New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4253999NA (NA)3 (0.070) 3/262 NT NA noncoding (100/130 nt) RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
?NC_000913 = 4254029 NA (NA)noncoding (130/130 nt) RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

TTTTTAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCAT  >  NC_000913/4253852‑4254145
                                                                                                                                                   |                                                                                                                                                  
tttttAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGg                                                                                                                                                   >  2:654801‑M1/1‑148 (MQ=255)
  tttAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgcc                                                                                                                                                 >  1:627664‑M1/1‑146 (MQ=255)
   ttACGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccg                                                                                                                                                <  2:13424‑M1/149‑5 (MQ=255)
    tAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccgg                                                                                                                                               >  2:768821‑M1/1‑144 (MQ=255)
    tAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccgg                                                                                                                                               >  2:280287‑M1/1‑144 (MQ=255)
     aGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccgga                                                                                                                                              <  1:752451‑M1/149‑7 (MQ=255)
         cTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTGCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGAAACGCGGGATAAg                                                                                                                                          >  2:130185/1‑149 (MQ=255)
              aaTGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGtt                                                                                                                                     <  2:604285/149‑1 (MQ=255)
              aaTGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGtt                                                                                                                                     >  2:232492/1‑149 (MQ=255)
              aaTGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGtt                                                                                                                                     >  1:459499/1‑149 (MQ=255)
                 tggTTAGTGGCATTTCTGAGGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTc                                                                                                                                  <  2:596638/147‑1 (MQ=255)
                 gatgtACTGGCATTTCTGATGATCTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTc                                                                                                                                  <  2:491769/145‑1 (MQ=255)
                 gAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTc                                                                                                                                  <  1:543404/149‑1 (MQ=255)
                 gAGTTACTGGCAGTTCTGATGATGGAAAAAAGCCGGATGATCATCCGGCTGTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTc                                                                                                                                  <  2:297313/149‑1 (MQ=255)
                   gTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACAGATCGCAATTTATTGAATTTGCAGCTTATGGAAGGCCGGATAAGGCGTTTTcgc                                                                                                                                <  2:431577/149‑1 (MQ=255)
                        tGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGTAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCAT                                                                                                                           >  1:505679‑M2/1‑149 (MQ=255)
                            aTTTCTGATGATGTAAAAAAGACGAATGATCATCCGGATTTCTTATGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGc                                                                                                                       <  2:592335‑M2/149‑2 (MQ=255)
                            aTTTCTGATGATGAAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggatgcggcgaaaacgccttatccgg                                                                                                                       <  1:163360‑M1/149‑30 (MQ=255)
                                      atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTGTGGAAGGCCGGATAAGGCGTTTTCGCCGCATACGGCAATtctctc                                                                                                             >  1:257470/1‑149 (MQ=255)
                                       tgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTTAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTctctct                                                                                                            <  1:520574/149‑1 (MQ=255)
                                         tAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCcttccataatct                                                                                                          >  2:47418‑M2/1‑137 (MQ=255)
                                               aGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCcttccataatctgcaaat                                                                                                    >  2:649282‑M2/1‑131 (MQ=255)
                                                 ccGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGCTAAGGCGTTTTCGCCGCCTCCGGCACTTCCCTCTGATTACCCtc                                                                                                  >  2:606402/1‑148 (MQ=255)
                                                   ggATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCg                                                                                                <  1:148635/149‑1 (MQ=255)
                                                     atgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                                                                              <  2:631070/149‑1 (MQ=255)
                                                             ccGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCACTTCTCTCTGATTCCCCTTCGCCCTGCATcc                                                                                      >  1:24878/1‑148 (MQ=255)
                                                             ccGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCg                                                                                      <  2:394668/149‑1 (MQ=255)
                                                             ccGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGATTTCCCGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCCCTGATTACCCTTCGCCCTGCGTCg                                                                                      <  1:729924/149‑1 (MQ=255)
                                                              cGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTCTGCATGGTCTGATAAGGCCCAGCTCCTTCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGc                                                                                     <  1:772525/149‑1 (MQ=255)
                                                              cGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGc                                                                                     >  1:248426/1‑149 (MQ=255)
                                                              cGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGc                                                                                     <  2:229325/149‑1 (MQ=255)
                                                              cGGCTTTCTCCTGGTTTGCCTGACGCGCGGCGCTTCTCAGGCCTACACAACACAGCGCAATTTATTGAATTTGCAGATTAGGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGc                                                                                     <  2:72878/149‑1 (MQ=255)
                                                                  tttCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCActc                                                                                 >  1:726861/1‑149 (MQ=255)
                                                                             ttGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaa                                                                      <  2:671967/149‑1 (MQ=255)
                                                                              tGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaaa                                                                     >  1:106636/1‑149 (MQ=255)
                                                                              tGCCTGATGCGCGGCGCCTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaaa                                                                     <  1:232492/149‑1 (MQ=255)
                                                                               gCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAAc                                                                    >  2:305331/1‑149 (MQ=255)
                                                                                ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGACGGCCGGATACGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACg                                                                   <  1:166519/149‑1 (MQ=255)
                                                                                ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACg                                                                   >  2:447144/1‑149 (MQ=255)
                                                                                ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACg                                                                   >  2:522623/1‑149 (MQ=255)
                                                                                ccTGACGCGCGGCGCTTCTCAGGCCTACACAACACATAGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCATTCGCCCTGCGTCGCCCTCTCACTCCTCaaaac                                                                   >  2:21490/1‑147 (MQ=255)
                                                                                  tGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATCATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCCCTCTCAATCGTCAAACGCa                                                                 >  1:497561/1‑149 (MQ=255)
                                                                                   gATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCACATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCAc                                                                <  1:486101/149‑1 (MQ=255)
                                                                                     tGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGt                                                              <  1:578968/149‑1 (MQ=255)
                                                                                     tGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGt                                                              <  1:86170/149‑1 (MQ=255)
                                                                                     tGCGCGGCGCTTCGCAGGCCTACGCAACACATCGCAATTTATTGAACTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCCCTCTCAATCGTCAAACGCACGt                                                              <  2:740387/149‑1 (MQ=255)
                                                                                          ggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGGCGCATCCGGCAATTGTCTCTGATTACCCTTCGGCCTGCGTCGCAGTCTCATTCGTCGAACGCACGTCTggt                                                         >  2:259066/1‑147 (MQ=38)
                                                                                          ggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGAt                                                         >  2:310608/1‑149 (MQ=255)
                                                                                            cgcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGt                                                       <  2:307743/149‑1 (MQ=255)
                                                                                               ttCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCCAACGCACGTCTGATGTGAt                                                    >  2:177045/1‑149 (MQ=255)
                                                                                                 ctcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCa                                                  >  1:753237/1‑149 (MQ=255)
                                                                                                  tcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCaa                                                 <  1:154820/149‑1 (MQ=255)
                                                                                                  tcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCaa                                                 <  1:156585/149‑1 (MQ=255)
                                                                                                  tcAGGCCTACACAACACATCGCAAGTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCaa                                                 >  1:396239/1‑149 (MQ=255)
                                                                                                   cAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAAc                                                <  2:106636/149‑1 (MQ=255)
                                                                                                   cAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAAc                                                <  2:276904/149‑1 (MQ=255)
                                                                                                    aGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGATTTAGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCACTCGTCAAACGCCCGTCTGATGTAAGCAACt                                               >  2:512481/1‑149 (MQ=255)
                                                                                                    aGGCCTACACAACACATCGCAATTTATTGAATTGGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCAGCATCCGGCAATTCTCTCCGATTACCCTTCGCCATTGCTGGAACCCACAATCGTAAAAGACACGTCTGGTGTGATAAACt                                               >  2:333626/1‑149 (MQ=255)
                                                                                                      gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTcc                                             >  2:44148/1‑149 (MQ=255)
                                                                                                      gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTcc                                             <  1:171663/149‑1 (MQ=255)
                                                                                                        cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGTCGTATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGc                                           <  1:730486/149‑1 (MQ=255)
                                                                                                          acacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTCCCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCa                                         <  2:459499/149‑1 (MQ=255)
                                                                                                          acacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTGGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTACGCCa                                         >  1:41363/1‑149 (MQ=255)
                                                                                                            acaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGc                                       >  2:693660/1‑149 (MQ=255)
                                                                                                            acaacacaTCGAAATCTATTGAATTTGCAGACCATGGACGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAAAACTCTCTGATTACCCTTCCCCCTGCGTCGCCCTCTCAATCGTCAAACGCACCTCCGATGTAATCAACTCCGCCaac                                       >  2:142748/1‑147 (MQ=255)
                                                                                                              aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGTATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCCTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCaa                                     <  1:507949/149‑1 (MQ=255)
                                                                                                                      gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCCTCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCAGCCAGCAACTGATaaa                             >  1:430075/1‑149 (MQ=255)
                                                                                                                      gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCGCTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGTTaaa                             >  2:175281/1‑149 (MQ=255)
                                                                                                                      gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTACTCAACTCCGCCAGCCACTGTTaaa                             >  1:560090/1‑149 (MQ=255)
                                                                                                                      gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATaaa                             <  1:63643/149‑1 (MQ=255)
                                                                                                                              ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTTATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCCAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATCAACCTTCATc                     >  2:480118/1‑149 (MQ=255)
                                                                                                                                  aTTTGCAGATTATGGAAGgccggataaggcgttttcgccgcatccggccttccataatctgcaaattcaataaattgcgatgtgttgtgtaggcctgagaagcgccgcgcatcaggcaacccagaagaaagccggatgatcatccggct                 >  2:649282‑M1/1‑18 (MQ=255)
                                                                                                                                      gCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGc             >  1:223282/1‑149 (MQ=255)
                                                                                                                                      gCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCAGCCCAGAGTTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGc             >  1:188617/1‑149 (MQ=255)
                                                                                                                                        aGATTATGGAAGgccggataaggcgttttcgccgcatccggccttccataatctgcaaattcaataaattgcgatgtgttgtgtaggcctgagaagcgccgcgcatcaggcaacccagaagaaagccggatgatcatccggctttttta           >  2:47418‑M1/1‑12 (MQ=255)
                                                                                                                                         gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCgg          >  2:541083/1‑149 (MQ=255)
                                                                                                                                         gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCgg          <  2:753237/149‑1 (MQ=255)
                                                                                                                                              tGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCgg     <  1:305331/149‑1 (MQ=255)
                                                                                                                                               ggAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACGCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGc    <  2:325885/149‑1 (MQ=255)
                                                                                                                                                gacggCCGGACAAGGCGTTTTCTCCGCATCCCGCCATTCTCTCTGCTTACCTGTCGCCGTGCGTCGCACTCTCAAACGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCa   <  2:390979/146‑1 (MQ=255)
                                                                                                                                                gAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGGTTCTGCCGGTTCGGCa   >  2:727292/1‑149 (MQ=255)
                                                                                                                                                 aaGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCAt  >  1:500557/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TTTTTAGGGCTGGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCAT  >  NC_000913/4253852‑4254145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.