BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2894836 =	NA (NA)	6 (0.090) +ATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCG	5/210	10.6	6.9%	noncoding (31/67 nt)	REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4614337 =	113 (1.210)	6 (0.090) +ATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCG	5/210	10.6	6.9%	noncoding (80/388 nt)	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

CGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCC  >  NC_000913/4614190‑4614484

   cGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTa                                                                                                                                                 >  1:1242896/1‑149 (MQ=255)

   cGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTa                                                                                                                                                 >  1:1241574/1‑149 (MQ=255)

    gggAACCGGCGGATGAGATTGCGCAAGGGTTGCTTAACAACCCGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTAc                                                                                                                                                <  1:209849/149‑1 (MQ=255)

      gAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAg                                                                                                                                              <  1:1314505/149‑1 (MQ=255)

      gAACCGGCGGATGAGACTGCCCAACGGGTGCTCAATAACACGTATACGTTGGTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAg                                                                                                                                              <  1:1355089/149‑1 (MQ=21)

        aCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGt                                                                                                                                            <  1:601699/149‑1 (MQ=255)

        aCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATCCCTACAGGt                                                                                                                                            <  2:1183631/149‑1 (MQ=255)

          cggtggATGAGTTTGCGCAGGCGTTGCTTAATAACCCGTATGCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGttt                                                                                                                                          <  2:107884/149‑1 (MQ=21)

          cggcggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCTTCCGGCAGTTGGCGCACAATGCCTGCTGCGACGCTTAACGCGTCTTATCATGCCTACAGGttt                                                                                                                                          <  1:1007298/149‑1 (MQ=255)

           ggcggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTtg                                                                                                                                         <  1:472191/149‑1 (MQ=255)

             cggATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTtgtg                                                                                                                                       <  1:15253/149‑1 (MQ=255)

              ggATGAGAGTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGc                                                                                                                                      <  2:1295727/149‑1 (MQ=255)

               gATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTAATGCGCCGCTTGTCGCGTCTTATCATGCCTACAGGTGTGTGcc                                                                                                                                     >  2:799946/1‑149 (MQ=21)

                    gaTTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTCCAGGTTTGTGCCGAAcc                                                                                                                                >  2:685030/1‑149 (MQ=255)

                    gaTTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGCTTGTGCCGAAcc                                                                                                                                >  2:1223015/1‑149 (MQ=255)

                     aTTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCCTATGCTGCCTACAGGTGTGTGCCGAACCg                                                                                                                               >  1:421921/1‑149 (MQ=255)

                      gtGCGCAAGCGTGGCTTAATACCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGt                                                                                                                              <  2:1223929/148‑1 (MQ=255)

                       tGCGCAAGCGCTGCGTAACAACACGTATACGTTGTTTAACGTGCCGTAGGCCGAATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTa                                                                                                                             <  2:1216418/149‑1 (MQ=255)

                        gcgcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAg                                                                                                                            <  1:1051233/149‑1 (MQ=255)

                         cgcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTggg                                                                                                                           >  1:333612/1‑149 (MQ=255)

                         cgcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCAGTAGTCCGGATGAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAgg                                                                                                                           >  1:752435/1‑149 (MQ=255)

                          gcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGc                                                                                                                          >  2:691896/1‑149 (MQ=255)

                          gcAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGCCTTATCATGCCTACAGGCTTCTGCCGACCCGtttgc                                                                                                                          >  1:1487901/1‑145 (MQ=21)

                           cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGcc                                                                                                                         <  1:910379/149‑1 (MQ=255)

                               ctttGCTTAATAACACGTATACGTTTTTTAACGTGCCGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGAt                                                                                                                     <  2:75105/147‑1 (MQ=255)

                                    cTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGc                                                                                                                >  1:1060091/1‑149 (MQ=255)

                                     ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGCACCGTAGGCCGGATAAGGCg                                                                                                               >  1:9887/1‑149 (MQ=255)

                                     ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTTCGCCGGATAAcgcg                                                                                                               >  2:674976/1‑149 (MQ=255)

                                     ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGAATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTGGGCCGGATAAGGCg                                                                                                               >  2:949840/1‑149 (MQ=255)

                                      taataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCCTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGt                                                                                                              >  1:941/1‑149 (MQ=255)

                                        ataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTGGGCCGGATAAGGCGTTc                                                                                                            >  1:105681/1‑149 (MQ=255)

                                        ataaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTc                                                                                                            >  1:1032979/1‑149 (MQ=255)

                                         taaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCa                                                                                                           >  1:441824/1‑149 (MQ=255)

                                           acacGTATACGTTGTTTACCGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcg                                                                                                         <  2:1338710/149‑1 (MQ=255)

                                           acacGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGa                                                                                                                      <  1:1366000/136‑1 (MQ=255)

                                              cGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcgccg                                                                                                      <  2:227381/149‑1 (MQ=255)

                                                  taCGTTGTTTCGCGGGCCGTGGGCCGGATAAGGCGTTCACGCCGCCTCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATc                                                                                                  <  2:1434633/149‑1 (MQ=17)

                                                   aCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATGAGGCGTTCAcgccggaccc                                                                                                 >  2:1047749/1‑144 (MQ=255)

                                                    ccttgttTAACCTGCCGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                                                                <  1:421599/147‑1 (MQ=255)

                                                     gttgttTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGtt                                                                                                             <  1:419379/135‑1 (MQ=255)

                                                         tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGt                                                                                           >  1:386211/1‑149 (MQ=255)

                                                         tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGt                                                                                           >  1:1156885/1‑149 (MQ=255)

                                                          ttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGGGACGCTTGACGCGTCTTATCATGCCTACAGGTTTGTTCCGGACCGTCGGCCGGATAAGGCGTTCCCCCCGCATCCGGCGGtt                                                                                          >  1:487307/1‑149 (MQ=14)

                                                              cGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCAGCAGTTGGCACACAATGCCTGGTGCGACGCTTAGCGCGTCTTATCGTGACTACAGGTTTGTGCCGAACCGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGGTGgcg                                                                                      >  1:1004241/1‑149 (MQ=14)

                                                                 gCCGAAGGCCGGATAAGGCGGTACCGCCGCATCCGGGAGTTGGCACACAGTGCCGGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGcac                                                                                   <  2:1487901/149‑1 (MQ=14)

                                                                  ccGTAGGCCGGATAAGGGGTACCGGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGcaca                                                                                  >  2:1507155/1‑149 (MQ=255)

                                                                   cGTAGGCCGGATAAGGCGTCCACGCCGCATCCTGTAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTCCAGGTTTGTGCCGAACTGTAGGCCGGATAAGGCGCTCACGCCGCATCCGGCAGTTGGCGCACaa                                                                                 <  1:228763/149‑1 (MQ=14)

                                                                    gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGTTGGAGCAAAATGCCTGAACCGACGCTTAACGCGTCTTATCATGCCTAAAGGTCTGTGCCGAACCCTCGGCCGTATAAGGCGTTCCCCCCGCATCCGGCAGTAGgcgggaaaa                                                                                >  2:568508/1‑143 (MQ=11)

                                                                       ggCCGGATAAGGCGTTCCCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGcc                                                                             <  1:844661/149‑1 (MQ=255)

                                                                           ggATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGAt                                                                         <  1:1474189/149‑1 (MQ=255)

                                                                               atgcgtgtCACGCCGCAGCCGGCGCTGGGAGCAGGAGGCCGGATGCGCCGATTAACGCGTCTTATCATGCCTACCGGTTTGTACCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGa                                                                     <  2:756201/142‑1 (MQ=11)

                                                                                aGGCGTTCACGCCGCGTGCGGGAGGTGGCGCACAATCCCGGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGAc                                                                    <  2:51989/149‑1 (MQ=14)

                                                                                  gCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGc                                                                  <  1:1024587/149‑1 (MQ=255)

                                                                                    gTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCtt                                                                >  2:295610/1‑149 (MQ=255)

                                                                                    gTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCtt                                                                <  1:493995/149‑1 (MQ=255)

                                                                                        aCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTcg                                                            >  1:636359/1‑149 (MQ=255)

                                                                                        aCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCACGCGGCGGCTGGCGCGCAAGGCCTGAGGCGTCGCCTgccc                                                            >  2:731782/1‑146 (MQ=14)

                                                                                         cgccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTcgc                                                           <  1:296105/149‑1 (MQ=255)

                                                                                         cgccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgc                                                           >  1:791400/1‑149 (MQ=255)

                                                                                            cgcATCCGGCAGGGGGCGCACGATGCCTGGTGCGACGCTTAACGCGTCTTATCATGCCTACAGGTGTGTGTCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTc                                                        <  2:401632/149‑1 (MQ=14)

                                                                                             gcATCCGGCAGTTGGCGCACAAGGCCTGATGCGACCCTTAACGCGCCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCt                                                       <  1:577114/149‑1 (MQ=255)

                                                                                                  ctgCAGTTGGCTCACATTGCCTTGTGTGTCGGCGAACGCGGCTTATCGTGCCTACAGGTTTGTGGCGAGCCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCa                                                  <  2:465965/147‑1 (MQ=14)

                                                                                                  cGGCAGTTGGCGCACAAGGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCa                                                  <  2:553961/149‑1 (MQ=255)

                                                                                                   ggcgttgggCGCCCAGTGCCTGATGCGCCGCTTAACGCGTCTTATCCTGCCTACAGGTGTGTCCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCAt                                                 <  2:1401077/142‑1 (MQ=14)

                                                                                                   ggCAGTTGGCGCACAATGCCTGATGCGACGCTCTTTTTTTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTCTCAt                                                 >  2:337781/1‑149 (MQ=11)

                                                                                                        tgggCGCACACTGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTa                                            <  1:144504/147‑1 (MQ=255)

                                                                                                           gcgcACAATGCCTGTTGCGCCGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACaa                                         <  1:51173/149‑1 (MQ=255)

                                                                                                           gcgcACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAAGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTTGCGCACAATGCCTGATGCGACGCTGGTCGCGTCTTTTCAGGCCTACaa                                         >  1:29936/1‑149 (MQ=11)

                                                                                                            cgcATAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATa                                                                                                                    <  1:1338779/73‑1 (MQ=21)

                                                                                                            cgcACAATGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATa                                                                                                                    >  2:1338779/1‑73 (MQ=255)

                                                                                                            cgcACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAg                                        >  1:71991/1‑149 (MQ=255)

                                                                                                             gccgcaggCCTGATGCGACGCTTAACGCGTCTTATAATGCCTACCGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGt                                       <  2:669548/142‑1 (MQ=255)

                                                                                                             gcACAATGCCTGATGCGACGCTTAACGCGTCTTATCATCCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGt                                       <  1:1153057/149‑1 (MQ=255)

                                                                                                               acaATGCCTGATGCGACGCTTATCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGa                                                                                                                      <  2:342051/68‑1 (MQ=18)

                                                                                                                 gaTGCCGGATGCGCCGCTGAACGCGTCTTATCATGCCTTCCGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCtgt                                   <  2:1448409/148‑1 (MQ=14)

                                                                                                                 aaggcttGATGCGACGCTGCACGCGTCTTATCCTGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCtgt                                   <  2:1291032/143‑1 (MQ=14)

                                                                                                                 aaTGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGCTGCGACGCTTGTCGCGTCTTATCCTGCCTACAAGTCtgt                                   >  2:498604/1‑149 (MQ=255)

                                                                                                                   tGCCTGATGCGAGGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc                                 <  2:776614/149‑1 (MQ=255)

                                                                                                                   tGCCTGATGCGACGCTTATCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGTTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc                                 <  1:992900/149‑1 (MQ=255)

                                                                                                                   tGCCGGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGc                                 <  2:876921/149‑1 (MQ=255)

                                                                                                                        gagcacccGCTTAACGCGTCCTATCATGCCAACCGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAAc                            <  2:706228/142‑1 (MQ=14)

                                                                                                                              aCGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTgac                                                             <  2:607599/110‑3 (MQ=14)

                                                                                                                              aCGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTgac                                                             >  1:607599/1‑108 (MQ=255)

                                                                                                                                gCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAAt                                                                                >  1:1083149/1‑89 (MQ=255)

                                                                                                                                 cTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATg                                                                        >  2:900437/1‑96 (MQ=39)

                                                                                                                                    agctcgTCTTATCATGCCTACCGGTTTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGAt                <  2:360049/145‑1 (MQ=255)

                                                                                                                                    aaCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTCGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGAt                >  1:1471798/1‑149 (MQ=255)

                                                                                                                                     aCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGCCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGACTAAAAGTCTGTGCCGCACCGTAGGCCgggtc               >  1:763798/1‑146 (MQ=14)

                                                                                                                                       gcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTCTGTGCCGAACCGTAGGCCGGATAAg             >  1:798339/1‑149 (MQ=255)

                                                                                                                                       gcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCAGAACCGTAGGCCgggtcag             >  2:953984/1‑144 (MQ=255)

                                                                                                                                       gcctCTTATCACGCCTTCAGGTGTGTCCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAg             <  2:1383834/146‑1 (MQ=14)

                                                                                                                                          tCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGAtccggca          >  2:356002/1‑143 (MQ=21)

                                                                                                                                          tCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCg          <  1:1507155/149‑1 (MQ=255)

                                                                                                                                           cTTATCATGCCTATAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGt         <  1:1296520/149‑1 (MQ=255)

                                                                                                                                              ttCATGCCTGCGGGTGTGGGCCGAACCGTAGGCCGGATGAGGCGTCCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCa      <  1:408760/148‑1 (MQ=14)

                                                                                                                                               tCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCCGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTc                                                        >  1:523023/1‑98 (MQ=255)

                                                                                                                                               tCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTc                                                        <  2:523023/98‑1 (MQ=39)

                                                                                                                                                 aTGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcgc   <  1:1180771/149‑1 (MQ=255)

                                                                                                                                                 aTGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGGCGCGTCTTATCATGCCCACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcgc   >  2:1006861/1‑149 (MQ=255)

                                                                                                                                                  ggCCTACGGGTTTTTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCGTATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcgcc  <  2:334728/148‑1 (MQ=255)

CGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCC  >  NC_000913/4614190‑4614484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.