New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4542691139 (0.770)20 (0.120) 18/274 16.6 12.6% intergenic (+57/‑425) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
?NC_000913 = 4542987 146 (0.860)intergenic (+353/‑129) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 159 total aligned reads displayed.

TTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGG  >  NC_000913/4542839‑4543134
                                                                                                                                                      |                                                                                                                                                   
ttCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                                                                                                     <  1:2295035/149‑1 (MQ=255)
    gtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGc                                                                                                                                                 <  1:2924670/149‑1 (MQ=255)
    gtgGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGc                                                                                                                                                 <  1:1338853/149‑1 (MQ=255)
    gtgGCTCGACGCATCTTCCTCATTCTTCTCTCC‑AAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGcc                                                                                                                                                >  2:2990160/1‑149 (MQ=255)
       gCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAAATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAAAGGcccc                                                                                                                                              >  2:444543/1‑149 (MQ=255)
        cTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGAAGCTTTCCTCTATGAGTCAAAATGGCCCCa                                                                                                                                             >  2:1928606/1‑149 (MQ=255)
         tCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCaa                                                                                                                                            >  2:2831394/1‑149 (MQ=255)
           gACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAAt                                                                                                                                          <  1:426107/149‑1 (MQ=255)
               cATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGttt                                                                                                                                      <  2:1282785/149‑1 (MQ=255)
                aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATACACATCCATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTc                                                                                                                                     <  1:243450/149‑1 (MQ=255)
                aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAAGGTTTc                                                                                                                                     >  1:513961/1‑149 (MQ=255)
                   ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAACTAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGACCCCAAATTTTTCATc                                                                                                                                  >  2:1773677/1‑149 (MQ=255)
                       tCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATCACAATAGCATACTAAGCCAAAAACAGC‑ACTGACCAAGTC‑TGAAGGCGATGCTTTGCTCTATAAGTAAAAATGGCCCCAAATGTTTCATCtttt                                                                                                                              >  2:2518744/1‑149 (MQ=255)
                         aTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                            >  1:977571/1‑149 (MQ=255)
                         aTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                            <  2:2197721/149‑1 (MQ=255)
                         aTTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgg                                                                                                                            <  1:2297548/149‑1 (MQ=255)
                          ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTggg                                                                                                                           <  2:1499055/149‑1 (MQ=255)
                           tcttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTgggg                                                                                                                          <  1:830750/149‑1 (MQ=255)
                             ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCCAAATGGCCCCAAATGTTTCATCGTTTcggtgg                                                                                                                        >  2:1720714/1‑146 (MQ=255)
                             ttctCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGa                                                                                                                        >  1:844189/1‑149 (MQ=255)
                               ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGaaa                                                                                                                      >  1:1396620/1‑149 (MQ=255)
                                  tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAATAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACt                                                                                                                   <  2:1742278/149‑1 (MQ=255)
                                  tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACt                                                                                                                   <  1:447655/149‑1 (MQ=255)
                                  tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACt                                                                                                                   >  2:2629856/1‑149 (MQ=255)
                                    cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAAGATTAATCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgt                                                                                                                 >  1:2845105/1‑149 (MQ=255)
                                     aaaaaCCACCTCATGCAATATAAACATCTAGAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgtg                                                                                                                <  2:156456/149‑1 (MQ=255)
                                            accTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCACAAAGGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                         <  1:2990160/149‑1 (MQ=255)
                                            accTCATGCAATATAAACATCTATAAATAAAGATAACAACAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt                                                                                                         <  2:2979644/149‑1 (MQ=255)
                                             ccTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTg                                                                                                        >  2:1126840/1‑149 (MQ=255)
                                                 aTGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAg                                                                                                    <  1:1168825/149‑1 (MQ=255)
                                                  tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGt                                                                                                   >  1:2136929/1‑149 (MQ=255)
                                                  tGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGt                                                                                                   >  1:2254868/1‑149 (MQ=255)
                                                     aaTATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAGGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCaa                                                                                                >  1:1795832/1‑149 (MQ=255)
                                                     aaTATAAACATCTATAAATAAAGATAACAATAGAATATTAAG‑CATCGTGTAATTGTGCACAGGGC‑GGGCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCaa                                                                                                >  1:2977464/1‑149 (MQ=255)
                                                       tataAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTTAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAAc                                                                                              <  2:1977616/149‑1 (MQ=255)
                                                             cATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGttt                                                                                        <  2:1853978/149‑1 (MQ=255)
                                                              aTCTATAAATAAAGATAACAATAGCATATTAAGCAAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTGTa                                                                                       >  1:1541283/1‑149 (MQ=255)
                                                                 tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaa                                                                                    <  1:2116493/149‑1 (MQ=255)
                                                                 tataAATAAAGATAAAAATAAAATATTAAGCCAACAAAGAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaa                                                                                    <  1:61185/149‑1 (MQ=255)
                                                                  ataaataaAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAACCTCGTTTacaaa                                                                                   >  2:1459473/1‑149 (MQ=255)
                                                                  ataaataaAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGGGTTGGCAGTCAAACTCGTTTacaaa                                                                                   >  1:2010434/1‑149 (MQ=255)
                                                                   taaataaaGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa                                                                                  <  2:1931343/149‑1 (MQ=255)
                                                                   gaaataaaGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaa                                                                                  >  2:1556638/2‑149 (MQ=255)
                                                                    aataaaaGATAACAATAGAATATTAAGCCAACAAATAA‑ACTTAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac                                                                                 <  2:2132993/145‑1 (MQ=255)
                                                                     aataaaGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaaca                                                                                >  1:2745044/1‑149 (MQ=255)
                                                                      ataaaGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTGGTTTacaaaacaa                                                                               >  1:1647256/1‑149 (MQ=255)
                                                                      ataaaGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaa                                                                               >  1:2729243/1‑149 (MQ=255)
                                                                       taaaGATAACAATAGAATATTAAGCCAACAAATTA‑AAT‑AAAAAGTTCTGTCCTCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCACACTCGCTTacaaaccaaa                                                                              <  2:2887614/149‑1 (MQ=255)
                                                                       taaaGATAACAATAGAATATTAAGACAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaacaaa                                                                              >  1:1538494/1‑149 (MQ=255)
                                                                          aGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAgtg                                                                           >  2:2808559/1‑149 (MQ=255)
                                                                              aaCAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACa                                                                       >  1:1231726/1‑149 (MQ=255)
                                                                                  aTAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACACAACAAAGGTTACAGAAc                                                                   >  1:35736/1‑149 (MQ=255)
                                                                                      aaTATTAAGCCAACAAATAA‑ACTGAGGAGGTT‑GGTACGCGATGCTCTCCTCTAGGAGGCAAAATGGCCCCAAATGTTTCGTCTTTTGGGGGGAAAGTGTGGAGTGTTGGCAGGGAAACTCGTTGACAAACCGAGGGGTACAGAACGAcg                                                               >  2:27120/1‑148 (MQ=255)
                                                                                      aaTATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACt                                                               <  1:1825285/149‑1 (MQ=255)
                                                                                       atatTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTg                                                              <  2:421962/149‑1 (MQ=255)
                                                                                             aGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATg                                                        >  2:1029119/1‑149 (MQ=255)
                                                                                               ccAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATCTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTc                                                      <  2:1091097/149‑1 (MQ=255)
                                                                                                caacaaATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAAGGACTGCCCATGTCg                                                     >  1:2644606/1‑149 (MQ=255)
                                                                                                 aacaaATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                                                                                                     >  1:599666/1‑52 (MQ=255)
                                                                                                 aacaaATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCaaaa                                                                                                                                                     <  2:599666/52‑1 (MQ=255)
                                                                                                 aacaaATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGa                                                    >  1:814193/1‑149 (MQ=255)
                                                                                                   caaATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAAAGACTGCCCATGTCGCtt                                                  >  2:7542/1‑149 (MQ=255)
                                                                                                     aaTAA‑CCTGAAAAAGTT‑TTTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTa                                                <  1:1029707/149‑1 (MQ=255)
                                                                                                      aTAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAg                                               >  1:1714543/1‑149 (MQ=255)
                                                                                                           aCTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAAt                                           >  1:111655/1‑149 (MQ=255)
                                                                                                             tGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAg                                         >  1:402249/1‑149 (MQ=255)
                                                                                                               aaaaaGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTgg                                                                                                       >  2:41066/1‑85 (MQ=255)
                                                                                                               aaaaaGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtt                                       >  2:2522032/1‑149 (MQ=255)
                                                                                                                 aaaGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGCAAACTGTGCAGTGTTGGCAGGCAAACTCGTTTACAAACCAAAGTGTACCGAACGACTGACCATGTCGATTTAGAAATAGtttt                                     >  2:1835389/1‑149 (MQ=255)
                                                                                                                 aaaGTT‑TGTCCGCGATGCTTTCATCTATGAGAAAAAATGGAACTAAAAGTTTCATCTTTTTGTATAAAACTCAACGTTATTTGCATTCATACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt                                     <  2:2977464/149‑1 (MQ=255)
                                                                                                                   aGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACGAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                                   <  2:1753885/149‑1 (MQ=255)
                                                                                                                   aGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTTTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                                   <  1:1928606/149‑1 (MQ=255)
                                                                                                                   aGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                                   <  1:879182/149‑1 (MQ=255)
                                                                                                                   aGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGCCATGCAAACTCGTTTACAAAACAAAGCGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt                                   <  1:2831394/149‑1 (MQ=255)
                                                                                                                        tGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                               <  2:2213212/149‑1 (MQ=255)
                                                                                                                        tGTCCGCGATGCTTTCCTCTATGAGTCAAAAGGGCCCCAAATGTTTCATCGTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                               <  2:2251488/149‑1 (MQ=255)
                                                                                                                        tGTCCGCGATGCTTTCCTCTATGAGTCAAAAAGGCCCCATATGTGTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa                               <  1:2056256/149‑1 (MQ=255)
                                                                                                                          tCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaagg                             >  2:110131/1‑149 (MQ=255)
                                                                                                                           ccGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTCTACAGAACGACTGTCCATGTCGATTTAGAAATAGTTTTTTgaaagga                            <  1:1955142/149‑1 (MQ=255)
                                                                                                                            cgcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaa                           >  1:2612102/1‑149 (MQ=255)
                                                                                                                             gcgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaa                          <  1:935671/149‑1 (MQ=255)
                                                                                                                              cgATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaaggaaag                         >  2:2579008/1‑149 (MQ=255)
                                                                                                                               gATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGGCCCTGTCGATTTAGAAATAGTTTTTTGACAGGAAagc                        >  1:2558642/1‑149 (MQ=255)
                                                                                                                                aTGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGCTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAagca                       <  2:2248821/149‑1 (MQ=255)
                                                                                                                                   cTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAATACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTACCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAgcagca                    <  2:2010434/149‑1 (MQ=255)
                                                                                                                                   cTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAgcagca                    <  2:977571/149‑1 (MQ=255)
                                                                                                                                      tCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGa                 >  2:775010/1‑149 (MQ=255)
                                                                                                                                        ctctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaa               <  1:444543/149‑1 (MQ=255)
                                                                                                                                         tctATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGaaaa              >  1:1251514/1‑149 (MQ=255)
                                                                                                                                           tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt            >  1:543590/1‑149 (MQ=255)
                                                                                                                                           tATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAAtt            <  2:961107/149‑1 (MQ=255)
                                                                                                                                             tGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAGCTCGTTTACAAAACAAAGTGTACAGAACGACTACCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa          <  2:513961/149‑1 (MQ=255)
                                                                                                                                             tGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa          >  2:126577/1‑149 (MQ=255)
                                                                                                                                               aGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaa        >  1:654729/1‑149 (MQ=255)
                                                                                                                                                 tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaa         <  1:1762852/146‑1 (MQ=255)
                                                                                                                                                 tCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAAct      <  2:2745044/149‑1 (MQ=255)
                                                                                                                                                   aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct    <  2:970755/149‑1 (MQ=255)
                                                                                                                                                   aaaaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAActct    <  1:1039820/149‑1 (MQ=255)
                                                                                                                                                     aaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGCAAATTAAAACTCTgg  >  2:2338151/1‑149 (MQ=255)
                                                                                                                                                     aaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTgg  >  1:1511116/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
TTCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAA‑ACTGAAAAAGTT‑TGTCCGCGATGCTTTCCTCTATGAGTCAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGG  >  NC_000913/4542839‑4543134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.