Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,361,548 | 0 | C | G | 20.8% | 178.6 / 16.2 | 77 | G221A (GGT→GCT) | rhmR | putative DNA‑binding transcriptional regulator for the rhm operon |
Reads supporting (aligned to +/- strand): ref base C (31/30); new base G (1/15); total (32/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.25e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGTGGAT > NC_000913/2361406‑2361695 | gggTCATGATGTTCTCCATTCTTAGGAGGCTTGTAAGTCGAAGGGACTTTTCCATCCCAACAGCCGTGAAATATCCCTGGCGCAGGCAATGGCCTGGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTACGCGGGTACCGacca < 2:399521/149‑1 (MQ=255) gggTCAGGATGTTCTCCATTGTTATGAGGCTTGTAATTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGacca < 1:568866/149‑1 (MQ=255) ggTCATGGTGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGaccac < 1:818072/149‑1 (MQ=255) ggTCAAGATGTTCTCCGTTGTTATGAGGCTTGTAAGTCAAAGTGACTTTTCCACCCCAACAGACGGGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGaccac < 1:283413/149‑1 (MQ=255) gTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCCGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGaccacc < 1:985280/149‑1 (MQ=255) tCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGAATTCTTCATTGATTTGTAGGCGGGTAGCGGCCACCg > 2:602595/1‑149 (MQ=255) cATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGCATTCTTCATTGATTTGTAAGCGGGTACCGACCACCga > 2:568601/1‑149 (MQ=255) tgTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCg < 1:200366/149‑1 (MQ=255) ttCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGATACGGCGACCACCGAGATCGCa < 2:1156728/149‑1 (MQ=255) tctcCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAg < 1:785783/149‑1 (MQ=255) ccccATTGTGATGAGGCTTGTAAGCCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGTTTTGTAATGGGGCGGCGACCACCGAGATCGCAGc < 2:1030588/147‑1 (MQ=255) tcCCTTGTTATGCAGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCCGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTGTTTTGTAATGATACGGCGACCACCGAGATCGCAGCg < 2:1018980/149‑1 (MQ=255) tcCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGTTTTGTAAGCGGGCGCCGACCACCGAGATCGCAGCg < 2:1018567/149‑1 (MQ=255) tcCATTGGTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTGTTTTGTAATGATACGGCGACCACCGAGATCGCAGCg < 2:1213495/149‑1 (MQ=255) ttATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCt > 1:650342/1‑149 (MQ=255) tATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATCATCACGGTATTCTTCTTTTTTTTTTAATGGTACGGCGACCACCGAGATCGCAGCGGTAAGCTc < 2:768705/149‑1 (MQ=255) tATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTc < 1:1068456/149‑1 (MQ=255) aTGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATCATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCg > 1:565279/1‑149 (MQ=255) aGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTCAGCGGGTACCCACCACCGAGATCGCAGCGGTAAACTCGTTa > 1:534/1‑149 (MQ=255) gCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGGTTTGTACGCGGGTACCGGCCACCGGAATCGCGGCGATATGGTCGGTAtt > 2:731605/1‑149 (MQ=255) tGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGc < 1:384534/149‑1 (MQ=255) aGTCAAAGGGACTCTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCTCGCCAGATAATCACGGTATTCGTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTa < 1:482897/149‑1 (MQ=255) gTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGGTTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTGTTGGCGTTaa > 1:720837/1‑149 (MQ=255) tccaaGGGACTCTGCCACCCCAACAGACGTGAAATATCCCTTGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGATACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTaaa < 2:371432/146‑1 (MQ=255) tCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCCTGCCCGCCAGAGAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGttgag > 2:142279/1‑146 (MQ=255) cAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAac > 2:951260/1‑149 (MQ=255) aaGGGACTTTTCCATCCCAACCGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGATACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAacac < 2:1207674/149‑1 (MQ=255) aaGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAacac < 1:1213098/149‑1 (MQ=255) aaGGGACTTTTCCATCCCAACAGACGTGAAATAGCCCGGGCTCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAacac < 1:231416/149‑1 (MQ=255) gggACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGATACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCg < 2:1089746/149‑1 (MQ=255) ggACTTTTCCATCCCAACAGACGTGAAATAGCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGAAAGCGGGTACCGACCACCGAGAGCGCAGCGGTAAGCTCGGTATTGGCGTTAAAAACCgg > 1:649936/1‑149 (MQ=255) gcctgttCCGTCCCAACAGACGTGAGATCTCCCTGGCGCCGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTGTAATGGTACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGgc < 2:1142357/144‑1 (MQ=255) gACTTTTCCACCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGgc < 1:163040/149‑1 (MQ=255) cccttttCATCCCAACAGACGTGAAATGTCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGgcg < 1:373207/146‑1 (MQ=255) ttttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTCAGGCCGTTAGTGGCGGTAAACCCCGgccga > 2:229226/1‑146 (MQ=255) ttttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCa > 1:1108931/1‑149 (MQ=255) tttCCATCCCAACAGACGTGAAATATCCCTGGCGCCGGCAATGGCCTTGCCCGCCAGATAATCCCGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAg < 1:378787/149‑1 (MQ=255) ccATCCCAACAGACGTGAAACATCCCCGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCAGTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGa < 1:258495/149‑1 (MQ=255) cATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCGCGTTATTGGCGTTAAACACCGGCGCAGCGac > 1:1080928/1‑149 (MQ=255) aTCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGaca > 2:682937/1‑149 (MQ=255) aTCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCCTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTACGCGGGTACCGACCACCGACATCGCAGCGGTAACCTCGTGATTGGCGGTAAACACCGGCGCacgcgca > 2:594558/1‑143 (MQ=255) cccAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGaacca > 1:426174/1‑145 (MQ=255) cAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATCATAACGGTATTCTTCATTTATTTGTAAGCGGGTAGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAAc < 2:1126104/149‑1 (MQ=255) aCGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACAt > 1:820885/1‑149 (MQ=255) tGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCgg > 1:722585/1‑149 (MQ=255) cTGGCGCAGGCAATGGCCTTGCCCGCCAGATCATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGGTAAACACCGGCGCCGCGACAGAACCGCCAGCGGCGTAATCGTc > 2:564742/1‑149 (MQ=255) tGGCGCAGGCAATGTCCTTGCCCCCCAGATAATCACGGTATTCTTCTTTGTTTTTTAAGGGTGTGCCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCg < 2:650342/149‑1 (MQ=255) tGGCGCAGGCAATGGCCTTGCCCGCCAGATTATCACGGTCTTCTTCTTTTTTTTTTAAGGGTACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCg < 2:510339/149‑1 (MQ=255) cAGGCAATGGCCTTGCCCGCCAGATAATCGCGGTATGCTTCTTTGTTTTTTAATGGTACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGtt < 2:161580/149‑1 (MQ=255) atgCAATGGCCTTGCCGGCCAGATAATCAGGGTATTCTTCTTTTTTTTTTAAGGATACGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTg < 2:776596/147‑1 (MQ=255) gCAATGGCCTTGCCCGCCAGATAATCACGCTATTCTTGATTGATTTGTAAGCGGGTACCGACCGCCGAGATCGCAGCGGTAAGCTCGTGATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTc > 1:807915/1‑149 (MQ=255) gCAATGCCCTTGCTCGTCGTATACGCACGGTATTCTTTTTTTTTTTGTAAGGGTGCGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTc < 2:282364/149‑1 (MQ=255) aTGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATa < 1:682937/149‑1 (MQ=255) tGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGTTTTTTAAGGATGCGCCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAg < 2:950554/149‑1 (MQ=255) ggCCTTGCCCGCCAGATAATCTCGGTATTCTTTTTTTTTTTTTAAGGGTGCGGCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGc < 2:952050/149‑1 (MQ=255) ccGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGccc > 2:173718/1‑149 (MQ=255) cGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACAGACCACCGCGATCGCAGCGGTAAGCTCGCTCTTGGCGCTAAACACGCGCGCAGCGCCGCCACGGACATCGGCGTAACGTTCGCCGTTGTCATCGCTCCAGCCCt > 2:1170423/1‑149 (MQ=255) aGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTAGTTCTTAGTGTTAAACACCGGGCCAGCGACACAACGGACATCGGCGTAATCTTGGCCGTTGTCATCGCGCTAGCCCTGACg > 2:320454/1‑149 (MQ=255) aTAATCACGGTATTCTTCATTGTTTTGTAAGCGGGCACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGc < 2:649936/149‑1 (MQ=255) aTAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACCTCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGc > 2:76488/1‑149 (MQ=255) tCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAAt > 2:485355/1‑149 (MQ=255) cACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGGTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGGCATAGCTCCATCCCTTTTGGCGaagt > 1:472644/1‑147 (MQ=255) tATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACgcgc > 2:514183/1‑149 (MQ=255) tATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTGATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACgcgc < 1:1052986/149‑1 (MQ=255) tcttcATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGGCGGCGAAAACGCGCCAg > 1:174658/1‑149 (MQ=255) cttcATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGt > 1:677296/1‑149 (MQ=255) ttGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGCCACCACGGAAAATGACTTGATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttcttc > 1:291943/1‑149 (MQ=255) ttGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttcttc < 1:489801/149‑1 (MQ=255) tGATGTGTAAGCGGGTACCGCCCACCGCGATCGCAGCGGTAACCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACCACGGTCCTCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCg < 1:419095/149‑1 (MQ=255) gATTTGAAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGt < 1:568601/149‑1 (MQ=255) ttGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGaa < 2:1108931/149‑1 (MQ=255) tAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGtt > 1:1178971/1‑149 (MQ=255) aaGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCCCCGTTGTCATACCCCCAGCCCTGACGGCGAATACGCGCCAGTTCTTAGCGAAGTTg > 2:152848/1‑149 (MQ=255) gggggTGCCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCt < 2:893905/147‑1 (MQ=255) aggcgccGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCtgt < 2:694981/144‑1 (MQ=255) tACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGTGGa < 1:192773/149‑1 (MQ=255) gaCCGCCCGCCGAGAGCGGAGCGGTAAGCTCGTTCTTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGTGGa < 1:417891/148‑1 (MQ=255) aCCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGTGGAt < 1:369835/149‑1 (MQ=255) | GGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTACCGACCACCGAGATCGCAGCGGTAAGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGTGGAT > NC_000913/2361406‑2361695 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |