Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,188,484 Δ27 bp coding (3136‑3162/4224 nt) rpoC → RNA polymerase, beta prime subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4188484 4188510 27 91 [0] [0] 90 rpoC RNA polymerase, beta prime subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41884830 (0.000)87 (0.950) 68/286 0.3 100% coding (3135/4224 nt) rpoC RNA polymerase, beta prime subunit
?NC_000913 4188511 = 0 (0.000)coding (3163/4224 nt) rpoC RNA polymerase, beta prime subunit

AAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATA  >  NC_000913/4188335‑4188631
                                                                                                                                                    |                                                                                                                                                    
aaGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACC                                                                                                                                                      >  2:71530‑M1/1‑149 (MQ=255)
 aGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCg                                                                                                                                                     <  2:465689‑M1/149‑2 (MQ=255)
      cTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACGggtctg                                                                                                                                                >  2:1334378‑M1/1‑143 (MQ=255)
       ttACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgt                                                                                                                                               >  2:890404‑M1/1‑142 (MQ=255)
          cGGTGCGGTACTGGCGAAGGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGACGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtctt                                                                                                                                            <  2:902850‑M1/149‑11 (MQ=255)
          cGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGGTGGGGGCGAAACCGTTGCAAGCTGGGACCCGCACACCATGCCGGTTATCACCGAAGGAAGAGGGTTGGTACGCTTTACTGACATGATCGACGGCCCGACCggtctgtctg                                                                                                                                            >  2:1425074‑M1/1‑139 (MQ=255)
          cGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGGAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtctt                                                                                                                                            <  1:451642‑M1/149‑11 (MQ=255)
           ggTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttc                                                                                                                                           >  1:827662‑M1/1‑138 (MQ=255)
           ggTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCGGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttc                                                                                                                                           <  1:1239206‑M1/149‑12 (MQ=255)
                  tACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtg                                                                                                                                    <  1:1143239‑M1/149‑19 (MQ=255)
                       gCGAACGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCCTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttct                                                                                                                               <  2:802075‑M1/149‑24 (MQ=255)
                       gCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACCGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttct                                                                                                                               >  2:618177‑M1/1‑126 (MQ=255)
                        cGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctg                                                                                                                              >  2:1288436‑M1/1‑125 (MQ=255)
                          aaaGGCGCTGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGGCAgggctgtcttcgcaggtggttctgga                                                                                                                            >  2:730061‑M1/1‑123 (MQ=255)
                          aaaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACCGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGGTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctgga                                                                                                                            <  2:954188‑M1/149‑27 (MQ=255)
                            aGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggatt                                                                                                                          >  2:592019‑M1/1‑121 (MQ=255)
                               cgtaggcgaaCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccg                                                                                                                       <  2:941709‑M1/145‑32 (MQ=255)
                               cGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccg                                                                                                                       <  1:143023‑M1/149‑32 (MQ=255)
                                 aTGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGCACGCGAGACCggactggcttcgctggggatgctggagtcggca                                                                                                                     >  2:1214863‑M1/1‑116 (MQ=255)
                                      gAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacg                                                                                                                <  2:276504‑M1/149‑39 (MQ=255)
                                      gAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacg                                                                                                                >  2:1397685‑M1/1‑111 (MQ=255)
                                        aCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCGCCGAAGTAAGCGGTTGTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgcgggtcgttcgggattccgcaaaccgta                                                                                                              >  2:19010‑M1/1‑109 (MQ=255)
                                        aCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGTAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgta                                                                                                              <  1:1051603‑M1/149‑41 (MQ=255)
                                                 tGGCGGCGAAACCGTTGCAAACTGGGTCCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTGTCCTGACATGATCGACGCACAGACCggtctgtcttcgctggtggttctggcttccgcagcgcgtaccggaggtg                                                                                                     >  1:562263‑M1/1‑100 (MQ=255)
                                                 tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtg                                                                                                     >  1:1311423‑M1/1‑100 (MQ=255)
                                                 tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtg                                                                                                     >  1:900733‑M1/1‑100 (MQ=255)
                                                   gcggcgAAACCGTTGCAAATTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggt                                                                                                   <  1:629293‑M1/149‑52 (MQ=255)
                                                     ggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaa                                                                                                 <  1:999676‑M1/149‑54 (MQ=255)
                                                      gcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaa                                                                                                >  2:32790‑M1/1‑95 (MQ=255)
                                                        gAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaaga                                                                                              >  2:403119‑M1/1‑93 (MQ=255)
                                                         aaaCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagat                                                                                             <  1:1504303‑M1/149‑58 (MQ=255)
                                                           aCCGTTTCAACCTGGGACCCTCACCCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCgtactgtcttcgctggtggttctggattccgcagaacgtaacgcaggtggtaaagatct                                                                                           <  2:1003463‑M1/149‑60 (MQ=255)
                                                           aCCGCTGCAAACTGGGATCCGCACACCCTGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTAATGACATGAGCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaatatct                                                                                           <  2:1111930‑M1/149‑60 (MQ=255)
                                                               ttGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgt                                                                                       >  1:151441‑M1/1‑86 (MQ=255)
                                                                tGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtc                                                                                      <  1:858801‑M1/149‑65 (MQ=255)
                                                                   aaaCTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccgg                                                                                   >  1:294879‑M1/1‑82 (MQ=255)
                                                                       tGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctgggttccgcagaacgtaccgcagggggtaaagatctgcgtcgggcact                                                                               >  1:1026424‑M1/1‑78 (MQ=255)
                                                                         ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactga                                                                             >  2:521425‑M1/1‑76 (MQ=255)
                                                                         ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcagggggtaaagatctgagtcgggcactga                                                                             >  2:1120995‑M1/1‑76 (MQ=255)
                                                                         ggACCCGCACAACATGCCGGTTATCACCGAAGGAAGCGGTTTTGTACGGTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactga                                                                             <  1:593209‑M1/149‑74 (MQ=255)
                                                                            cccGCACACCATGGCGGTTATCACCGGAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaa                                                                          <  2:1399216‑M1/149‑77 (MQ=255)
                                                                               ccaacccatgccGGTTATCCCCGGAGTAAGCGGTTTTGTACCCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcg                                                                       <  2:463218‑M1/144‑80 (MQ=255)
                                                                                cacaCCGTGCCGGTCATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGACCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgt                                                                      <  2:804201‑M1/149‑81 (MQ=255)
                                                                                cacaCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgt                                                                      <  1:32790‑M1/149‑81 (MQ=255)
                                                                                cacaCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgt                                                                      <  1:236070‑M1/149‑81 (MQ=255)
                                                                                 acacCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgtt                                                                     <  1:1329735‑M1/149‑82 (MQ=255)
                                                                                 acacCATACCGGTTATCACCGAAGTAAGCCGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCagtctgtcttccctggtcgtcctggactccgcacaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgtt                                                                     <  1:1556051‑M1/149‑82 (MQ=255)
                                                                                   acCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttga                                                                   <  1:618177‑M1/149‑84 (MQ=255)
                                                                                   acCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttga                                                                   <  1:521425‑M1/149‑84 (MQ=255)
                                                                                     cATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatg                                                                 <  1:1397685‑M1/149‑86 (MQ=255)
                                                                                     cATGCCGGTTATCACCGAAGTAAACGGTTTTGTACGCTTTCCTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcaggacgtaccgcagggggtcacgatctgcgtccggcactgaaaatcgttgacg                                                                 >  2:509674‑M1/1‑64 (MQ=255)
                                                                                      aTGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgc                                                                >  2:221872‑M1/1‑63 (MQ=255)
                                                                                               aTCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaa                                                       <  2:1479784‑M1/149‑96 (MQ=255)
                                                                                                tCACCGAAGTAAGCGGTTTTGTACGCTTAACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaac                                                      >  1:937059‑M1/1‑53 (MQ=255)
                                                                                                 cACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagcacgttccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacg                                                     <  2:1494205‑M1/149‑98 (MQ=255)
                                                                                                  aCCGAAGTAAGCGGTTTTGTACGATTAACTTTAAGGATTGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtgttaaagatctgcgtcgggcactgaaaatcgttgatgctcaggggaaaga                                                    >  1:760025‑M1/1‑51 (MQ=255)
                                                                                                   ccGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgac                                                   <  1:1346642‑M1/149‑100 (MQ=255)
                                                                                                   ccGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgac                                                   <  1:1354834‑M1/149‑100 (MQ=255)
                                                                                                   ccGAAGTAAGCGGTTTTGTACGCTATACTGACATGATAGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtacggcaatgaaaatcgttgatgatcagggtaacgac                                                   >  1:1221854‑M1/1‑50 (MQ=255)
                                                                                                   ccGAAGTAAGCGGTTTGGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatactcagggtaacgac                                                   >  1:974882‑M1/1‑50 (MQ=255)
                                                                                                      aaGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgtt                                                >  1:186410‑M1/1‑47 (MQ=255)
                                                                                                       actaaGGGGTTTTGTACGCTTTAGTGCCATGATCGGTGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttc                                               <  2:469673‑M1/147‑104 (MQ=255)
                                                                                                         tAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaagcgttgatgctcagggtaacgacgttctg                                             <  1:531005‑M1/149‑106 (MQ=255)
                                                                                                           aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgat                                           <  1:403119‑M1/149‑108 (MQ=255)
                                                                                                           aGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgat                                           <  2:186410‑M1/149‑108 (MQ=255)
                                                                                                            gCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggtttccgcagaacgtaccggaggtggtaaagggcatcggccggcactgaaaatcgttgatgctcagggtaacgtcgttctgatc                                          >  1:297311‑M1/1‑41 (MQ=255)
                                                                                                               gTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatccca                                       >  2:619661‑M1/1‑38 (MQ=255)
                                                                                                                ttttGTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccag                                      <  1:1288436‑M1/149‑113 (MQ=255)
                                                                                                                  ttGTACGCTTTACTGACATGATCGACGGCCAGACCggtaagttagcgctggtggttaaaccattcacagaacgcaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggt                                    >  2:331122‑M1/1‑35 (MQ=255)
                                                                                                                    gTACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacggaccgcaggtggtaaagatctgcgtgcggtactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtac                                  <  1:221872‑M1/149‑117 (MQ=255)
                                                                                                                     tACGCTTTACTGACATGCTCGACGGCCAGACCggtatgtctgtgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtacc                                 <  1:675379‑M1/149‑118 (MQ=255)
                                                                                                                     tACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtacc                                 >  1:660569‑M1/1‑32 (MQ=255)
                                                                                                                     tACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtacc                                 >  2:1246192‑M1/1‑32 (MQ=255)
                                                                                                                     tACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttcggatcccaggtacc                                 >  2:232358‑M1/1‑32 (MQ=255)
                                                                                                                     tACGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttagctgatgatgctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtacc                                 <  1:890404‑M1/149‑118 (MQ=255)
                                                                                                                      aCGCTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccg                                <  2:151441‑M1/149‑119 (MQ=255)
                                                                                                                         cTTTACTGACATGATCGACGGCCAGACCggtctgtcttcgctgggggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgata                             <  1:1504793‑M1/149‑122 (MQ=255)
                                                                                                                             aCTGACATGATCGACGGCCGGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgcc                         >  1:1129072‑M1/1‑24 (MQ=255)
                                                                                                                                gACATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagc                      <  1:686438‑M1/149‑129 (MQ=255)
                                                                                                                                 aCATGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcg                     >  1:1478270‑M1/1‑20 (MQ=255)
                                                                                                                                 aCATGATCGACGGCCAGACCggtctgtcttcgctggtggttcgggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatccttggtgctcagggtaacgacgttctgatcccaggtaccgatatgccagcg                     >  2:1029435‑M1/1‑20 (MQ=255)
                                                                                                                                   aTGATCGACGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagggca                   >  1:820334‑M1/1‑18 (MQ=255)
                                                                                                                                    agaTCGACGGCCAGACCggtcagtcttcgctggtggtgctggattccgcagaacgtaccgcaggtggtaacaatatgcgtacagcactgaaaatcgttgatgctcagggtaacgacgtactgatcccaggcaccgatatgccagcgcag                  >  2:942160‑M1/2‑17 (MQ=255)
                                                                                                                                          ccgGCCAGACCggtctgtcttcgctggtggttctggagtccgcagcacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcgcagtacttc            <  2:515725‑M1/148‑139 (MQ=255)
                                                                                                                                          aCGGCCAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgctatgccagcgcagtacttc            >  2:679855‑M1/1‑11 (MQ=255)
                                                                                                                                           cGGCCAGACCggtcggtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcgcagtacttcc           <  1:571134‑M1/149‑140 (MQ=255)
                                                                                                                                            ggCCAGTCCggtctgtgctcggtggaggttctggattccgcagaacgtaccggaggtggtaaaggtctgagtacggccttgaaaatcggtgatggtcagggtaacgccgttctgatcccaggtaccgatatgccagcgcagtacttcct          <  2:49965‑M1/149‑141 (MQ=255)
                                                                                                                                               cAGACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcgcagtacttcctgcc       >  2:1320054‑M1/1‑6 (MQ=255)
                                                                                                                                                 gACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcgcagtacttcctgccgg     <  2:900733‑M1/149‑146 (MQ=255)
                                                                                                                                                 gACCggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcgcagtacttcctgccgg     <  2:399802‑M1/149‑146 (MQ=255)
                                                                                                                                                    cggtctgtcttcgctggtggttctggattccgcagaacgtaccgcaggtggtaaagatctgcgtccggcactgaaaatcgttgatgctcagggtaacgacgttctgatcccaggtaccgatatgccagcgcagtacttcctgccgggca  >  1:535418‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATA  >  NC_000913/4188335‑4188631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: