New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4542683 =	88 (0.820)	8 (0.080)	8/278	13.6	7.9%	intergenic (+49/‑433)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
	?	NC_000913	4542997 =	103 (1.020)					intergenic (+363/‑119)	fimE/fimA	tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAG  >  NC_000913/4542538‑4542831                                                                                                                                                  |                                                                                                                                                      taatttgCGTTACACGGCGAGTAAGGCTGCTCGTTTTGCCGGATTATGGGAAAGAAACAAACTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTgg                                                                                                                                                    <  2:1458460/144‑1 (MQ=255) tACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTgg                                                                                                                                                    <  2:1367022/149‑1 (MQ=255) gaCTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTgg                                                                                                                                                    <  2:1506334/148‑1 (MQ=255)     gtgCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAGGAGGTTTGATTTAACTTATTGTTAATAAAGTTAAAAAAACAAATAAATACAAGACATTTGGGGcc                                                                                                                                                >  1:5334/1‑149 (MQ=255)      tgCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCa                                                                                                                                               >  1:1455223/1‑149 (MQ=255)      tgCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCa                                                                                                                                               >  2:687102/1‑149 (MQ=255)         gTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAAc                                                                                                                                            >  1:1139600/1‑149 (MQ=255)                cGCCATTAATGCTGCTCGTCTTGCCGGATTAGGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGCGAAGAGGTTTGATTTAACTTATTGATAACAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCat                                                                                                                                     <  2:1002394/149‑1 (MQ=255)                  ccAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCatat                                                                                                                                   >  1:206192/1‑149 (MQ=255)                   aaGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCCCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATc                                                                                                                                  <  2:1394988/148‑1 (MQ=255)                    aGTGATGCTGCTCGTTTTGGCGGATTATGGGAAAGAAATCATCTCATAAACGAAAAATTAAAAAGGGAAGAGGTTTGATTTAAGTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCa                                                                                                                                 <  2:1232141/149‑1 (MQ=255)                     gTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                >  2:1476804/1‑149 (MQ=255)                       aaTGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataa                                                                                                                              >  2:930397/1‑149 (MQ=255)                         tgctgcTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAACATTAACCGGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaat                                                                                                                            >  1:348714/1‑149 (MQ=255)                          gctgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGATAAAAAACAAATTCAACACAAGACAATTGGGGCCAAACTGTCCATATCataaata                                                                                                                           >  2:632628/1‑149 (MQ=255)                            tgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAg                                                                                                                         <  1:1644427/149‑1 (MQ=255)                            tgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCAAATCACAAATAAg                                                                                                                         >  2:1497524/1‑149 (MQ=255)                                cGTTTTGCCGGATTAGAGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTAc                                                                                                                     <  1:637004/149‑1 (MQ=255)                                  ttttGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGt                                                                                                                   >  1:1690022/1‑149 (MQ=255)                                          taTTATGGGGAAGAAATAATCTCATAAATGAAAAAGTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACATTTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTtc                                                                                                           <  2:1509591/148‑1 (MQ=255)                                            ttATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTAttttttttt                                                                                                         >  2:338377/1‑146 (MQ=255)                                             ggtGGGAAACACATACGCTCATAAACGAAAAACTAAAAAGAGAAGCGGTGTGATTTAACTTATTGATAACAAAGCTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCa                                                                                                        <  2:49405/147‑1 (MQ=255)                                              aTGGGAAAGAAATACTCTCATAAACGAAAAATGAAAAAGAGAAGAGGTCTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATCTCATAAATAAGTTACGTATTTTTTCTCaa                                                                                                       <  1:1121206/149‑1 (MQ=255)                                              aTGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAGGCTGTGCATATCATAAATAAGTTACGTATTTTTTCTCaa                                                                                                       <  2:1183293/149‑1 (MQ=255)                                               tGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCGAg                                                                                                      >  2:293576/1‑149 (MQ=255)                                               tGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGACAAACTGTCCATATCATAAAAAAGTTACATATTTTTTCTCaac                                                                                                      >  2:922189/1‑148 (MQ=255)                                                 ggAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCa                                                                                                    >  2:1771518/1‑149 (MQ=255)                                                  gaaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCAt                                                                                                   >  2:1658485/1‑149 (MQ=255)                                                   aaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATa                                                                                                  >  1:401254/1‑149 (MQ=255)                                                      gaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTATCAAACATaaaa                                                                                               >  1:1176418/1‑149 (MQ=255)                                                       aaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATtaaaa                                                                                              >  2:1644519/1‑149 (MQ=255)                                                        aataatCTCCTAAGCGAAAAATGCAAAAGAGCTTAGGTTTGGTTCACAAGCCTCATGATACAGGTAAAAAAACAAACAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTAGTTTTTCTCAAGCATAAAAat                                                                                             <  1:850105/149‑1 (MQ=255)                                                          taatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGGTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAatat                                                                                           <  1:1181349/149‑1 (MQ=255)                                                              ctaaTACACGAAAAATTAAAAAGAGAAGAGTTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATCCAAGACAGTTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTaaa                                                                                       <  1:112792/146‑1 (MQ=255)                                                                  tAAACGAAAAATTTAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATTTCATAAATAAGTTACGTATTTTTTCTCAAGCATAACAATATTAAAAAAc                                                                                   <  1:1276078/149‑1 (MQ=255)                                                                    aaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTAATAATAAAGTTAAATAAACAAATAAATACAAGACAATTGGGGCCAAACTGACCATATCAAAAATAAGTAACGTATTTTTTCTCACGCAAAACAAGAATAAAAAACGa                                                                                 >  2:1158213/1‑149 (MQ=255)                                                                    aaCGAAAAAGTAAAAAGAGAAGATGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATGAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGa                                                                                 <  2:485722/149‑1 (MQ=255)                                                                      cGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACa                                                                               >  1:318516/1‑149 (MQ=255)                                                                       gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                              >  2:1414890/1‑149 (MQ=255)                                                                       gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                              >  2:1698490/1‑149 (MQ=255)                                                                        aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACcaa                                                                             >  2:445980/1‑149 (MQ=255)                                                                        aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaa                                                                             >  1:167765/1‑149 (MQ=255)                                                                          aacttAAAAAGATAAGAGGTTTGATATAACTTATGGATAGTAAAGTTAAAAAATCAAATAAATACAAGTCAATTGGGGCCATACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaaaa                                                                           <  2:1283249/146‑1 (MQ=255)                                                                           aaTTAAAAAGGGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAg                                                                          <  1:26726/149‑1 (MQ=255)                                                                            aTTAAAAAGAGGAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGc                                                                         <  2:954339/149‑1 (MQ=255)                                                                             ttAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATATAAATATTAAAAAACGACAAAAAGCa                                                                        <  1:1063045/149‑1 (MQ=255)                                                                             ttAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCa                                                                        <  1:1408731/149‑1 (MQ=255)                                                                                    gagaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAGCGACAAAAAGCATCTAACt                                                                 <  1:1295736/149‑1 (MQ=255)                                                                                     agaagagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTg                                                                >  2:244811/1‑149 (MQ=255)                                                                                        atagGTTGGAGTGACCTTACTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAAGTGGGTCCAAACTGTCCATATCATAAATAAGTTACGCATTTTTTCTCAAGCATAAAAATATTAAAAAACGCAGTAAATCCTCTAACTGttt                                                             <  2:1540963/147‑1 (MQ=255)                                                                                        agagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGttt                                                             <  2:1650089/149‑1 (MQ=255)                                                                                         gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCAATATCATAAATAAGGTACGTATATTTTATCAATCATTAAAATATTAAAAAACGACAAAAAGCATCTAAATGttgc                                                            >  2:1524481/1‑147 (MQ=255)                                                                                           ggTTTGATTAAACTTATTAATAAAAAAAATAAAAAAACAAATAAATACAAGACAATGGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGat                                                          <  2:1252011/149‑1 (MQ=255)                                                                                                   ttAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAat                                                 <  2:167765/149‑1 (MQ=255)                                                                                                   ttAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAat                                                 <  1:1658485/149‑1 (MQ=255)                                                                                                        ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTTGT‑ATGTAAATTAttt                                            >  2:304508/1‑149 (MQ=255)                                                                                                          aTTGATAAAAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCt                                          <  1:632628/149‑1 (MQ=255)                                                                                                            tGATAATAAAGTTAAAAAAACAAATAAATACAAGCCAATTGGGGCCACACTGTCAATATCATAAATAAGTTAGGTATTTTTTCCTACGCAAAAAAATTACAAGAAACGACAAAAAGCATGTAACTGTTTGAT‑CTGTAAATTATCTCTag                                        >  2:189090/1‑148 (MQ=255)                                                                                                                aataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTa                                    >  2:1609147/1‑149 (MQ=255)                                                                                                                 ataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCCTATCCTCAATACGTAACGTAATTAATTTCAAGGATATGAATATTAACAAACGACAAAAGGCATCTAACCGTTTGAT‑ATATAAGTTATTTCTATTGTaa                                   >  1:1306434/1‑149 (MQ=255)                                                                                                                 ataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTaa                                   <  1:1725120/149‑1 (MQ=255)                                                                                                                  taaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTaaa                                  >  1:512891/1‑149 (MQ=255)                                                                                                                  taaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTaaa                                  <  2:1560852/149‑1 (MQ=255)                                                                                                                  taaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTaaa                                  <  2:1374331/149‑1 (MQ=255)                                                                                                                   aaaGTTAAAAAAAGAAATAAATACAAGACAATTGGGGCCGAACTGTCCATATCATAAATAAGTTACGTATTTTTTTTTTTTTTTTTAAATATTAAAAAACAACAAAAAGCATCTAACTGTTTGTT‑ATGTAAATTATTTCTATTGTTaat                                 >  2:1088296/1‑149 (MQ=255)                                                                                                                    aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAaatt                                <  1:77244/149‑1 (MQ=255)                                                                                                                    aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAaatt                                >  1:650375/1‑149 (MQ=255)                                                                                                                       ttAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAaattaat                             <  2:321658/149‑1 (MQ=255)                                                                                                                          aaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTc                          >  1:175814/1‑149 (MQ=255)                                                                                                                          aaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTc                          >  1:607409/1‑149 (MQ=255)                                                                                                                           aaaaaGAAATATGTACTAGTTCATTGGGGCCAAACTGTCCATATCATTAATAAGTTACGGATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACT‑ATTGATGATTTTAATTATTTCTATTGTAAATTAATTTca                         <  2:1267776/149‑1 (MQ=255)                                                                                                                           aaaaaCAAATAAATACAAGACAGTTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTca                         <  1:1059237/149‑1 (MQ=255)                                                                                                                            aaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTcac                        <  1:687102/149‑1 (MQ=255)                                                                                                                            aaaaCAAATAAAAAAAAGAACATTGGGGCCCAACTGCCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCCTCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTcac                        <  1:293576/149‑1 (MQ=255)                                                                                                                             aaaCAAATAAATACATGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTcaca                       <  2:680295/149‑1 (MQ=255)                                                                                                                                 aaataaatACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACCAAAAGCATCTAACTGTTTGAT‑ATTTAAATTATTTCTATTGTAAATTACATTcacacaac                   >  2:898685/1‑145 (MQ=255)                                                                                                                                      aataCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCg              <  1:1271053/149‑1 (MQ=255)                                                                                                                                       ataCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGc             <  2:1673167/149‑1 (MQ=255)                                                                                                                                        taCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCt            <  1:1476804/149‑1 (MQ=255)                                                                                                                                         aCAAGACAATTGGGGCCAAACTGTCCATATCATCAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAAGTTCACATCACCTCCGCta           >  1:1143338/1‑149 (MQ=255)                                                                                                                                           aaGGCATTTGGGGCCAATCTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCtata         <  2:1479940/149‑1 (MQ=255)                                                                                                                                           aaGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCtgta         >  1:386185/1‑149 (MQ=255)                                                                                                                                           aaGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCtata         <  2:1455223/149‑1 (MQ=255)                                                                                                                                           aaGACAATTCGGGCCAAACCGTCCATATCATAAATAAGTTACGTCTTTTTTCTCAAGCCTAAAAATATTAAAACCCGACAAACGGCCTCTCACTGCTCGAC‑ATGTACATTAATGCCATCGTCAATCACCTTCACATCACCTCCGcccaa         >  2:527651/1‑145 (MQ=255)                                                                                                                                             gACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATg       >  1:1392862/1‑149 (MQ=255)                                                                                                                                             gACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACCGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATg       <  1:867330/149‑1 (MQ=255)                                                                                                                                                aaTTTGGGCCACACTGTTCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTACCTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTaa    <  1:527723/149‑1 (MQ=255)                                                                                                                                                 aTTGGGGCCAACCCGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACAACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTaaa   <  2:348714/149‑1 (MQ=255)                                                                                                                                                 aTTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTAGCTTGTCTCAAGCATAACAATATGAAAAAACGACAAGAAGCATCTATCTGTTTGCT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCGCCTCCGCTATATGTaaa   <  2:5334/149‑1 (MQ=255)                                                                                                                                                  ttGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg  <  1:1698490/149‑1 (MQ=255)                                                                                                                                                  ttGGGGCCAAACTGTCCATATCATAAATAAGTTAAGTATTTTTTCTCAAGCATAAAAATATTAAGAAGAGAAAATAAGCGTCGAACTGTTGGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg  >  2:450546/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                      TACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGAT‑ATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAG  >  NC_000913/4542538‑4542831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.