BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583427 =	NA (NA)	351 (1.950)	174/292	0.0	61.7%	intergenic (+10/‑55)	yrhA/insA	pseudogene, interrupted by IS1E/IS1 repressor TnpA
*	?	NC_000913	3722341 =	218 (1.210)	351 (1.950)	174/292	0.0	61.7%	coding (2056/2070 nt)	glyS	glycine tRNA synthetase, beta subunit

Only 100 of 147 total aligned reads displayed.

AGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT  >  NC_000913/3583280‑3583571

 gCCTCTCGATTCCAGAACCTTCAGTTAAAAACTTTTTTGCCGTAAATGAATTTCATAGAAATAATAATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGt                                                                                                                                                <  1:1905876/149‑1 (MQ=255)

  ccTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATTAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGCGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTg                                                                                                                                               >  2:2190411/1‑149 (MQ=255)

  ccTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATCTCTATATTTACTTATGACATTAAAGGTg                                                                                                                                               <  1:1701483/149‑1 (MQ=255)

   ctctCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGACTTACGTAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGa                                                                                                                                              >  1:2086399/1‑149 (MQ=255)

   ctctCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTACAGGTGa                                                                                                                                              >  1:142881/1‑149 (MQ=255)

    tctcGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTAAt                                                                                                                                             >  2:146784/1‑149 (MQ=255)

        gATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATACTGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTGTTGACATTAAAGGTGAcgctg                                                                                                                                         >  2:37808/1‑149 (MQ=255)

        gATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgctg                                                                                                                                         >  1:438465/1‑149 (MQ=255)

        gATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAAATTTATAGAAGTAATGGTAATTTCATAAACCCTGATCTACAAGAACGGTTCGTGATCGGGGATTATCGCGTTTCAGTATTCTCCGAGGACATTCAAGTTGAtgctc                                                                                                                                         >  2:2794926/1‑148 (MQ=255)

         aTTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGTTGAggcgtc                                                                                                                                        >  2:472260/1‑146 (MQ=255)

         aTTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgctgc                                                                                                                                        <  1:1234567/149‑1 (MQ=255)

          ttacataaCCGTCAGTTAAAGAGCGTTCTGCCGTAAATGAATTTTATAGAAATAAGGATGATTTCATAAACCCTGACCTACAAGAACGGTTAGTGATCGGGGATGATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGcc                                                                                                                                       <  2:2537597/143‑1 (MQ=255)

           tCCAGAACCTTCAGTTAAAAACCTTTTTTTTTTTTTTTTATTTTATAGAAATAATGCTGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGCTTATAGCATTTCAATATTTACTTATGAAATTCAAGTTGATTCTTCCa                                                                                                                                      >  2:1255550/1‑149 (MQ=255)

            ccAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCaa                                                                                                                                     <  2:1704331/149‑1 (MQ=255)

             cAGAATCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAAc                                                                                                                                    <  2:2387969/149‑1 (MQ=255)

              aGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACt                                                                                                                                   <  2:2271740/149‑1 (MQ=255)

                aaCCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTa                                                                                                                                 <  1:1106055/149‑1 (MQ=255)

                  ccTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACt                                                                                                                               <  1:2821846/149‑1 (MQ=255)

                    ttCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGa                                                                                                                             >  2:653861/1‑149 (MQ=255)

                      cAGTGAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCAAAAACCCTGAACAATAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGAtt                                                                                                                           <  2:1837024/149‑1 (MQ=255)

                        gTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTa                                                                                                                         <  1:272667/149‑1 (MQ=255)

                         ttAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACAGTTAGTGATCGAGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAg                                                                                                                        >  2:333501/1‑149 (MQ=255)

                          tAAAAACCTTTTTGCCTTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                       <  2:1637333/149‑1 (MQ=255)

                          tAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGGCATTAAAGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                       <  2:2996302/149‑1 (MQ=255)

                          tAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgt                                                                                                                       <  1:698235/149‑1 (MQ=255)

                           aaaaaCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAgtg                                                                                                                      <  1:69395/149‑1 (MQ=255)

                            aaaaCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGAAATAATAAACCCGGATCTACAAGAACGGTTAGTGATCGGGTATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCACCTTACTGATTTAgtat                                                                                                                     >  2:1263532/1‑147 (MQ=255)

                              aaCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATGAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTat                                                                                                                   >  1:2766536/1‑149 (MQ=255)

                                    tttGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGgt                                                                                                             <  2:1792259/149‑1 (MQ=255)

                                    tttGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGgt                                                                                                             <  2:1625310/149‑1 (MQ=255)

                                        cagTAAATGAATTTTAAAGAAATAATGATGAATTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttt                                                                                                         <  2:2746058/147‑1 (MQ=255)

                                         cGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGtttt                                                                                                        >  2:2863876/1‑149 (MQ=255)

                                          gTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGttttt                                                                                                       <  1:653861/149‑1 (MQ=255)

                                           tAAATGAATTTGATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTg                                                                                                      <  2:1503427/149‑1 (MQ=255)

                                            aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                     <  2:1801718/149‑1 (MQ=255)

                                            aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                     <  1:2307972/149‑1 (MQ=255)

                                            aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                     <  1:1221909/149‑1 (MQ=255)

                                            aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                     <  2:314217/149‑1 (MQ=255)

                                            aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                     <  2:534152/149‑1 (MQ=255)

                                            aaaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAAAGGTCAAATATCTCGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGa                                                                                                     <  1:2205713/149‑1 (MQ=38)

                                             aaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAg                                                                                                    <  1:2571736/149‑1 (MQ=255)

                                             aaTGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAg                                                                                                    <  2:2743719/149‑1 (MQ=255)

                                             aaTGAATTTTATAGAAATAAGGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAg                                                                                                    <  1:3019870/149‑1 (MQ=255)

                                             aaTGAATTTTATAGAAATAACGATGATTTCATAAACCCGTATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAg                                                                                                    <  1:151386/149‑1 (MQ=255)

                                                   ttttATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTc                                                                                              <  2:1907567/149‑1 (MQ=255)

                                                         aGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTCCTCCAGTga                                                                                        >  2:944163/1‑148 (MQ=255)

                                                          gAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGc                                                                                       <  1:1662487/149‑1 (MQ=255)

                                                           aaaTAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGGTGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCGCCAGTGGCt                                                                                      >  1:391733/1‑149 (MQ=255)

                                                           aaaTAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCt                                                                                      >  1:418754/1‑149 (MQ=255)

                                                           aaaTAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCt                                                                                      >  2:1212626/1‑149 (MQ=255)

                                                              taatGCTGATTTCATAAACCCTGATCTCTCAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCt                                                                                   <  1:837417/149‑1 (MQ=255)

                                                              taagGATGATTCCCTAAACCCTGATCTACAAGAACGGTTAGGGAGCGGGGATTATAGCAGTTCAATATTTACTTATGACATCAAAGGTGAGGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCt                                                                                   <  1:809537/149‑1 (MQ=25)

                                                                  gatgatTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGttt                                                                               <  2:2814679/149‑1 (MQ=255)

                                                                   atgatTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTc                                                                              <  1:2781182/149‑1 (MQ=255)

                                                                    tgatTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCt                                                                             <  2:1699977/149‑1 (MQ=255)

                                                                     gatGTCATAGATCCTTTTCTACTAGAACGGTTAGTGATCGATGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTa                                                                            <  2:2560973/149‑1 (MQ=21)

                                                                     gatGTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTa                                                                            <  2:541249/149‑1 (MQ=255)

                                                                        ttCATAAACCCTGATCTACCAGAACGGTTAGTGATCGGGGATTATAGCATTTCAAGATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCa                                                                         <  1:292712/149‑1 (MQ=255)

                                                                        ttCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGCTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCa                                                                         <  1:1924133/149‑1 (MQ=255)

                                                                           aTAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCt                                                                      >  1:2652418/1‑149 (MQ=255)

                                                                           aTAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCt                                                                      >  1:1723124/1‑149 (MQ=255)

                                                                             aaaCCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGt                                                                    >  2:1204837/1‑149 (MQ=255)

                                                                             aaaCCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGt                                                                    <  1:2092478/149‑1 (MQ=255)

                                                                                  cTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctc                                                               <  2:2050553/149‑1 (MQ=255)

                                                                                   tGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCcctcc                                                              >  1:2881434/1‑149 (MQ=255)

                                                                                     aTCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTg                                                            <  1:472260/149‑1 (MQ=255)

                                                                                        tataaGAACGGTTAGTGACCGGGGATTATAGCATTTCAATATTTAATTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATTGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTc                                                         <  2:1028825/146‑1 (MQ=255)

                                                                                        tACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTc                                                         >  1:1111232/1‑149 (MQ=255)

                                                                                        tACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTc                                                         >  2:843551/1‑149 (MQ=255)

                                                                                          cAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAg                                                       >  2:448679/1‑149 (MQ=255)

                                                                                           aaGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGCTAGAATGGTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGc                                                      >  1:707943/1‑149 (MQ=21)

                                                                                           aaGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGc                                                      >  1:1139411/1‑149 (MQ=255)

                                                                                              aaCGGTTAGTGATCGGGGATTATAGCATTTCAATATCTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGAGTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAc                                                   <  1:37808/149‑1 (MQ=255)

                                                                                                  gTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGGCATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAc                                               >  1:220933/1‑149 (MQ=255)

                                                                                                  gTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCt                                                                             <  2:2259699/119‑1 (MQ=255)

                                                                                                      gTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACgggg                                           >  1:2532366/1‑149 (MQ=255)

                                                                                                        gATCGGGGGTTATAGCAGTTCAATATTGACTTAGGACTTTAAAGGGGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGggtg                                         >  2:278138/1‑149 (MQ=17)

                                                                                                          tCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGggtggt                                       <  1:1424963/149‑1 (MQ=255)

                                                                                                              ggATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGt                                   >  1:1313801/1‑149 (MQ=255)

                                                                                                                  tataGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACg                               <  2:418754/149‑1 (MQ=255)

                                                                                                                  tataGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACg                               <  1:1801525/149‑1 (MQ=255)

                                                                                                                   ataGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGAAGGTGTTTTTTTTTTTTTTTAGTGGCTTCTGTTTCTATCAGTTGTCTCTTCTGTTCATCTACTGACGGTGTGGTGCGTTACgg                              >  2:1399929/1‑149 (MQ=17)

                                                                                                                   ataGCACGTCAATTTTTACTTATGACATTAAAGGTGATGCGGCCAACTTACTGATTTAGTGTATGATGGTGTTTTGGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACgg                              <  2:1332550/149‑1 (MQ=14)

                                                                                                                     aGCATTTCAATCTTCACTTATGACATTAAAGGTGATGCTGCCAACGTACAGCCACAGTGCAGCGAAGAGTAGTTGTGGTGGTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGAGTAACGGCa                            >  2:648394/1‑149 (MQ=9)

                                                                                                                       cATTTCAATATTTACTTCTGACATTAAAGGTGATGATGCCAACTTACTGTTTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCCGTTCAGCTACTGTCGGGGTGGTGCGTAACGGCaaa                          <  1:2002760/149‑1 (MQ=17)

                                                                                                                        aTTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCaaaa                         <  1:2512346/149‑1 (MQ=255)

                                                                                                                          ttCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTCACGGCAAAAGc                       >  1:1555895/1‑149 (MQ=255)

                                                                                                                                atTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGAGTAACGGCAAAAGCAcagtc                 >  2:166728/1‑145 (MQ=255)

                                                                                                                                   tatttATGACATTAAAGGGGATGCTGCCAACTTACGGATTTAGTGTATGATGGTGTTTTTGAGGGGCTCCAGTGGCTTCTGTTTCTATCAGCTGCCCCTCCTGGTCAGCTACGGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGa              <  1:2794926/146‑1 (MQ=14)

                                                                                                                                      ttATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACAt           >  1:2627654/1‑149 (MQ=39)

                                                                                                                                        aTGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCa         <  2:2342417/149‑1 (MQ=38)

                                                                                                                                        aTGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCa         <  1:2271707/149‑1 (MQ=38)

                                                                                                                                          gACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTACCGGCACAAGCACCGCCGGACATCAgc       >  1:865331/1‑149 (MQ=25)

                                                                                                                                          gACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAgc       >  1:2883321/1‑149 (MQ=35)

                                                                                                                                           aCATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAgcg      <  1:1205390/149‑1 (MQ=35)

                                                                                                                                           aCATCAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGGCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAgcg      <  1:478493/149‑1 (MQ=17)

                                                                                                                                            cATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAACGCCGGACATCAgcgc     >  1:2642737/1‑149 (MQ=21)

                                                                                                                                             aTTAACGGTGAAACTGCAACATTACTGATTTAGAGTAGGGTGATGTGTTTGTGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGTTGCGTAACGGCAAAAGCACCGCCGGACACCAgcgcc    >  2:1036175/1‑148 (MQ=11)

                                                                                                                                              ttAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTa   >  1:652854/1‑149 (MQ=32)

                                                                                                                                               tAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAt  <  1:926943/149‑1 (MQ=32)

AGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT  >  NC_000913/3583280‑3583571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.