| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3782596 | 564 (3.130) | 13 (0.080) | 12/276 | 20.1 | 2.3% | intergenic (‑35/+45) | cysE/gpsA | serine acetyltransferase/glycerol‑3‑phosphate dehydrogenase (NAD+) |
| ? | NC_000913 | = 3782603 | 550 (3.230) | intergenic (‑42/+38) | cysE/gpsA | serine acetyltransferase/glycerol‑3‑phosphate dehydrogenase (NAD+) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTTTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3782441‑3782596‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcccgCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTAC < NC_000913/3782603‑3782456 GGTTTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑C < 1:486480/149‑1GGTTTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑C < 2:2607265/149‑1 ggTTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CC < 1:664240/147‑1 TTTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCG > 1:859097/1‑149 gttcggtCTTGAGTAGCGTCGCGTCGTCAAACCTGGCCCGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTACTATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGG < 2:2313794/142‑1 TTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCGGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGG < 2:507898/149‑1 TTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGC < 1:259627/149‑1 TCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCC > 1:647247/1‑149 CGTGCTTGAGTAGCGTCGCGTGGAAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACCCGATGAGATAATGA‑CCGGCCC > 1:1985945/1‑149 CGTGCTTGAGGAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATGGCTTACTCCCCACGATGAGATAATGA‑CCGGCCC > 2:2621190/1‑149 CGTGCTTGAGCAGCGTCGCGTGGTAATAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGGTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCC < 1:796920/149‑1 ggGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTAAGTTCCATTTCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCG < 1:1740019/147‑1 GTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCG > 1:358792/1‑149 GTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTGCTTCACACGACATTGCTTCCTCCACACGACGCGAAAAGTA‑CCGGCCCG > 2:548282/1‑149 CTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATCTTGTTCCAGACCATTTCCAGCTCTTCAAACGACATTGATTACTCCACAAGACGAGGTAATGC‑CCGGCACGCtc > 1:1379228/1‑147 TTGAGTAGCGTCGCGTGGTAAAGACTGGCCAGCATAGACACAGAGTCCGCCAGCGTTCTGGCTTCGGCTTTCATATTGTTCCAGACAATTTACAGTGCTTCACACGACATTGCTTACTCCACACGATGAGATAATGG‑CCGCCCCGgtct > 2:521188/1‑145 TCGCGTGGTAAAAACGGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCGCGCAGAACGGGCCG < 1:284194/149‑1 GCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGACCCGGCCCGCGCAGAACGGGCCGG < 1:1595177/149‑1 GCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCGCGCAGAACGGGCCGGT < 1:1480053/149‑1 CGTGGTAAAAACTGGCCAGCATTGGCTAACAGTCCGCCCGCGTTCCGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCGCGCAGAACGGGCCGGTC < 1:569125/149‑1 GTGGCAAAAACGGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGACCCGGCCCGCGCAGAACGGGCCGGTC < 1:1572945/149‑1 AAAACTGTTCAGCATTGACTCACAGTCCTCCATCGTTTTGGCTTCGCCTTTAATATTGTTCCAGACAATGTCCAGGTCTTCACACGACATTGTTTACTCCACACGATGAGATAATGACCCGGCCCGCGCAGAACGGGCCGGTCATTATC < 1:1306506/149‑1 TGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAA < 1:1628531/149‑1 TCCGCCATCGTTCGGGCTTCGGCTTTAATATTGTTCCAGACAATTCCCAGTTCTGCACACGAAATTGCTTACTCCACACGTGGAGAAAATGA‑CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGT < 1:539530/149‑1 TTTCATATTGTTCCAGCCAATTGCCGGTTCTCCACACGCCATTGCTTACTCCACACGATGAGATAATGACCCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTG < 2:1901900/149‑1 TCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCGCGCAGAACGGGCCGGTCATTAT > 2:1913658/1‑77 TCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCGCGCAGAACGGGCCGGTCATTAT < 1:1913658/77‑1 tgccCCGGCCGGTGCAGAACGGGCCGGTCATTATCTCTCCGTGTGGAGTGAGCAATGTCGTGTGAGGAACTGGAAATTGTCTGGAACATTATTAAAGCCGTAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCA < 2:394399/145‑1 ggcccctGCCCGCGCAGGACGGGGCGGGCGTTAGCTCGTCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCA < 1:2802316/142‑1 GA‑CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAAAGCTGGCCAGTTTTTACCACG > 2:2537581/1‑149 CCGGCCCGGGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCG < 2:62780/149‑1 CCGGCCCGCGCAGAACGGGCCGGTTATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTGCCACGCG > 1:2263447/1‑149 CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCG > 2:1434550/1‑149 CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGGTTTTACCACGCG > 1:1061957/1‑149 CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCA > 2:2909124/1‑102 CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCA < 1:2909124/102‑1 CCGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCCGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCG > 1:3022091/1‑149 CGGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGA > 1:492850/1‑149 GGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGATCTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGAC < 1:2049364/149‑1 GGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGAC < 1:442035/149‑1 GGCCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCCGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGAC < 2:3022091/149‑1 ccaGCGCAGACCGTGGCTGTCTTTACCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAAAACTGGGAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGC < 2:2948821/146‑1 CCCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGC < 1:1184145/149‑1 CCGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTCGCGGACTGTGAGCGAACGCAGGCCAGTTTTTACCACGCGACGac > 2:1852257/1‑147 CGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTA < 1:2819626/149‑1 CGCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTA > 1:2735479/1‑149 GCGCATAACGGGCCGGTCATTATCGCATCGTGTGGAGTAAGCAATGTTGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAGGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTAC < 2:2976161/149‑1 GCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGCAGAACTGGAAATTATCTGGCACAATATTACAGCCGCAGCCAGAACGCTGGCGGACTGTGAGCCTATCATGGCCAGTTTTTACCACGCGACcatac > 2:2347990/1‑144 GCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTAC > 1:2440160/1‑149 GGTTTTCGTGCTTGAGTAGCGTCGCGTGGTAAAAACTGGCCAGCATTGGCTCACAGTCCGCCAGCGTTCTGGCTTCGGCTTTAATATTGTTCCAGACAATTTCCAGTTCTTCACACGACATTGCTTACTCCACACGATGAGATAATGA‑CCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3782441‑3782596‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcccgCGCAGAACGGGCCGGTCATTATCTCATCGTGTGGAGTAAGCAATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTAC < NC_000913/3782603‑3782456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |