| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,366,973 | C→T | 8.0% | S17L (TCA→TTA) | yhcF → | putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,366,973 | 0 | C | T | 8.0% | 245.1 / 2.3 | 91 | S17L (TCA→TTA) | yhcF | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (37/44); new base T (6/2); total (45/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTG > NC_000913/3366828‑3367119 | ccTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAgc > 1:455774/1‑149 (MQ=255) cacaCTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCa > 1:734028/1‑149 (MQ=255) acacTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGGTTGCCGGGAGTGCCTTTTTTGCCATGTCAGCGCaa > 2:411991/1‑149 (MQ=255) acacTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCaa < 1:604800/149‑1 (MQ=255) acacTGACAATGGCGCCAGCTGTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCaa < 2:70811/149‑1 (MQ=255) acTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTGAGCGCGAGc > 1:172648/1‑149 (MQ=255) acTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGc < 1:39208/149‑1 (MQ=255) gcgcgaGCTTTTAAGGATGACGGGGAACTAACCGCCATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCGTTTTTGCCATGTCAGCGCAAGCCGCTGATaga < 1:225645/144‑1 (MQ=255) gCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGGCGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGACaga > 2:584891/1‑149 (MQ=255) ccAGCTTTTGAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCGGGAAGTGCCTTTTTTGGCATGTCAGCGCGAGCCGCTGATAGAG‑Ta > 2:692253/1‑149 (MQ=255) ccAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGGAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑Ta > 2:233586/1‑149 (MQ=255) cAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TAt < 1:607353/149‑1 (MQ=255) aaGCTTATAAGGATGAAGGGGAACTGACCGACAGGACAGATAGTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TAt > 2:442530/2‑149 (MQ=255) cTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCaa < 1:231662/149‑1 (MQ=255) ttttAAGGATGAAGGGGAACTAACCGAAATGATAGAAAGGACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAAt > 1:554839/1‑149 (MQ=255) tAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGa < 2:22058/149‑1 (MQ=255) aaGTATGAAGGTGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGAc < 2:167530/149‑1 (MQ=255) gATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGGAGTGCCTTTTTTGCCATGTCAGAGCAAGCCGCTGATAGAG‑TATCAATTGACGtt > 1:296162/1‑149 (MQ=255) tGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGGTaa > 1:598313/1‑149 (MQ=255) tGAAGGGGAACGAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAAGTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTaa < 1:318806/149‑1 (MQ=255) aGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATAAATTGACGTTAAggg > 2:71397/1‑148 (MQ=255) tAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTTTTTTTTTTGCGCAAGCCGCTGATAGAG‑TATCTATTGACGTTAAGGTggcgctag > 2:375121/1‑142 (MQ=255) tAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTgg > 1:177011/1‑149 (MQ=255) aTGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTCTTTTCCGATGTCAGCAAATGTTTGTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCa < 1:363473/149‑1 (MQ=255) gACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGCAGCTGCAGc > 2:543933/1‑149 (MQ=255) aCAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCt > 1:5101/1‑149 (MQ=255) cAGATATTACAGGCGATCTGACGGTCCTGGTGGAGGCAATATGAATGATGTAAAATTTCTGATTGCTGGAAGTGCCTTTTTTGCCATGTCAGCGCATGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCtt < 2:486647/149‑1 (MQ=255) cAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCtt < 2:721598/149‑1 (MQ=255) aGATATTACAGGCAATCTGACGGTCCTGGAGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTTAGGTGACTCTGGAAGCTGCAGCTTg > 1:458433/1‑149 (MQ=255) atatTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTa < 1:685021/149‑1 (MQ=255) tatTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTAc < 1:145102/149‑1 (MQ=255) ttACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTc > 2:621405/1‑149 (MQ=255) aCAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCGGCGCAAGCCGCTGATAGGG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCa < 1:592311/149‑1 (MQ=255) cAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCaa < 1:196064/149‑1 (MQ=255) aGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAAt > 2:712803/1‑149 (MQ=255) aGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAAt > 2:712857/1‑149 (MQ=255) gCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGGGACCCTGGAAGCTGCAGCTTGTACTCCAATAc > 2:94297/1‑149 (MQ=255) aaTCTGACGGTCCTGGTGGAGGCAATATGAACAATGGAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCTAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTa < 1:462797/149‑1 (MQ=255) aaTCTGACGGTCCTGGTGGAGGCAAGATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCTAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTa < 1:462832/149‑1 (MQ=255) aTCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATGGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTaa < 1:333414/149‑1 (MQ=255) aTCTGACGGTCCTGGTGGAGGCAAAATGAACAATGCAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACtca > 2:499295/1‑147 (MQ=255) tCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAg < 2:233776/149‑1 (MQ=255) cTGACGGTCCTGGGGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TACCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGc < 2:378656/149‑1 (MQ=255) ggTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCGAGTTCAGCGCACGCAACTGTTAGAG‑TATCAATTGACGTTAAAATTGCTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcgg > 1:177816/1‑149 (MQ=255) ggTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcgg > 1:453157/1‑149 (MQ=255) cTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTTTTTTTTTTGCGCAAGCAGCTGATAGAG‑TAGCAATTGACGTTAAGGTGAGGCTGGAAGCTGCAGCTTGTACTCCACTACTAAGCAACGGCGGa > 2:703688/1‑149 (MQ=255) cTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGa < 1:157638/149‑1 (MQ=255) cTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTATTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAGGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGa > 2:412602/1‑149 (MQ=255) aGGCAAAATGAAGAATGTAAAATTACTGATGGCCGGAAGTGCCTTTTTGGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTa < 2:542299/149‑1 (MQ=255) aGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTa < 2:624364/149‑1 (MQ=255) ggCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTaa > 2:43653/1‑149 (MQ=255) gCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGGTAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAACAACGGCGGAGTTGGTAAc > 2:710918/1‑149 (MQ=255) cAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACt < 1:707536/149‑1 (MQ=255) aaaaTGAACAATGTAAAATTACTGATTGGCGGAAGTGCCTTTTGTGCCAGGTCAGCGCAAGGCGCTGATAGAG‑GATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACtt < 2:66895/149‑1 (MQ=255) aaaaTGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTTTTTTTTTTTCTCAAGACGATGATAGAG‑GATCAAATGACGGGAAGGTGACTGTGGAAGCTGCAGCTTGTACACCAATACAAAGAAACGGAGGAGTTTTTATCtt > 2:472407/1‑149 (MQ=255) aaaaTGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTTTTTTTTTTTCACAAGCCGCAGATAGAG‑TATCAATTAACGTTGAGGTGGAAGTTGCAGCTGTAGCTTTTACTCCCATACTAAGAAAAGGATGAGATTTTGACtt > 2:37093/1‑149 (MQ=255) aaTGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCg < 1:149988/149‑1 (MQ=255) aaTGAACAATGTAAAATTACTGATTACCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCg < 2:749274/149‑1 (MQ=255) aTGAACACTGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCgg < 1:262255/149‑1 (MQ=255) aaCAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTTTTTTTTTTTTTCAAGCCGATGAAAGAA‑TATCATTTTACGTGAAGGTGAGTCTGGAATCTGCAGCTTGTTCTCCAATTCTAACCGACGGCGAACTTATTAACTTCgggcg > 2:392702/1‑146 (MQ=255) aaCAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAg > 1:164635/1‑149 (MQ=255) cAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAGGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTc > 1:531231/1‑149 (MQ=255) cAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGGG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTc > 1:502492/1‑149 (MQ=255) tGTAAAATTACTGCCTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCAtt < 1:97577/149‑1 (MQ=255) tGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCAtt > 2:402454/1‑149 (MQ=255) tGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGCAGTTAACTCCGGTAGTCAtt > 2:167940/1‑149 (MQ=255) ggaaaaTCACTGATGGCCGGAAGCGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGAGAGAG‑TATCAATTGACGTAGAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCACCGGCGGAGGTGTTAACTTCGGTAGTCCTTc > 2:464253/3‑149 (MQ=255) gcaaaaTTACTGAATGCCGGAAGTGCCTTTTTTGCCATGGCAGCGCAAGCCGCTGAGAGAG‑TCTCAAATAACGTTAATGTCACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTc < 2:269934/147‑1 (MQ=255) gTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATGGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTATACTTCGGTAGTccatc > 2:506520/1‑145 (MQ=255) gTAAAATTACTGATTGCCAAAAGTGCCTTTTTTGCTATGTTTACGCAAGCCGCAGAACGCG‑CATCAATTGAAGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGACGGAGTGGTTAACATAGGTAGTCATTc > 2:464270/1‑149 (MQ=255) aaaTTACTGATGGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGt < 1:312273/149‑1 (MQ=255) aaaTGACTGATTGCCGGAAGTGCTGTTGTTGCCATGGCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGt < 2:654702/149‑1 (MQ=255) ttACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATCCTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCaa < 1:119234/149‑1 (MQ=255) tACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAAt < 1:621405/149‑1 (MQ=255) tGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGTAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTATCGTCGGTAGTCATTCAGTCAATAGa < 1:419854/149‑1 (MQ=255) aTTGTCCGAAGTGGCCTTTTTGCCATGGTAGCCCCAGCCGCCGAAAGAGTTACCAATTGACGTTAAGGGGCCTCGGGAAGCGTCA‑CCTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACt < 2:58155/149‑1 (MQ=255) tGCCGGAAGTGCCTTTCTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑GATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACttt < 1:511702/149‑1 (MQ=255) aaGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑CATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTTAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgc < 1:433390/149‑1 (MQ=255) aGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgca > 2:365516/1‑149 (MQ=255) gTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgcag < 1:585696/149‑1 (MQ=255) gCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgcagca < 2:285981/149‑1 (MQ=255) gCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACgcagca < 2:177011/149‑1 (MQ=255) ccTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCAc > 1:747556/1‑149 (MQ=255) cTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCGGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGCCATTCAGTAAATAGACTTTCAATGCAGCACt > 2:289048/1‑149 (MQ=255) ttttttGCCATGTAAGCGCAAACCGCTAATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTCGTCCTACACTCTATAGCCTTTCAACGCAGCACTa > 2:156865/1‑149 (MQ=255) tGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTacacac < 1:91701/149‑1 (MQ=255) ccATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACCCAg > 1:641374/1‑149 (MQ=255) aTGTTAGCGCAAGCCGCTGATAGAG‑TACCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACCAAGCAACGTCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGAt < 2:455774/149‑1 (MQ=255) aTGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGAt < 1:696315/149‑1 (MQ=255) gTCAGCGCAAGCCGCTGATAGAG‑TATCAGTTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTg > 1:491865/1‑149 (MQ=255) gTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTg < 2:502492/149‑1 (MQ=255) | CCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAG‑TATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTG > NC_000913/3366828‑3367119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |