| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3670668 = | 68 (1.510) | 3 (0.070) | 3/264 | NT | 4.5% | coding (1078/1650 nt) | treF | cytoplasmic trehalase |
| ? | NC_000913 | 3670694 = | 63 (1.470) | coding (1104/1650 nt) | treF | cytoplasmic trehalase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3670819‑3670668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTG > NC_000913/3670694‑3670839 TGTTCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGC > 1:661149/1‑149 GTTCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGGGATGGCG > 1:538804/1‑149 GTTCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCG < 2:535862/149‑1 GTTCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCG < 2:688185/149‑1 TCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT < 2:609801/149‑1 TCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT < 2:777374/149‑1 TCGCGTCGCCAGTCGCAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAGCGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT < 2:706664/149‑1 TCGCGTCGCCAGCCGTCATCCCGGTAGATGCCGTTTTCATCAGCCCGGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT < 2:201407/149‑1 TCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGAT > 1:38344/1‑119 TCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGAT < 2:38344/119‑1 AGCGCCGAGATGTTGGCGATGGCGCTGAAAGGCGAAAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTCCCCGTCGCGATGCGGTAAACCGTTACCCCTGGGATGACGAAAACGGCATCTGCCGCGATTACGACTGGCGACGCGA > 2:480820/1‑149 GGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCG < 2:477161/149‑1 GCTGAAAGGCGAGGGAAAGGCAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCCCTGGGATGATGAAAACGGCATCTACCGCGATTGCGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTG > 2:492380/1‑149 TGTTCGCGTCGCCAGTCGTAATCGCGGTAGATGCCGTTTTCATCATCCCAGAGGTAACGGTTTACCGCATCGCGACGGGCACTGGCTTTCTGGCGGAACAGTGCTTCTGTCTCTTTCTCGCCTTTCAGCGCCGAGATGTTGGCGATGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3670819‑3670668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTG > NC_000913/3670694‑3670839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |