149‑1 (MQ=255) ggCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACCAGTCTGTGCCCAACCGTAGGCCGGATACGGCGTTCACGACGCATCCGGCGGTCGACGCAGAATGCCTGATCCGGCGCATGTCGCGTCTTAtgag > 2:350929/1‑146 (MQ=14) ggCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACGGTAGGCGGGATAAGGCGTTAACGCCGCATCCGGAAGTCGGCGCATAATGCCTGATGCGACGCTTGTGGCGTCTTATCAt > 2:836843/1‑149 (MQ=14) ggCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGCCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCGGTCGGCGCTTACTGCCTGATGCGCCGCTCCTCGCGCCtcatcac > 2:729465/1‑148 (MQ=14) gCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATCCGGCGTTCACGCCGCATCCGGCCGGCGGCGCATAATGCCAGATGCGACGCTTGCCGCGACTGAGCATg > 2:47839/1‑149 (MQ=14) gCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATCAGGCGTTCCCGCCGCATCCGGCCGTCGGCGCACAATGCGTGATGCGACGCTTGTGGCGTCTGATCATg > 2:647964/1‑149 (MQ=14) cAGTTGGCGCACAATGCCTGATGCGACGCTTGGCGCGTCTTACCCTGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGc < 2:1299744/149‑1 (MQ=255) aGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGcc < 1:282442/149‑1 (MQ=255) aGTTGGAGCACCATGCCTGATGCGACGCTTGCCGCGTCTTATCATGCCTACAGGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGcc < 2:61661/149‑1 (MQ=255) gTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCt > 1:241102/1‑149 (MQ=255) ggCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCGTACCGACAAGACTGTGCCGAACCGTAGGCCGTATAAGGCGTTCCCGCCGCCTCCGGCCGTCGGCGCATAATGCCTGCTGCGACGCGTGGCGCGTCCTATCCTGCCcaca > 2:1161878/1‑149 (MQ=14) ggCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCCTGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACa > 2:1062436/1‑149 (MQ=255) gcgcACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGCCTTATCAGGCCTACaa > 2:239740/1‑148 (MQ=255) gcgcACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCCTGCCTACAg > 2:201532/1‑149 (MQ=255) gcgcACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAg < 2:137199/149‑1 (MQ=255) gcgcACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGGCTTATCATGCGTACAg > 1:346729/1‑149 (MQ=255) gcACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGt > 2:539374/1‑149 (MQ=255) gcACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCAGAATGCCTGATGCGACGCTTGTCGCGGCTTATCATGCCTACCggc > 2:1330761/1‑148 (MQ=255) acaATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTa > 2:373744/1‑61 (MQ=255) acaATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGCCGCTTGTCGCGCCTTATCATGCCTACAGCttt > 1:1105937/1‑149 (MQ=255) gCCTGACGCGCCGCTTGTCGCCTCTAAACATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGcc < 1:422015/149‑1 (MQ=17) tGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCGTATCATGCCTACAGGTTTGTGCCGac > 1:1200507/1‑148 (MQ=255) cGACGCTTGTCGCGTTTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTa < 1:165226/149‑1 (MQ=255) cGACCCTTGTGGCGTTTTATCATGCTTATAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTa < 1:650622/149‑1 (MQ=17) gACGCTTGGCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGCCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGGAg > 2:834574/1‑149 (MQ=255) gCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGcc > 2:1193029/1‑149 (MQ=255) cTTGTCGCGTCTTATCGTGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCg > 2:593688/1‑149 (MQ=255) ttGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCgg > 1:476699/1‑149 (MQ=255) ttGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCgg > 2:489250/1‑149 (MQ=255) tCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGAGGCGGGCCTTGTCGCGCCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATa > 2:1157250/1‑149 (MQ=14) | CACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATA > NC_000913/4614277‑4614572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |