New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4542691101 (0.820)16 (0.140) 16/278 11.0 14.1% intergenic (+57/‑425) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
?NC_000913 = 4542987 100 (0.860)intergenic (+353/‑129) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 102 total aligned reads displayed.

CGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAGCTAACG  >  NC_000913/4542545‑4542837
                                                                                                                                                  |                                                                                                                                                   
cGTTATACCGCCAGTAATGCTGCTCGTTTTGACGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                                   <  2:1641383/149‑1 (MQ=255)
cGTAATACCGCAAGTAATGCTACGCGTTTAGCCACATTATGTGAAAGAAATAATCTCATAAACGAAAAAATAAAAACAGAACAACTTTTATCCAACTTATTGACAAAAAAATAAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                                   <  2:1899185/149‑1 (MQ=255)
agTTATACCGATTGTAATGTTGCTCGTGGGGCCGGATTATGGGGAGGGGATAATCGCTTAAACGAAAGATTTGAACGAGAAGATGTTTGATTTATTTTTTTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                                   <  2:68936/148‑1 (MQ=255)
 gTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCattt                                                                                                                                                  <  1:182725/149‑4 (MQ=255)
  ttATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTAGGGCCAAACt                                                                                                                                                 >  2:457401/1‑149 (MQ=255)
    ataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGt                                                                                                                                               <  2:1420600/149‑1 (MQ=255)
     taCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGTAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAAGAAATACAAGACAATTGGGGCCAAACTGTc                                                                                                                                              >  2:1505102/1‑149 (MQ=255)
     taCCGCCAGTAATGCCGCTCGGTTTGCCGCATTATGGTAAATAAATAATCTCATAAAGGAAAAATTAAAAAGGGAAGAGGTATGATTTAACTTATTGAGAATAAATTTAAAAAAACTAATAAATACAAGACAATTGGGGCCAAACTGTc                                                                                                                                              <  2:592450/149‑1 (MQ=255)
      gccGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAGAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTcc                                                                                                                                             <  2:476110/148‑1 (MQ=255)
      aCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACACATAAATACAAGACAATTGGGGCCAAACTGTcc                                                                                                                                             <  2:2019534/149‑1 (MQ=255)
        cGCCAGGAATGCTTGTCGGTTGGCCGAATTATGAGAAAAAAATGATCTAAATAACGTTAGATGAATAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGTCATTTGGGGCCAAACTGTCCat                                                                                                                                           <  2:1391131/149‑1 (MQ=255)
         gCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCgta                                                                                                                                          >  2:1564532/1‑149 (MQ=255)
             gTAATGCTGCTCGTTTTGCCGTATTATGGGAAAGAAATAATCTAATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                      <  2:285139/149‑1 (MQ=255)
             gTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                      >  2:694695/1‑149 (MQ=255)
             gTAATGCAGATCGTATTGCCGAATTAAGGGAAAGAAATAATCTCATAAAAAAAAAAAAAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                      <  2:238133/149‑1 (MQ=255)
                 tgctgcTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaat                                                                                                                                  >  2:625368/1‑149 (MQ=255)
                   ctgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaataa                                                                                                                                >  2:1877040/1‑149 (MQ=255)
                     gctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGt                                                                                                                              <  2:1809472/149‑1 (MQ=255)
                      ctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGt‑t                                                                                                                            <  1:321827/149‑1 (MQ=255)
                       tCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑Ta                                                                                                                           <  2:266127/149‑1 (MQ=255)
                                  gATTATGAGAAAGAAATAATCTCATACACGAAATATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAGATAAGT‑TACGTATTTTTtc                                                                                                                <  1:1484933/149‑1 (MQ=255)
                                     tATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCa                                                                                                             >  2:1535274/1‑149 (MQ=255)
                                      atcggAAATAAATAATCTCATAAACGAAACATTAAAAATAGTAGAGGTTTGATTTAACTGATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACTATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCaa                                                                                                            <  2:113795/146‑1 (MQ=255)
                                      aTGTGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGTCAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCaa                                                                                                            <  2:501818/149‑1 (MQ=255)
                                       tGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTAGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAg                                                                                                           >  1:471267/1‑149 (MQ=255)
                                       tGGGAAAGAAATAATCTCATAAACGAAAAAGTAAAACGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAg                                                                                                           >  2:1548401/1‑149 (MQ=255)
                                          gaaagaaaTAATCTCATAAACGAAAAATTAAAATGAGAAAAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAAAACAAGACGATTGAGGCCAAACTGTCCATATCATAAAAAAGA‑TACGTATTTTTTCTCAAGCAt                                                                                                        >  2:987556/1‑149 (MQ=255)
                                          gaaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCAt                                                                                                        >  2:175589/1‑149 (MQ=255)
                                           aaagaaaTAATCTCATAAACGAAAAATTCAAAAGAGAAGAGGGTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATa                                                                                                       >  2:1200732/1‑149 (MQ=255)
                                                aataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAat                                                                                                  >  1:829206/1‑149 (MQ=255)
                                                       tcATAAACGAAAAAGTACAAAGAGAAGATGTGGGATTTAACTTATGGATAATAAAGTTAAAAAAACAAATAAATACTAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaa                                                                                           <  2:358316/149‑1 (MQ=255)
                                                        cATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaa                                                                                          >  1:1666882/1‑149 (MQ=255)
                                                         atgaaCAAAAAATTAAAAAGAGAAGGGGTTTGAGTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa                                                                                         <  2:194887/146‑1 (MQ=255)
                                                         aTAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa                                                                                         >  1:1445804/1‑149 (MQ=255)
                                                         aTAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa                                                                                         >  1:1447874/1‑149 (MQ=255)
                                                          tAAGCGAAGAATTAAAAAAAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACTAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAc                                                                                        <  2:290006/149‑1 (MQ=255)
                                                          tAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAc                                                                                        <  1:74728/149‑1 (MQ=255)
                                                           aaaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACg                                                                                       >  2:1982113/1‑149 (MQ=255)
                                                           aaaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACg                                                                                       <  1:810427/149‑1 (MQ=255)
                                                            agcgtaaaaTTAAACAGAGAAGAGGTTTGATTTAACTTATTAATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATACAAAAATTAAAAAACGa                                                                                      >  2:869520/6‑149 (MQ=255)
                                                               gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                                   >  1:2007286/1‑149 (MQ=255)
                                                               gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                                   >  2:270263/1‑149 (MQ=255)
                                                               gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                                   >  2:1484872/1‑149 (MQ=255)
                                                                aaaaaTTAAAAAGAGAAGAGGTTTGATTTAATCTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaa                                                                                  <  1:221712/149‑1 (MQ=255)
                                                                aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaa                                                                                  >  2:504491/1‑149 (MQ=255)
                                                                 aaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaaa                                                                                 <  1:1863521/149‑1 (MQ=255)
                                                                       aaaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATc                                                                           <  1:1198934/149‑1 (MQ=255)
                                                                        aaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCt                                                                          >  2:921521/1‑149 (MQ=255)
                                                                                agagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGttt                                                                  <  1:1548401/149‑1 (MQ=255)
                                                                                agagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGttt                                                                  <  1:1188620/149‑1 (MQ=255)
                                                                                 gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTg                                                                 >  1:586814/1‑149 (MQ=255)
                                                                                  agGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGa                                                                >  1:168072/1‑149 (MQ=255)
                                                                                  agGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCACCTAACTGTTTGa                                                                <  1:1474440/149‑1 (MQ=255)
                                                                                   ggTTTCATTTAAGTTAATAAAAATAAAGATAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCCT‑CCAAATTTAACTGTAGAAATCTTTTCTACTACATAAAAATATAAAAAAAAGAAAAAAAGCATCTAACTGTTTGat                                                               <  2:942181/149‑1 (MQ=255)
                                                                                    gTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGata                                                              >  2:159273/1‑149 (MQ=255)
                                                                                     tttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTTTTTTTTTTACAAATATTAAAAAACGACAAAAATCATCTCACTGTTTGatat                                                             >  2:1119819/1‑149 (MQ=255)
                                                                                     tttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGatat                                                             <  2:1933063/149‑1 (MQ=255)
                                                                                        gATTTAACTTATTGATAATAAAGTTAAAAAATCAAATAAATACCAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGCATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTa                                                          <  1:1372537/149‑1 (MQ=255)
                                                                                         aTTTAACATATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTaa                                                         <  1:1781520/149‑1 (MQ=255)
                                                                                            tAACTTATTGATAATAAAGTAAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAatt                                                      <  1:1592701/149‑1 (MQ=255)
                                                                                                ttATTGATAATAAAGTTAAAAATACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACTTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                                  <  1:76037/149‑1 (MQ=255)
                                                                                                ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                                  >  1:187102/1‑149 (MQ=255)
                                                                                                ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAATAATCAAGCAGCTAACTGTTTGATATGTAAATTAttt                                                  <  1:1002000/149‑1 (MQ=255)
                                                                                                ttATTGAAAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                                  <  1:987556/149‑1 (MQ=255)
                                                                                                ataataataataAAGTTAAAAAAACAAATAAATACAAGAAAATGGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                                  <  2:152448/143‑1 (MQ=255)
                                                                                                    tGAAAATAAAGTTAAAAAAACAAATAAATACAAGACAAGTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTAt                                              <  2:550244/149‑1 (MQ=255)
                                                                                                      ataataAAGTTAAAAAAACAAATGAGTACAAGACAATTGGGACCAAACTAGCCATATAATAAATAAGT‑TAAGTATTTTTTCTCAAGCATAAAAATATTCAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTg                                            >  2:699965/1‑149 (MQ=255)
                                                                                                        aataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTa                                          <  1:160689/149‑1 (MQ=255)
                                                                                                         ataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTaa                                         <  1:1237096/149‑1 (MQ=255)
                                                                                                          taaAGTTAAAAAAACAAATAAATTCAAGACAATGGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAACACGACAAAAAGCATCTTACCGTTTGATATGGAAATTATTTTTATTGTaaa                                        <  2:402389/149‑1 (MQ=255)
                                                                                                          taaAGTTAAAAAAACAAATAAATACAAGCGAATCGGGGCCAAACTGTCCATATCATAAATACGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAATCGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTaaa                                        <  2:1299743/149‑1 (MQ=255)
                                                                                                           aaaaatAAAAAAACAAATAAATACAATACAATGGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaat                                       <  2:1429684/144‑1 (MQ=255)
                                                                                                            aaGTTAAAAAAACAAATAAATACAATACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaatt                                      <  1:931327/149‑1 (MQ=255)
                                                                                                            aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCTTTCTTTTAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaatt                                      >  2:1824479/1‑149 (MQ=255)
                                                                                                             aGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaatta                                     <  1:1465485/149‑1 (MQ=255)
                                                                                                               ttAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCAATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATTAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATGGTaaaattat                                   >  1:1861010/1‑144 (MQ=255)
                                                                                                                 aaaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATCTCATAAATAAGT‑AACGTATTTTTTTTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAAttt                                 <  2:1254801/149‑1 (MQ=255)
                                                                                                                 aaaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAAttt                                 <  1:1535274/149‑1 (MQ=255)
                                                                                                                    aaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcac                              <  1:175589/149‑1 (MQ=255)
                                                                                                                    aaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCAAAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcac                              <  1:159273/149‑1 (MQ=255)
                                                                                                                     aaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCCTATCATCAATCACT‑TACGTATTTTTTCCCAAGCATAAAAATATTAAAAAACGCCAAAAAGCATCTAACTGCTTGATATGTAAATTATTTCTATTGTAAATTAATTTcaca                             <  1:457401/149‑1 (MQ=255)
                                                                                                                     aaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAACTTAATTTcgcc                             >  1:838521/1‑146 (MQ=255)
                                                                                                                     aaaCAAATAAATACAAGAAAATTGGGGCCAAACTGTCCATAGCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcaca                             <  2:1064507/149‑1 (MQ=255)
                                                                                                                              aataCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTTTTTCTTAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCg                    >  2:343560/1‑149 (MQ=255)
                                                                                                                                taCAAGACAGTTGGGGCCAAACCGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAGAAAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCt                  <  2:1070455/149‑1 (MQ=255)
                                                                                                                                 atgaaaCATTTGGGGCCAAACTGTTCATATCATATATCAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACAGCACCTCCGCta                 <  2:1060739/144‑1 (MQ=255)
                                                                                                                                 aCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTCTTGTAAATTAATTTCACATCACCTCCGCta                 >  2:345532/1‑149 (MQ=255)
                                                                                                                                 aCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCta                 <  1:1574006/149‑1 (MQ=255)
                                                                                                                                   aaGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCtata               >  1:955953/1‑149 (MQ=255)
                                                                                                                                    aaacatttGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTatat              >  1:290728/7‑149 (MQ=255)
                                                                                                                                    aGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTatat              <  1:150709/149‑1 (MQ=255)
                                                                                                                                    aGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTatat              <  1:694695/149‑1 (MQ=255)
                                                                                                                                     gACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCCCCGCTATATg             >  2:763665/1‑149 (MQ=255)
                                                                                                                                      aCATTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGt            >  1:1861812/1‑149 (MQ=255)
                                                                                                                                        aaTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAATCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTaa          >  2:1638526/1‑149 (MQ=255)
                                                                                                                                        aaTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTaa          >  2:1638107/1‑149 (MQ=255)
                                                                                                                                         aTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTGTATGTaaa         >  1:507365/1‑149 (MQ=255)
                                                                                                                                          ttGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg        <  1:1982113/149‑1 (MQ=255)
                                                                                                                                           tGGGGCCAAGCTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAGc       <  1:1960696/149‑1 (MQ=255)
                                                                                                                                                ccAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGATTGATATGTAAATTATTTCTATTGTAAATTAATCTCACATCACCTCCGCTAAATGTAAAGCTAACg  >  2:986562/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAGCTAACG  >  NC_000913/4542545‑4542837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.