| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1469240 | NA (NA) | 83 (0.980) | 69/296 | 0.2 | 97.7% | intergenic (‑91/‑1) | insC1/ydbA | IS2 repressor TnpA/pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| ? | NC_000913 | = 1652258 | 2 (0.020) | pseudogene (708/1158 nt) | intQ | pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related | |||||
Only 100 of 171 total aligned reads displayed.
AGTTCGCCCTGGTGAG‑CTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAA > NC_000913/1652111‑1652405 | aGTTCGCCGTGGTGAGACTG‑GTGCCAATGGATCGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGt > 2:434285‑M2/1‑148 (MQ=255) aaccttgcagaggcgttcgagctttattacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGc < 1:1007707‑M2/7‑1 (MQ=255) ccggcagagtctttcgagcattagaacgaatggcagccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAg < 2:615189‑M2/10‑1 (MQ=255) cagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAAt > 1:1215179‑M2/136‑149 (MQ=255) tGGTGAG‑CTGTGTGCACTTGGATGGGAGGAAATAGAAAAGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggcc > 2:204577‑M2/1‑139 (MQ=255) agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAata > 2:66831‑M2/135‑148 (MQ=255) gTGAG‑CTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggcccc < 1:245710‑M2/149‑13 (MQ=255) gTGAG‑CTGTGTGCACTTGGATGGGAAGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactgaccac < 2:1056614‑M2/149‑13 (MQ=255) gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACg < 2:152914‑M2/19‑1 (MQ=255) gttcgagcattataacgaatggcacccgcatagtccacagtgacatcgcacgccacgggaataactccgccagcgggcctgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATAAAGCCAGCAATCGACGct > 2:586254‑M2/129‑149 (MQ=255) cTGTGTGCACTTCGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGAGAAGGAGAAATTTAGCAAAACACCGTTTCACGGTACCAAAAACACAGGCAGGAACCAATCGGGTCGTGCATCTTATTAAGtggactggccccctgaa < 2:517537‑M2/149‑18 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTcc > 2:934511‑M2/125‑149 (MQ=255) gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTcc > 1:934841‑M2/125‑149 (MQ=255) cattataacgaagggcatgcgcatagtgcgctgggttatcgctcgccacgggaatttctgcggcagcgggcttgtaatgggttaagtgataacagatttctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGa < 2:160948‑M2/28‑1 (MQ=255) gCACTTGGATGGGAAGACATAGAAATTAAAAATTTAACAAAGGTGCAAAAGACAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctcca > 1:1361106‑M2/1‑126 (MQ=255) ttataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggccaatccATTAAGCCAGCAATCGACGCTCTCCGGAGt > 1:866003‑M2/120‑149 (MQ=255) tataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaagtccATTAAGCCAGCAATCGACGCTCTCCGGAGTc > 2:515298‑M2/119‑149 (MQ=255) aCTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAAGTTGGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAAACAAGCGGGTGTTTCATCTTATTAATtggactggccccctggatctccaga < 1:263945‑M2/149‑26 (MQ=255) taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAg > 1:414717‑M2/117‑149 (MQ=255) acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGGGTCAGAt > 1:736898‑M2/115‑149 (MQ=255) gggAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaat < 2:1369758‑M2/149‑34 (MQ=255) atggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACa > 1:423613‑M2/111‑149 (MQ=255) ggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatca > 1:374347‑M2/1‑112 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCGCTCCGGAGTCAGATGACATTAAc > 1:966056‑M2/106‑149 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataaaagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAAc < 1:811623‑M2/44‑1 (MQ=255) tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACg > 1:65282‑M2/105‑149 (MQ=255) cgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACgag < 1:1090996‑M2/47‑1 (MQ=255) aTAGATCTGAAAAATGGAACAATGAGGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatagcactta < 2:855228‑M2/149‑42 (MQ=255) aGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaaaatcacttaaa < 2:74104‑M2/149‑44 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcccttaactaa < 2:805156‑M2/149‑47 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggcccccgaaatctccagacaaccaatatcacttcaataa < 2:423622‑M2/149‑47 (MQ=255) tgcgctgggttatcgctcgacaagggaatatctgcggcagcgggcttgtaatgggttaagtgatagcagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGc < 1:292648‑M2/54‑1 (MQ=255) tGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttacgtaagt > 2:173107‑M2/1‑101 (MQ=255) tGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 1:1187251‑M2/149‑49 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctgggaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCaaa > 1:899285‑M2/93‑149 (MQ=255) gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAagag < 1:556727‑M2/60‑1 (MQ=255) tGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctaaatctccagacaaccaatatcacttaaataagtgataggc < 1:415960‑M2/149‑56 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGc > 2:732949‑M2/89‑149 (MQ=255) cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatttaggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGGCAGATGAAATTAACGAGACTGAGCACAGAGAATATCa > 1:1335493‑M2/83‑149 (MQ=255) cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGCGCAAAGAGCCTATCa > 1:1335546‑M2/83‑149 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCAt > 1:355859‑M2/82‑149 (MQ=255) tgatgaTCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact < 1:541166‑M2/149‑64 (MQ=255) tgatgaTCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact < 2:848899‑M2/149‑64 (MQ=255) ccggccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCAtt < 2:974864‑M2/69‑1 (MQ=255) tggccacgggaatagctgcggcagcgggcttgtaatgggttaagtgataacagaggtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTg < 2:107688‑M2/70‑1 (MQ=255) atgatCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag > 2:1231567‑M2/1‑84 (MQ=255) tgatCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt > 2:49863‑M2/1‑83 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacaggtgtctggaaatatagggggaaatccATTAAGCCAGCAATCGACGCGCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCACATCATTGAtgg > 1:439305‑M2/76‑148 (MQ=255) aGGATAAATTTAGCAAACTACCGTTTCACCTTACCAAAAACACAGACGGGAACCAATCGGTTCATTCAGCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaagtaagtgatagtcttaatactagttttta > 2:624679‑M2/1‑78 (MQ=255) aGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta > 2:243282‑M2/1‑78 (MQ=255) gagaAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 2:917335‑M2/149‑74 (MQ=255) gagaAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga < 1:1070937‑M2/149‑74 (MQ=255) agaAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac > 2:201387‑M2/1‑75 (MQ=255) aatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACtt < 1:818533‑M2/80‑1 (MQ=255) aTTTAGCAAATGACCGTTTCACGGTACCAAAAACACAGGCGGGCACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt > 2:348353‑M2/1‑71 (MQ=255) tttAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcataatactagcttttagactagtc < 2:877794‑M2/149‑80 (MQ=255) ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCagag > 1:1194136‑M2/65‑149 (MQ=255) gCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg > 2:1088096‑M2/1‑66 (MQ=255) cAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttagactagtcattgga < 1:430285‑M2/149‑85 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGTCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATgg < 2:1013924‑M2/92‑1 (MQ=255) agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATgg < 2:183350‑M2/92‑1 (MQ=255) agcgggcttgtaatggggtaagtgataacagatgtctggaaagataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATAACATTGATGTTCACTTCCGAGAGTATgg > 2:1276648‑M2/58‑149 (MQ=255) cgggcttgtaatgggttaagtgataacagaggtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGca < 1:474323‑M2/94‑1 (MQ=255) gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGcag > 1:892513‑M2/55‑149 (MQ=255) gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAGTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTAtggcacac > 1:113355‑M2/53‑146 (MQ=255) ttgtaatgggttaagggataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCGCGCGGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGcagaaca > 2:1046826‑M2/51‑149 (MQ=255) tCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCATATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtccttggagaacagatgat < 2:393301‑M2/149‑97 (MQ=255) cACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactcgtcattggagaacagaggctt < 1:628230‑M2/149‑98 (MQ=255) cACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt > 1:215110‑M2/1‑52 (MQ=255) tgggttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGaaaaa < 2:1114341‑M2/105‑1 (MQ=255) gcaccAAAAACACAGGCTGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactcgtttttagactagtcattggagaacagatgattgatg > 1:913107‑M2/3‑48 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACaa < 1:1300923‑M2/108‑1 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGATCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGAAGAACAGAAAAACaa > 2:990124‑M2/42‑149 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatcgATTAAGCCAGCAAACGATGCACTCCGGAGACAGATGACATTAACGAGACTGAGCAAAGAGCGTATAATTGATGTTCACTTAAGAGAGCATGGCAGCACAGAAAAACgaa > 2:293761‑M2/41‑149 (MQ=255) ttaagtgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGATGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACaaa > 2:956635‑M2/41‑149 (MQ=255) aaaaaCACAGGCGGGAACCAACCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaagactagtttttagactagtcattggagaacagatgattgatgtctta > 1:961641‑M2/1‑43 (MQ=255) aaaaCACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataggcttaatactagtttttagactagtcattggagaacagatgattgatgtcttag < 1:209352‑M2/149‑108 (MQ=255) tgataacagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTGCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGGACAGAAAAACGAAAATGc > 2:917812‑M2/36‑149 (MQ=255) cgcaggCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggcc > 2:466417‑M2/3‑38 (MQ=255) acaGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg < 2:1035563‑M2/149‑113 (MQ=255) acagatgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCtt > 1:639709‑M2/31‑149 (MQ=255) aGGCGGGAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactcgtccttgtagaacagatgattgatgtcttagggccgga > 1:1380504‑M2/1‑35 (MQ=255) atgtctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAAAAAAAAAAAACAAAAATGCACCTTTGtt < 2:1064870‑M2/123‑1 (MQ=255) atgtctggaaatatagggacaaatccATTAAGCCAGCAATCGACGCACTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGGATGGCAGAACAGAAGAACACCAATGCAACGTTgtg > 1:106373‑M2/27‑148 (MQ=255) ggAACCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaac < 1:348786‑M2/149‑120 (MQ=255) ggAACCAATCGGGTCATTCATCTTATTAAGgagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaac > 1:399989‑M2/1‑30 (MQ=255) ctggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTc < 1:732949‑M2/127‑1 (MQ=255) aCCAATCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgca > 2:603591‑M2/1‑27 (MQ=255) ggaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAAACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCaa > 2:127020‑M2/21‑149 (MQ=255) gaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAAc > 2:968355‑M2/20‑149 (MQ=255) gaaatataggggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAAc > 2:396068‑M2/20‑149 (MQ=255) aaTCGGGTCATTCATCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaaattactttttggtgtactggtgattgatgtcttagggccggagaaacgcagac < 1:457180‑M2/149‑126 (MQ=255) tCGGGTCATTCATCTTGTTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacgg < 1:874351‑M2/149‑128 (MQ=255) aggggcaaatccATTAGGCCAGCAATCGACGCGCTCCGTAGTCAGATGACATTAACGAGACTGAACAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAgt < 2:1358388‑M2/137‑1 (MQ=255) gggcaaatccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAgtgt > 1:1382792‑M2/11‑149 (MQ=255) attcatCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggggaaacgcagacggcgtacca < 1:889564‑M2/149‑135 (MQ=255) catCTTATTAAGtagactggccccctgaatctccagacaaccaat > 1:722222‑M2/1‑12 (MQ=255) atCTTACTAAGtagactggccccctgaatctccacacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacaca > 2:828888‑M2/1‑11 (MQ=255) tCTTATTAAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactaggttttagactagtcattggcgatcgagagattgatgtcttcggcacggaggaacgcagacggcgtaccacacag < 1:1010865‑M2/149‑140 (MQ=255) ccATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCgaga < 2:1194136‑M2/147‑1 (MQ=255) | AGTTCGCCCTGGTGAG‑CTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAA > NC_000913/1652111‑1652405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |