New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4542683 =136 (0.750)20 (0.120) 18/274 16.6 12.7% intergenic (+49/‑433) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
?NC_000913 4542997 = 147 (0.870)intergenic (+363/‑119) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 141 total aligned reads displayed.

CCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAG  >  NC_000913/4542535‑4542831
                                                                                                                                                    |                                                                                                                                                     
 cATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAAtt                                                                                                                                                      <  1:2685801/149‑1 (MQ=255)
    aCTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTggg                                                                                                                                                   <  2:699494/149‑1 (MQ=255)
     cTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGATGTTTGTAGTTTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTgggg                                                                                                                                                  >  1:2964632/1‑149 (MQ=255)
       gtgCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATGCAAGACAATTGGGTcc                                                                                                                                                >  2:2034780/1‑149 (MQ=255)
          cgatataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                             <  1:241273/146‑1 (MQ=255)
           gTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTGTGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGCTGGATTTAACTTATTGATAATAAAGTTAAACAAACAAACAAATAAAAAACAACATAGGCCAAAc                                                                                                                                            >  1:1385107/1‑149 (MQ=255)
           gTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAACCAAATAAATACAAGCCAAGTGGGGCCattt                                                                                                                                            >  1:2355726/1‑146 (MQ=255)
           gTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCattt                                                                                                                                            >  1:1531893/1‑146 (MQ=255)
             tataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGTGCCAAACTg                                                                                                                                          >  2:2310186/1‑149 (MQ=255)
             tataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGAGAATAAAGTTAAAAAAACAAATAAAAACAAGACAATTGGGGCCAAACTg                                                                                                                                          >  1:136794/1‑149 (MQ=255)
              ataCCGCCAGTAATGCTGCTCGTTTTGCCGGCTTATGGGAAAGAAATAATCTCATAAACGAAAAATGAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACACGACAATTGGGGCCactttga                                                                                                                                         >  1:1724443/1‑143 (MQ=255)
              ataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGTCAACCTGt                                                                                                                                         >  1:1662736/1‑149 (MQ=255)
              ataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGt                                                                                                                                         >  1:2859366/1‑149 (MQ=255)
               taCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTc                                                                                                                                        >  1:964515/1‑149 (MQ=255)
                 ccGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCa                                                                                                                                      <  1:884758/149‑1 (MQ=255)
                 ccGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGAGTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGTGCCaaaatcaccc                                                                                                                                      >  2:2254082/1‑142 (MQ=255)
                 acgcacgTAAGGCCGGTCGGTTTGCGTGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAAGAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCa                                                                                                                                      <  2:1378092/143‑1 (MQ=255)
                  cGCCAGTAATGCTGCTCGTTTTTTTTTTTTTTTGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGTCCAAACTGTccct                                                                                                                                     >  2:1562139/1‑147 (MQ=255)
                  cGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCAat                                                                                                                                     >  2:2041761/1‑149 (MQ=255)
                     cAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATc                                                                                                                                  <  1:2916849/149‑1 (MQ=255)
                      aGTAATTCTGCTCTTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCa                                                                                                                                 <  2:432507/149‑1 (MQ=255)
                          aTGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaa                                                                                                                             <  1:587800/149‑1 (MQ=255)
                            gctgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAACAACAAATAAATACAAGACAATTGGGGCCAAACTATCCATATCataaata                                                                                                                           >  2:830750/1‑149 (MQ=255)
                            gctgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaata                                                                                                                           <  1:1018592/149‑1 (MQ=255)
                             ctgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaataa                                                                                                                          <  2:714599/149‑1 (MQ=255)
                              tgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAg                                                                                                                         <  1:2180986/149‑1 (MQ=255)
                              tgctCGTTTTGCCGGATAATGGGAAAGAAATAATCTCATAATACAAGAAGTAAAAAGAGCAAAGTTGAGAGTTAACTTATTTATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAg                                                                                                                         >  2:2141232/1‑149 (MQ=255)
                              gtctCGTTTTGCCGGATTATGTGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAg                                                                                                                         <  2:2729479/147‑1 (MQ=255)
                               gctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTggg                                                                                                                                                   >  1:514650/1‑122 (MQ=255)
                                  cGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAACCACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTAc                                                                                                                     >  1:1600399/1‑149 (MQ=255)
                                    gtttGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGt                                                                                                                   <  2:992395/148‑1 (MQ=255)
                                        gCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGCGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTAttt                                                                                                               >  2:2278854/1‑149 (MQ=255)
                                         ccGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTAtttt                                                                                                              >  2:2377595/1‑149 (MQ=255)
                                           ggATTATGGGAAAGAAATAATCTCATAACCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTCATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAGATGTCCACATCATCAATAAGTCACATAtttttt                                                                                                            >  2:1704295/1‑149 (MQ=255)
                                              gtATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTtctc                                                                                                         <  1:1433461/148‑1 (MQ=255)
                                                aTGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCaa                                                                                                       <  2:1092446/149‑1 (MQ=255)
                                                aTGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCaa                                                                                                       <  2:2859366/149‑1 (MQ=255)
                                                   gcaaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTAAGCATAGCATAAATAAGTTACGTATTTTTTCTCAAGCa                                                                                                    <  2:2152599/147‑1 (MQ=255)
                                                    gaaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGACAAACTATCCATATCATAAATAAGATACGTATTTTTTCTCAAGCAt                                                                                                   >  2:1242942/1‑149 (MQ=255)
                                                     aaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAACTAAGTTACGTATTTTTTCTCAAGCATa                                                                                                  >  2:1426810/1‑149 (MQ=255)
                                                     aaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGCTTGAATTAACTTATTGATAGTAGAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATa                                                                                                  >  1:2979644/1‑149 (MQ=255)
                                                      aagaaaTAATCACATTAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATCATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGCCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaa                                                                                                 <  1:1027444/149‑1 (MQ=255)
                                                       agaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaaa                                                                                                <  1:2617562/149‑1 (MQ=255)
                                                         aaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATaaaaa                                                                                              <  2:2795075/149‑1 (MQ=255)
                                                          aataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                <  1:1220539/114‑1 (MQ=255)
                                                          aataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                >  2:1220539/1‑114 (MQ=255)
                                                           ataatCTCATAAACGAAAATTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAata                                                                                            <  1:537371/149‑1 (MQ=255)
                                                              atCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTa                                                                                         <  1:2546541/149‑1 (MQ=255)
                                                               tctcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTAAAACATAAAAATAGTaa                                                                                        >  1:2041089/1‑149 (MQ=255)
                                                                ctcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaa                                                                                       <  2:2982107/149‑1 (MQ=255)
                                                                 tcATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaaa                                                                                      >  1:1828726/1‑149 (MQ=255)
                                                                  gatgaaCGAAAAATTAAGAAGAGAAGCGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaaaa                                                                                     <  1:2478110/145‑1 (MQ=255)
                                                                     aaaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACg                                                                                  >  2:1467909/1‑149 (MQ=255)
                                                                      aaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa                                                                                 <  1:2310186/149‑1 (MQ=255)
                                                                      aaCGAAAAATAAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGTGGTCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa                                                                                 <  2:686472/149‑1 (MQ=255)
                                                                       aCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACgcc                                                                                >  1:1302849/1‑147 (MQ=255)
                                                                         gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑Caa                                                                             >  2:1099675/1‑149 (MQ=255)
                                                                         gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑Caa                                                                             >  1:1557579/1‑149 (MQ=255)
                                                                         gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAACATACAAATATTAAAAAACGA‑Caa                                                                             >  1:2738253/1‑149 (MQ=255)
                                                                          aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATGGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCCTAAATAAGTTCCGTATAACTTTGAAAGTATAGAAATATTAAAAAACGA‑Caaa                                                                            >  1:2658514/1‑149 (MQ=255)
                                                                           aaaaTTAAAAAGAGAAGAGGCTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑Caaaa                                                                           >  1:1989702/1‑149 (MQ=255)
                                                                             aaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAg                                                                         >  2:2297548/1‑149 (MQ=255)
                                                                                      gagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACt                                                                >  1:1656163/1‑149 (MQ=255)
                                                                                         aagagGTTTGACTTAACTGATTGAAAAAAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATAACATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAAA‑AAAAAAGCATCTAACTGtt                                                             <  2:1521708/149‑1 (MQ=255)
                                                                                           gagGTTTGATTTAACTTATTAATAATAAAGTTAAAAAAACAAATAAATACAAGAAAATTGGGGCTAAACTGTCCATATCATAAATAAGTTACGTGTTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑AAAAAAGCATCTAACTGTTTg                                                           >  2:248561/1‑149 (MQ=255)
                                                                                            agGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGa                                                          <  1:500004/149‑1 (MQ=255)
                                                                                             ggTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGat                                                         <  2:2665044/149‑1 (MQ=255)
                                                                                             cgTTTGATTTAACTTATTCATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTCACTGTTTGat                                                         <  1:1062069/148‑1 (MQ=255)
                                                                                              gTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGata                                                        >  2:1338853/1‑149 (MQ=255)
                                                                                               tttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGatat                                                       <  1:1359029/149‑1 (MQ=255)
                                                                                                 tGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGt                                                     <  2:475615/149‑1 (MQ=255)
                                                                                                    tttAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTACATATCATAAATAAATTACGTATTTTTTCTTAAGCATAAAAATATTAAAAAACGA‑CAAAAAGATTCTAACTGTTTAatatattat                                                  >  2:757790/1‑144 (MQ=255)
                                                                                                        aCTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAACATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAattat                                              >  2:1014584/1‑149 (MQ=255)
                                                                                                         cTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTaaa                                                  <  1:2705176/144‑1 (MQ=255)
                                                                                                         cTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTaaa                                                  >  2:2705176/1‑144 (MQ=255)
                                                                                                          ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATTTAAATTAttt                                            >  2:1863222/1‑149 (MQ=255)
                                                                                                           tATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAAAAATTTc                                           >  2:2116493/1‑149 (MQ=255)
                                                                                                              tGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTAt                                        <  1:1467909/149‑1 (MQ=255)
                                                                                                              tGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTAt                                        <  1:179351/149‑1 (MQ=255)
                                                                                                                  aataaAGTTAAAAAAACAAATAAATACAAAACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACAA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTa                                    <  2:240409/149‑1 (MQ=255)
                                                                                                                   ataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATTTGTAAATTATTTCTATTGTaa                                   <  1:2147796/149‑1 (MQ=255)
                                                                                                                           aaaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAAttt                           >  1:2157975/1‑149 (MQ=255)
                                                                                                                           aaaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAAttt                           <  1:2917774/149‑1 (MQ=255)
                                                                                                                            aaaaaaCAAATAAATACAAGACAATTTGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATAAAAAAACGA‑CAGAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTTAATTAAtttg                          >  2:61185/1‑148 (MQ=255)
                                                                                                                             aaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCTTAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTca                         <  2:875794/149‑1 (MQ=255)
                                                                                                                             aaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGCTAAAGTGCTTTATTCTATTAATGAAAAAAAACGACCAAGAAGC‑TCTAACGATGTCATATGTAAATTATTTCTATCTTAAATTAATATca                         >  1:2219869/1‑149 (MQ=255)
                                                                                                                              aaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcac                        <  1:2185809/149‑1 (MQ=255)
                                                                                                                               aaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTTTTTGATATTTAAATTATGCCTATTGTAAATTAATTTcaca                       >  1:2887614/1‑149 (MQ=255)
                                                                                                                               aaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcaca                       <  1:2881005/149‑1 (MQ=255)
                                                                                                                                aaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACAt                      <  2:1557579/149‑1 (MQ=255)
                                                                                                                                 aCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATc                     <  1:2453231/149‑1 (MQ=255)
                                                                                                                                     ataaatcAAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCt                 <  2:391417/149‑1 (MQ=255)
                                                                                                                                     ataaataCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCt                 >  1:2730661/1‑149 (MQ=255)
                                                                                                                                             aaGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCtata         >  2:2222159/1‑149 (MQ=255)
                                                                                                                                               gACAATTGGGGCCAAACTGTCCATATCATAAATAAGGTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGATTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCCCCGCTACATg       >  2:1694411/1‑149 (MQ=255)
                                                                                                                                                  aaTTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTACTTTCACATCACCTCCGCtatagttac    >  1:716222/1‑144 (MQ=255)
                                                                                                                                                   aTTGGTGCCAAACCGTCCATATCATAAATCAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCGATATGTaaa   <  2:136794/149‑1 (MQ=255)
                                                                                                                                                    ttGGGTACAAACTGTCCATACCATAAATAAGTTACGTATTTTCTCCCAACCCTAAAAATATTAAAAAACGA‑CGATAAGCATCTCACTGTTTGGTATGTACATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg  <  2:1983897/149‑1 (MQ=255)
                                                                                                                                                    ttGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg  <  2:992495/149‑1 (MQ=255)
                                                                                                                                                    ttGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAACCATAAAAATATTAAAAAACGA‑CAAAGAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg  <  2:1983529/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGA‑CAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAG  >  NC_000913/4542535‑4542831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.