Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,361,5460TC21.1% 260.9 / 10.7 124T222A (ACC→GCC) rhmRputative DNA‑binding transcriptional regulator for the rhm operon
Reads supporting (aligned to +/- strand):  ref base T (57/40);  new base C (0/26);  total (57/67)
Fisher's exact test for biased strand distribution p-value = 7.42e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 125 total aligned reads displayed.

TTTTGGTAGGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGT  >  NC_000913/2361398‑2361691
                                                                                                                                                    |                                                                                                                                                     
ttttGGTAGGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGt                                                                                                                                                       >  1:1647806/1‑149 (MQ=255)
 tttGGTAGGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTa                                                                                                                                                      <  2:1258201/149‑1 (MQ=255)
     gTAGGGTCATTGTGTTCTCCATTGTTATGAGGTTTGTAGGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGa                                                                                                                                                <  1:143677/149‑1 (MQ=255)
      tAGGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCTCGGTATGCTGCATTGATTTGTAAGCGGGTAC‑‑CGac                                                                                                                                               <  1:1003316/149‑1 (MQ=255)
         ggTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGcccac                                                                                                                                            >  1:80486/1‑149 (MQ=255)
         ggTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGaccac                                                                                                                                            <  1:304259/149‑1 (MQ=255)
          gTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGaccacc                                                                                                                                           >  1:2032481/1‑149 (MQ=255)
            cATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCga                                                                                                                                         >  1:1968714/1‑149 (MQ=255)
             atgatgTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCgag                                                                                                                                        >  2:1318590/1‑149 (MQ=255)
                  gTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCCACAGACGTGAAATATCCCTGGCGCAGGCCATGGCCTTGCCCGCCAGATAATCAGGGTATTCTTCATTGTTTTGTAAGGGGGTAC‑‑CGACCACCGAGGT‑CGc                                                                                                                                  >  2:404736/1‑149 (MQ=255)
                  gTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGTAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGATACGG‑‑CGACCACCGAGAT‑CGc                                                                                                                                  <  2:1115576/149‑1 (MQ=255)
                    tctcCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAACCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAC‑CGcga                                                                                                                                >  2:125922/1‑147 (MQ=255)
                     ctcCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCGTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGc                                                                                                                               <  1:1238043/149‑1 (MQ=255)
                      tcCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGGCCACCGAGAT‑CGCAGCg                                                                                                                              >  1:8172/1‑149 (MQ=255)
                        cATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCCCCGAGAA‑CGCAGCGGt                                                                                                                            >  1:1343290/1‑149 (MQ=255)
                           tGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAAGGGGGCGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑Ag                                                                                                                        <  2:164145/149‑1 (MQ=255)
                               aTGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTTCCCGCCAGATAATCACGGTATTCGTCATTGATTTGTACGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGAGGTA‑AGCCCg                                                                                                                    >  2:55641/1‑149 (MQ=255)
                               aTGAGGCTTGTAAGTCAAAGGGACTTTTCCATACCTACAGACGTGAAATATCCCTGGCGCTGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCg                                                                                                                    >  2:1452422/1‑149 (MQ=255)
                                 gAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGtt                                                                                                                  >  1:1495159/1‑149 (MQ=255)
                                    gctttgaaGTCAAAGGGCTGTTTCCATCCTAACAGACGTGAAATATCCCTGGCACAGGCAATGGCCTTGCCCGCCAGATAACCACGGTACTCTTCATTTTTTTTTAATGATACGG‑‑CGACCACCGAGAT‑CGCTGCGGTA‑AGCTCGTTAtt                                                                                                               <  2:1509433/143‑1 (MQ=255)
                                    gCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTAtt                                                                                                               <  1:1757193/149‑1 (MQ=255)
                                        gTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCg                                                                                                           >  1:360495/1‑149 (MQ=255)
                                         tAAGTCAAAGGGACTTTTCCATCCCAACAGCCGTGAAATATCCCTGGCGCCCGGAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGt                                                                                                          <  1:573326/149‑1 (MQ=255)
                                           aGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGCCCACCGAGAT‑CGTAGGGGTA‑AGCTCGTTATTGGCGTTa                                                                                                        >  1:929252/1‑149 (MQ=255)
                                           aGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTa                                                                                                        <  1:1296920/149‑1 (MQ=255)
                                             tCAAAGTGACTTTTCCATCTCAGCAGACGTGGAATATCCCTGGCGCAGGCAATGTCCTTGCTCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGGTGCGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTaaa                                                                                                      <  2:1848277/149‑1 (MQ=255)
                                             tCAAAGGGACTTTGCCATCCCAACAGACGTGAAATATCCCTCGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTaaa                                                                                                      >  1:1466601/1‑149 (MQ=255)
                                                aaGGGTCTTTTCCATCCCCACAGACGGGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTTTTTTTAATGATACGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAacac                                                                                                   <  2:648269/149‑1 (MQ=255)
                                                aaGGGACTTTTCCATCCCAACAGCCGTGAAATATCCCCGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAacac                                                                                                   <  1:578191/149‑1 (MQ=255)
                                                    gACCTTTCCATCCCCACAAACGTGAAATATCCCTGGCGCACGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGgc                                                                                               <  1:685480/149‑1 (MQ=255)
                                                       ttttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCa                                                                                            >  2:1140158/1‑149 (MQ=255)
                                                       ttttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCa                                                                                            >  2:2001917/1‑149 (MQ=255)
                                                         ttCCATCCCAACAGACGTGAAATATCCCTGGCGCCGGCAATGGCCTTGCCCGCCAGATAGTCACGATATTCTTCATTGATTTGTAAGCGCGTAC‑‑CGACCACCGAAAT‑CCCCGCGGTAGAGC‑CGTTTTGTGCGCTGAACACCGGCGCAGc                                                                                          >  2:577434/1‑149 (MQ=255)
                                                         ttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGTTTTGTAAGGGGGCAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGc                                                                                          <  2:965902/149‑1 (MQ=255)
                                                         ttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGc                                                                                          <  1:1257485/149‑1 (MQ=255)
                                                         ttCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGAACGCCATTTAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGc                                                                                          >  1:1921737/1‑149 (MQ=255)
                                                           ccATCCCAACAGTCGTGAATTTTCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTTTTTTTTAATGAGGCGC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGa                                                                                        <  2:1383464/149‑1 (MQ=255)
                                                           ccATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGGGGGCAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGa                                                                                        <  2:1346548/149‑1 (MQ=255)
                                                            cATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGTCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGac                                                                                       <  1:565233/149‑1 (MQ=255)
                                                            cATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGac                                                                                       >  2:1759972/1‑149 (MQ=255)
                                                              tCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGacac                                                                                     >  1:424755/1‑149 (MQ=255)
                                                              tCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGacac                                                                                     >  1:614322/1‑149 (MQ=255)
                                                                ccAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACaa                                                                                   >  1:55385/1‑149 (MQ=255)
                                                                 cAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGATAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAAc                                                                                  <  1:1920217/149‑1 (MQ=255)
                                                                  accAGACGTTAAGTATCCCTGGCGCGGGCAAGGGCCTCGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACg                                                                                 <  1:195953/147‑1 (MQ=255)
                                                                  aaCAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCACGCCAGTTAATCAGGGTATTTTTCATTTTTTTTTAAGCATGTGC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACg                                                                                 <  2:772565/149‑1 (MQ=255)
                                                                         gTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCg                                                                          <  1:450308/149‑1 (MQ=255)
                                                                          tGAAATATCCCTGGCGCAGGCGATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCgg                                                                         >  1:1449373/1‑149 (MQ=255)
                                                                          tGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCCCATCGACACCACGGACATCgg                                                                         >  1:154904/1‑149 (MQ=255)
                                                                           gAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAAGCACGGTATTCTTAACTGACTTGCAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGc                                                                        >  1:1813657/1‑149 (MQ=255)
                                                                            aaaTATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGGCACCCAACGGCGATCgggg                                                                       >  2:1896923/1‑147 (MQ=255)
                                                                             aaTATCCCTGGCCCAGGCAATGGCCTTGCCCGCCAGATAATCCCGGTATTCTTCTTTTTTTTTTAAGGATGCGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGt                                                                      <  2:972287/149‑1 (MQ=255)
                                                                              atatCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTa                                                                     >  1:676279/1‑149 (MQ=255)
                                                                                atCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTGAt                                                                   >  1:585014/1‑149 (MQ=255)
                                                                                   ccTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCtt                                                                >  1:738047/1‑149 (MQ=255)
                                                                                    cTGGCGGAGGCAATGGTCTTGCCCGCCAGATAATCACGGTATTCTTCTTTTATTTCTAATCGGGCGC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTc                                                               <  2:1197233/149‑1 (MQ=255)
                                                                                     tGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCg                                                              >  1:86842/1‑149 (MQ=255)
                                                                                      ggCTCAGTCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTGTTTTTTAATGATACGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGc                                                             <  2:1309363/149‑1 (MQ=255)
                                                                                      ggCTCAGGCCATGGCCTTGCCCGCCAGATACTCACGGTATTCTTCTTTTTTTTGTAATGATGCGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGc                                                             <  2:782745/149‑1 (MQ=255)
                                                                                      ggCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGc                                                             <  1:1261504/149‑1 (MQ=255)
                                                                                          cAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCTTTGTTTTTTAAGCGGGTGC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGTCACAACGGACATCGGCGTAATCTTCGCCGtt                                                         <  2:1495159/149‑1 (MQ=255)
                                                                                          cAGGCAATGGCCTTGCCCGCCAGATAATAACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGtt                                                         >  1:1527135/1‑149 (MQ=255)
                                                                                           aGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTTTTTTTTAA‑‑TGGTACGGCGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTg                                                        <  2:700607/149‑1 (MQ=255)
                                                                                           aGGCAATGGCCTTCCCCGCCAGATAATCACGGTATTCTTCTTTGTTTTTTAAGGGTGCAG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTg                                                        <  2:1906350/149‑1 (MQ=255)
                                                                                             gCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCCGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTc                                                      >  2:1853158/1‑149 (MQ=255)
                                                                                              cAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCa                                                     <  1:1452422/149‑1 (MQ=255)
                                                                                                 tGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTGAACACCGGCGCAGCGACACAACGGACATCGGCGGAATCTTCGACGTTGTCATAg                                                  >  1:1598613/1‑149 (MQ=255)
                                                                                                   gCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCt                                                >  1:987935/1‑149 (MQ=255)
                                                                                                   gCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGA‑CACCCGGATGCGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCt                                                <  1:2001917/149‑1 (MQ=255)
                                                                                                    gcTTGCCCGCCAGATAATCACGGGATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTCTTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTc                                               <  1:1893790/148‑1 (MQ=255)
                                                                                                    ccTTGCCCGCCAGATAATCACGGTATTCTTCTTTGTTTTGTAAGGGTACAG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTc                                               <  2:1968714/149‑1 (MQ=255)
                                                                                                    ccTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTc                                               >  1:2035922/1‑149 (MQ=255)
                                                                                                      ttGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCGCCGAGAT‑AGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGGTGTCATAGCTCCa                                             >  1:1156911/1‑149 (MQ=255)
                                                                                                        gCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCAGCGTAATCTTCGCCGTTGTCATAGCTCCAGc                                           <  1:1140158/149‑1 (MQ=255)
                                                                                                         cccGGCAGATATTCACAGTTTTCTTCTTTTTTTTTTAAGGGTACGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGcc                                          <  2:901804/149‑1 (MQ=255)
                                                                                                         cccGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCTGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGcc                                          <  1:911785/149‑1 (MQ=255)
                                                                                                           cGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCt                                        <  1:18390/149‑1 (MQ=255)
                                                                                                              ctgATAATCACGGTATTCTTCTGTGTTTTGTAAGCGGGTGC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGAc                                     <  2:1343290/147‑1 (MQ=255)
                                                                                                              cAGATATTCACGGTATTCTTCTTTGTTTTGTAAGCAGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGAc                                     <  2:606727/149‑1 (MQ=255)
                                                                                                              cAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGAc                                     <  1:1179682/149‑1 (MQ=255)
                                                                                                               aGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGCAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACg                                    <  2:360495/149‑1 (MQ=255)
                                                                                                                agtcactaCGGTAGTCTTCATTGTTTTTTAATGGTGCGG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACgg                                   <  2:1862312/142‑1 (MQ=255)
                                                                                                                 aTAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGc                                  <  1:923648/149‑1 (MQ=255)
                                                                                                                   aaTCACGGTATTCTTCATTTTTTTGTAAGGGGGCAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGa                                <  2:55385/149‑1 (MQ=255)
                                                                                                                     tCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAAt                              >  1:1600192/1‑149 (MQ=255)
                                                                                                                       aCGGTATTCTTCATCGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑CGCTCGTCATTGGCGCTAAACACCGGCGCCGCGGCACAACGCGCACCGGCGCACTCCTAGCCGTTCACACAGCTTCAGCCCTGACGGccaccac                            >  2:815524/1‑143 (MQ=255)
                                                                                                                        cGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGGCATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATAcg                           >  1:1638612/1‑149 (MQ=255)
                                                                                                                              ttgtcgttGTTTTTTAAGCGGGCAG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAg                     <  2:508010/143‑1 (MQ=255)
                                                                                                                                ttcATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCAGAGCAGCGACACAACGGCCATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCGCCGACGGCGGATACGCGCCCGtt                   >  2:1019981/1‑149 (MQ=255)
                                                                                                                                  cATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttct                 >  1:594252/1‑149 (MQ=255)
                                                                                                                                  cATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttct                 >  1:594334/1‑149 (MQ=255)
                                                                                                                                    tttctttGTAAGCGGGCAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttcttc               <  2:1171518/145‑1 (MQ=255)
                                                                                                                                    ttGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGGAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttcttc               >  1:1182452/1‑149 (MQ=255)
                                                                                                                                    ttGATTTGTAAGCGGGCAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGttcttc               <  2:333617/149‑1 (MQ=255)
                                                                                                                                      gATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGt             >  1:1392430/1‑149 (MQ=255)
                                                                                                                                         ttGTAAGCGGGTAG‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTCCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGaa          <  1:583232/149‑1 (MQ=255)
                                                                                                                                              aGCGGGGAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACACCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGc     <  1:484450/149‑1 (MQ=255)
                                                                                                                                               gCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGAAATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTggt    >  1:1055880/1‑147 (MQ=255)
                                                                                                                                                 gggTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCATCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGTGAATACGCGCCAGTTCTTCGTGAAGTTGCtgt  <  2:1466601/149‑1 (MQ=255)
                                                                                                                                                 gggTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCtgt  <  1:1225865/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TTTTGGTAGGGTCATGATGTTCTCCATTGTTATGAGGCTTGTAAGTCAAAGGGACTTTTCCATCCCAACAGACGTGAAATATCCCTGGCGCAGGCAATGGCCTTGCCCGCCAGATAATCACGGTATTCTTCATTGATTTGTAAGCGGGTAC‑‑CGACCACCGAGAT‑CGCAGCGGTA‑AGCTCGTTATTGGCGTTAAACACCGGCGCAGCGACACAACGGACATCGGCGTAATCTTCGCCGTTGTCATAGCTCCAGCCCTGACGGCGAATACGCGCCAGTTCTTCGTGAAGTTGCTGT  >  NC_000913/2361398‑2361691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑