Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,394,7680TC21.1% 176.4 / 22.2 91T93A (ACT→GCT) nuoLNADH:ubiquinone oxidoreductase, membrane subunit L
Reads supporting (aligned to +/- strand):  ref base T (35/36);  new base C (1/18);  total (36/55)
Fisher's exact test for biased strand distribution p-value = 3.92e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACC  >  NC_000913/2394620‑2394916
                                                                                                                                                      |                                                                                                                                                     
ccGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGt                                                                                                                                                       >  1:1640556/1‑149 (MQ=255)
   aGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGac                                                                                                                                                    <  1:604987/149‑1 (MQ=255)
       aCATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGGAGCCCTCTTCACCGCGCAAGTACCAGGAGGCGTACAGGGG‑AATAAA‑GAAGCCGCCACCAGCGaccaca                                                                                                                                                >  2:1730296/1‑148 (MQ=255)
        gaTCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCg                                                                                                                                               <  2:152573/148‑1 (MQ=255)
         aTCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCga                                                                                                                                              <  1:1294581/149‑1 (MQ=255)
              cagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCa                                                                                                                                         >  1:1520435/1‑149 (MQ=255)
              cagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCa                                                                                                                                         <  1:1697188/149‑1 (MQ=255)
               agcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGCGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑ACTAAG‑GAAACCCACACCAGTGACCACCGAGAGCag                                                                                                                                        >  1:668861/1‑148 (MQ=255)
                gcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGACCAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATg                                                                                                                                       <  1:1564171/149‑1 (MQ=255)
                gcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATg                                                                                                                                       <  1:1613791/149‑1 (MQ=255)
                 cagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGACCATgg                                                                                                                                      >  1:222520/1‑149 (MQ=255)
                  cagTTCTCCGCAAGCACCATAACCCCCATGCTGGCGATGAACAGGCTGGTGTAAGCCAAAAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGCCCTACATGTG‑TATATT‑TTATCACAATACAGCGACCACCGAGAGCATGGt                                                                                                                                     <  2:151399/147‑1 (MQ=255)
                  agGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AGTAAG‑GAAACCCACACCAGTGACCACCGAGAGCGTGGt                                                                                                                                     >  1:1164690/1‑149 (MQ=255)
                  agGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGt                                                                                                                                     >  2:243045/1‑149 (MQ=255)
                  agGTTGGCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGt                                                                                                                                     <  1:477734/149‑1 (MQ=255)
                   ggTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGAG‑AATAGG‑GAAACCCACACAAGTGACCACCGAGCGCacagcc                                                                                                                                    >  2:1414277/1‑144 (MQ=255)
                     ttGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AGTAAG‑GAAACCCACACCAGTGACCACCTAGAGCATGGTcgg                                                                                                                                  >  1:131565/1‑147 (MQ=255)
                     ttGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAg                                                                                                                                  <  1:1523493/149‑1 (MQ=255)
                      tggcGGGAAGCACCAGAACCACCATGCTGGCGATGGACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGGGAGCATGGTCAGc                                                                                                                                 <  1:1217485/146‑1 (MQ=255)
                      tGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGc                                                                                                                                 <  1:1437990/149‑1 (MQ=255)
                      tGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGAAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGGCAGc                                                                                                                                 >  2:937304/1‑149 (MQ=255)
                         cGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGAc                                                                                                                              <  1:1034431/149‑1 (MQ=255)
                           gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGCCCACCGAGAGCATGGTCAGCGACAg                                                                                                                            >  1:1049773/1‑149 (MQ=255)
                           gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGCGCATGGTCAGCGACAg                                                                                                                            >  2:835482/1‑149 (MQ=255)
                           gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                            <  1:344943/149‑1 (MQ=255)
                           gCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAATAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                            >  1:1187160/1‑149 (MQ=255)
                            cAAGCACCAGAACCACCAGGGTGGCGATGAACAGGTTGGTGTAAGCTAAGAAGCGAGATTTGCCCTCTTCACCGCGCATATACCAGGCTGCGTACATGTG‑TTTTTGTTTTAACGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAgg                                                                                                                           <  2:411499/149‑1 (MQ=255)
                                cACCAGTGCCACCATGCTGGCGATGGACAGGGTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATCCCAGGAGGCGTACGTGTGTTTTTTG‑TATACTGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGt                                                                                                                       <  2:1552243/149‑1 (MQ=255)
                                cACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCAGATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCTCCGAGAGCATGGTCAGCGACAGGCCGt                                                                                                                       >  1:1242149/1‑149 (MQ=255)
                                 aCCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTc                                                                                                                      <  1:1452406/149‑1 (MQ=255)
                                       accaccATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCAc                                                                                                                <  1:236584/149‑1 (MQ=255)
                                         cacctTGCTGGCGATGAACAGTTGGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑TATATG‑TTTTAACGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCa                                                                                                              <  2:1539042/149‑1 (MQ=255)
                                         caccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCa                                                                                                              >  2:1386679/1‑149 (MQ=255)
                                           ccaTGCTGGCGATGAACAGGTTCGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAgg                                                                                                            <  1:1546541/149‑1 (MQ=255)
                                                cTGGCGATGAACACGTTGGTGTAAGCGAAGAAGCGAAAGTAGCCCTCTTCGCCCCTCATATACCAGGAGGCGTACATGTG‑TTTAAT‑TTATCCTGATCCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaaa                                                                                                       <  2:290620/149‑1 (MQ=255)
                                                 tGGCTATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCCCCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GATACCCACACTAGAGTAGACCGATAGCATAGTCAGCGACAGGCTGTCCAGCACCGGGTTaaaa                                                                                                      <  1:1307818/149‑1 (MQ=255)
                                                  ggCGTTGATCAGGTTGGTGTGAGCGAATGAGGGAGGGTAGCCCTGTTCCGCGCGACTATACCAGGGGGCGTACATGTG‑TTTTTT‑GTTTCCTGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑c                                                                                                    <  2:85139/149‑1 (MQ=255)
                                                  ggCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑c                                                                                                    <  1:467346/149‑1 (MQ=255)
                                                      aTGAACAGGTTTGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATTTG‑TATACCCGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGAt                                                                                                <  2:1090658/149‑1 (MQ=255)
                                                      aTGAACAGGTGGGGGTAAGCGAAGCAGCGAGAGTGGCTCTCTTCCCCGCGCATATCCCAGGAGGCGTACATGTG‑TTTTTG‑TTTTACTGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGAt                                                                                                <  2:1298990/149‑1 (MQ=255)
                                                       tGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTCCCTGTA‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATg                                                                                               >  1:1128718/1‑149 (MQ=255)
                                                         aaCAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑ATTAAT‑GTTACCCGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGtt                                                                                             <  2:1629753/149‑1 (MQ=255)
                                                         aaCAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGtt                                                                                             <  1:1165011/149‑1 (MQ=255)
                                                          aCAGGTTGGTGTAAGCGAAGAACCGTGAGTAGCTCTCTCCACCGCGCATAGCCCATGAGGCGTACATGTG‑ATTTTG‑TTTTACTGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTa                                                                                            <  2:929735/149‑1 (MQ=255)
                                                            aGGTTGGTGTAAGCGAAGGAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAT‑TATAACTAATACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTaaa                                                                                          <  2:1761100/149‑1 (MQ=255)
                                                            aGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTaaa                                                                                          <  1:1273451/149‑1 (MQ=255)
                                                             ggTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAg                                                                                         <  1:1440331/149‑1 (MQ=255)
                                                                tGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCGTCACCGCGCATATACCAGGAGGCGTACATGTG‑ATTTAT‑TTATCACGAAACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCg                                                                                      <  2:1466037/149‑1 (MQ=255)
                                                                   tgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCt                                                                                   >  1:1114382/1‑149 (MQ=255)
                                                                    gtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACAGCAGTGACCACCGAGAGCATGGCCAGCGAAAAGCCGTCCAGAACCAGGTAAAAA‑CCCATGTGAAAGTCGccgc                                                                                  >  2:159709/1‑147 (MQ=255)
                                                                     tAAGCGACGACGCGACTGTAGCCCTCTTCACCGCGCAGATACCAGGCGGCGTACATGTG‑AATAAG‑TAATCCCGCTCCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTAc                                                                                 <  2:1512434/149‑1 (MQ=255)
                                                                         cGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATAGCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGAc                                                                             >  1:1153661/1‑149 (MQ=255)
                                                                          gaagaaGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCAGGGTCAGCGACAGGACGTCCAGCGCCAGGGTAAAA‑CCGATGTTGAAGTCGCCGACCGACa                                                                            >  1:761203/1‑149 (MQ=255)
                                                                           aagaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGGTAAAGTCGCCTACCGACAt                                                                           >  1:720711/1‑149 (MQ=255)
                                                                             gaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATcc                                                                         <  1:1386831/149‑1 (MQ=255)
                                                                               agCAAGAGTAGCCCTCTTCACCGCGCATATACCCGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGGCCAGCACCAGGTTAAGA‑CCGATGTTAAAGTCGCCTACCGACATCCAc                                                                       <  1:1333046/149‑1 (MQ=255)
                                                                                  gaggGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑TATAAG‑TAATCCCGCACCCGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTc                                                                    <  2:1641045/149‑1 (MQ=255)
                                                                                  gagaGTAGCCCTCTCCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTc                                                                    <  1:1172637/149‑1 (MQ=255)
                                                                                      gTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCcaca                                                                <  1:1764806/149‑1 (MQ=255)
                                                                                       tAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAg                                                               >  1:644561/1‑149 (MQ=255)
                                                                                           ccTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaa                                                                                                        <  2:703957/105‑1 (MQ=255)
                                                                                           ccTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaa                                                                                                        >  1:703957/1‑105 (MQ=255)
                                                                                             tctTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctg                                                         >  1:125536/1‑149 (MQ=255)
                                                                                              ctTCACCGCGCATATACCCGGAGGCGTACATGTG‑AATAAG‑GAAACACACTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctgg                                                        <  2:223933/149‑1 (MQ=255)
                                                                                               ttCACCGCGCATATTCCAGGGGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCATCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggc                                                       <  1:1209078/149‑1 (MQ=255)
                                                                                               ttCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggc                                                       <  1:1584959/149‑1 (MQ=255)
                                                                                                tCACCGCGCATATCCCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggct                                                      <  1:1632798/149‑1 (MQ=255)
                                                                                                  aCCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGt                                                    <  1:1484445/149‑1 (MQ=255)
                                                                                                    cgcgCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACCGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                  >  1:23146/1‑149 (MQ=255)
                                                                                                    cgcgCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                  <  1:1386679/149‑1 (MQ=255)
                                                                                                           ataCCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCt                                           >  1:533728/1‑149 (MQ=255)
                                                                                                           ataCCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCt                                           <  1:120192/149‑1 (MQ=255)
                                                                                                               cAGGAGGCGTACATGTG‑ATTTAT‑GAATAACGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                       <  2:153230/149‑1 (MQ=255)
                                                                                                                   aggCGTAAATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTa                                   <  1:841908/149‑1 (MQ=255)
                                                                                                                   aggAGTACATCTG‑AATACG‑GAAACCCACACCAGTGACCATAGAAACCATGGTCAGCGACAGGCCGTACAGCACCAGGTTAAAA‑CCGATGTTAAAGCCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTa                                   <  1:334188/149‑1 (MQ=255)
                                                                                                                    ggCGTACATGGG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCTTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAg                                  <  1:792414/149‑1 (MQ=255)
                                                                                                                        tACATGTG‑AATAAG‑GATACCTGCAACAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa                              <  2:1187160/149‑1 (MQ=255)
                                                                                                                        tACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa                              <  1:1730296/149‑1 (MQ=255)
                                                                                                                            tgtg‑AATAAG‑GTATACCACACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATCTCTGCTCGCCGTTAGCGAAGaaa                          <  2:1211553/149‑1 (MQ=255)
                                                                                                                            tgtg‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGaaa                          <  1:243045/149‑1 (MQ=255)
                                                                                                                                 aaTAAG‑GAAACCCACACCAGTGACCACCGCCAGTTGCCGCTGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCac                      >  1:1762293/1‑148 (MQ=255)
                                                                                                                                    aaG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGc                   <  1:804127/149‑1 (MQ=255)
                                                                                                                                    aaG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGc                   >  1:1499783/1‑149 (MQ=255)
                                                                                                                                      g‑gAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCg                 >  1:827641/1‑149 (MQ=255)
                                                                                                                                           aCCCACACCAGTGACCACCGAGAGCATGGCCAGCGACAGGCCGTCCAGCACCAGGTTAAAC‑CCGCTGTTAAAGTCGCCTACCGAGATCCACGTCAACGGAGGCTGGCAGTATGTCTGCTCGGCGTTAGCGAGGAGATAGGCGCCGATaa             >  2:761810/1‑149 (MQ=255)
                                                                                                                                            cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGCTaaa            >  1:479691/1‑149 (MQ=255)
                                                                                                                                            cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGGCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAGGAAATCAACGCCGATaaa            >  2:1765491/1‑149 (MQ=255)
                                                                                                                                             ccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAg           >  1:1471829/1‑149 (MQ=255)
                                                                                                                                             ccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAg           >  1:1097236/1‑149 (MQ=255)
                                                                                                                                                   cAGTGACCACCGAGAGCATGGTCAGCGAGAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAGGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTAGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGtt     >  1:1161064/1‑149 (MQ=255)
                                                                                                                                                   cAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGCAGTTAAAGGCGCCTACCGACAACCACGTCCACACCGGCTGGCTGTATGTCTCCCCGCCGTTAGCGAGGAAACCCACGCCGAGGAcggcggct     >  2:321909/1‑147 (MQ=255)
                                                                                                                                                   cAGTCACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCCGGCCAAAACCCGACG‑TACACACCCCCACCGACCACCACGTCCACCCCGTCCCGCTGAATCCCCGCCCGCCGCCGGCGCAGCAACCAACGCCGAGAAcggcggac     >  2:308090/1‑147 (MQ=255)
                                                                                                                                                      tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTAcc  >  1:978473/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAA‑CCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACC  >  NC_000913/2394620‑2394916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑