New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 248332NA (NA)3 (0.040) 3/266 NT 2.8% noncoding (186/188 nt) REP19 (repetitive extragenic palindromic) element; contains 4 REP sequences REP19 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 4633164 = 103 (1.300)noncoding (73/140 nt) REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

ACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGG  >  NC_000913/248185‑248480
                                                                                                                                                   |                                                                                                                                                    
aCTTGTGCCGGATCGGTAGGCCGGATAAGGCGGTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCATTCACGCCGCATCCgg                                                                                                                                                     <  2:1336605/149‑1 (MQ=255)
aCTTGTGCCGGATCGGTACTCCGGATAAGGCGTATATGCCGCATCCGGCAGTTATGCGCGCCGTCCTGATGCGAAGCCGACACTTCTTATCATGCCTACCAACTCGTGCCTGAACGGTAGGACGGATAGGGCGTGCACGCCGCATCCgg                                                                                                                                                     >  1:1066796/1‑149 (MQ=255)
 cTTGTGGCGGAGCGGGGGGCTGGAGAGGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGc                                                                                                                                                    <  2:772714/149‑1 (MQ=21)
  gtgtgTCGGATCGGTAGGCCGGATAAGGCGGTTGTGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCa                                                                                                                                                   <  1:1180368/148‑1 (MQ=255)
     tgCCGGATCGGTAGGCCGGTTAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGCACGGTAGGACGGATAAGGCGTTCCCGCCGCATCCGGCAggt                                                                                                                                                >  2:536418/1‑147 (MQ=255)
     tgCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGCTGTTAGATTCTTCGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGtt                                                                                                                                                <  1:1061374/149‑1 (MQ=25)
       ccGGATCGGTAGGACGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTtgt                                                                                                                                              <  2:499805/149‑1 (MQ=255)
        cGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAATTATGCGCAGAGTCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGGTAAGGCGGTCACGCCGCATCCGGCAGTtgtg                                                                                                                                             >  1:773092/1‑149 (MQ=25)
          gATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCAACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCa                                                                                                                                           >  1:976236/1‑149 (MQ=255)
               gTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTCGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCaag                                                                                                                                      >  2:621681/1‑148 (MQ=255)
                tAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATg                                                                                                                                     >  1:1149264/1‑149 (MQ=255)
                tAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATg                                                                                                                                     >  2:972176/1‑149 (MQ=255)
                     cGGAGAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGa                                                                                                                                <  2:962743/149‑1 (MQ=255)
                         tAAGGCGTTTCTGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACt                                                                                                                            <  2:225977/149‑1 (MQ=255)
                             gCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACCAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCCGTTGTGCACCAATGCTGGCTACTTACa                                                                                                                        >  2:26721/1‑149 (MQ=255)
                                     gCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCTTACAAGCTTGTGCGTGAGCGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCGGTTGTGCACCAATGCTGGGTGCTTACGTCAACGcc                                                                                                                >  2:111789/1‑149 (MQ=21)
                                      ccGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGccc                                                                                                               >  2:1329678/1‑149 (MQ=255)
                                      ccGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGTCACCAATGCTGGATACTTACATCAACGccc                                                                                                               <  1:713370/149‑1 (MQ=255)
                                       cGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGcccc                                                                                                              >  2:1210663/1‑149 (MQ=255)
                                       cGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGcccc                                                                                                              >  2:971826/1‑149 (MQ=255)
                                        gCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGccccc                                                                                                             <  1:122144/149‑1 (MQ=255)
                                             cGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCGCCAATGCTGGATACTTACATCAACGCCCCCATAAt                                                                                                        >  2:172948/1‑149 (MQ=255)
                                             cGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCCATGCTGGATACTTACACCAACGCCCCCATAAt                                                                                                        >  2:724179/1‑149 (MQ=255)
                                              ggCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATc                                                                                                       <  2:527844/149‑1 (MQ=255)
                                              ggCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATc                                                                                                       <  1:1314179/149‑1 (MQ=255)
                                              ggCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATc                                                                                                       <  1:95740/149‑1 (MQ=255)
                                                 aGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTc                                                                                                    <  2:732375/149‑1 (MQ=255)
                                                 aGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTc                                                                                                    <  2:1440171/149‑1 (MQ=255)
                                                   ttATGCGCCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCaa                                                                                                  <  2:933256/149‑1 (MQ=255)
                                                           aGATGCCTGATGCGACGCTGGCGCGTCTTATCCTGCCTACAACCTCGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCt                                                                                          <  1:36689/149‑1 (MQ=255)
                                                             attccTGATGCGGCTCTGTCGCTGCGTATCGTGCCTAGAGACTTGGGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGTCAGTTGCCCACCAATGCGGGCGGTATGCATCGACGCCCCCATAAACTTCAACTCCCGCTcc                                                                                        >  2:1023808/4‑148 (MQ=16)
                                                               gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACCTCAACGCCCCCATAATCTTCAACTCCCGCTCATc                                                                                      >  1:458222/1‑149 (MQ=255)
                                                                 ccgATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCg                                                                                    <  1:610121/147‑1 (MQ=255)
                                                                  tGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCgg                                                                                   >  1:92737/1‑149 (MQ=255)
                                                                   gATGCGACGCTGGCGCGTCTTATGATGCCTACAAACTTGTTCCTTATCGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGc                                                                                  >  2:1181704/1‑149 (MQ=255)
                                                                   gATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCACCGCCCCCATAATCTTCAACTCCAGCTCATCCGGc                                                                                  >  2:1181964/1‑149 (MQ=255)
                                                                    aTGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCCGCTCATCCGGcc                                                                                 >  2:156714/1‑148 (MQ=255)
                                                                    aTGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCa                                                                                 <  1:1437929/149‑1 (MQ=255)
                                                                    aTGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGATCCCGCAGCATCCGGCAGTTGTGGACCAATGCTGGATACTTACATAAACGCCCCCATAAACTTCAACTCCAGCTCATCCGGCa                                                                                 >  2:34348/1‑149 (MQ=37)
                                                                        gACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCCGCTCATCCGGCACTTc                                                                             >  1:1400640/1‑149 (MQ=255)
                                                                        gACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTc                                                                             <  1:795537/149‑1 (MQ=255)
                                                                         aCGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCg                                                                            >  1:1348260/1‑149 (MQ=255)
                                                                            cTGGCGCGGCTTAGCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTta                                                                         <  1:1272389/149‑1 (MQ=255)
                                                                               gcgcGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCGACTCCAGCTCATCCGGCACTTCGttccaa                                                                      >  1:217610/1‑145 (MQ=255)
                                                                               gcgcGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATAc                                                                      <  1:92788/149‑1 (MQ=255)
                                                                               gcgcGGCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCAGCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATAc                                                                      <  1:613926/149‑1 (MQ=255)
                                                                                 gcgTTTTATCATGCCTACAAACTGGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGa                                                                    <  2:564465/149‑1 (MQ=255)
                                                                                 gcgTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGa                                                                    <  2:555508/149‑1 (MQ=255)
                                                                                 acgTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATTCATATAAACTCCAGCTCATCCGGCACTTCGTTATACGa                                                                    <  1:1073277/148‑1 (MQ=37)
                                                                                  cgTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCCCCAATGCTGGACACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGAc                                                                   <  1:861281/149‑1 (MQ=255)
                                                                                   gTCTTATCATGCCTACAACCTTACCCCTTAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACa                                                                  <  2:1386491/149‑1 (MQ=39)
                                                                                      ttATCATGCCTACAAACTGGGGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGca                                                               <  2:204698/149‑1 (MQ=255)
                                                                                      ctATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAAGCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGca                                                               <  1:127700/148‑1 (MQ=255)
                                                                                       tATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGcac                                                              <  1:1336299/149‑1 (MQ=255)
                                                                                        aTCATGCCTACAATCTTGCGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGcaca                                                             <  1:21051/149‑1 (MQ=255)
                                                                                         tCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCCGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAAGCGTCAACTCCAGCTCCTCCGGCACTTCGTTATACGACAGCACAt                                                            >  1:125780/1‑149 (MQ=255)
                                                                                            tGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCa                                                         >  2:163326/1‑149 (MQ=255)
                                                                                             gCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCGCTTCGTTATACGACAGCACATGCAg                                                        >  1:384334/1‑149 (MQ=255)
                                                                                              ccTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGc                                                       <  1:1206671/149‑1 (MQ=255)
                                                                                               cTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGcc                                                      >  1:786007/1‑149 (MQ=255)
                                                                                                tACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCCACGCCCCCATCATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGCCAGCACCTGCAGccc                                                     >  2:1322818/1‑149 (MQ=255)
                                                                                                tACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACGTCGTTCTACGGCAGAACATGCAGccc                                                     >  1:1443234/1‑149 (MQ=255)
                                                                                                tACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTGGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTCCGTTATACGACAGACCATGCAGccc                                                     >  2:495643/1‑149 (MQ=255)
                                                                                                  cAAACTTGTGCCTGCACGGTCGGACGGCTAAGGCGTTCACGCCGCATCCGCCCGATGTGCACCAATGCTAGATACTTACATCCACGCCACCACACTCTTCCACACCCCCTCATCCGGCCCTTCGTTATACGACACCACATGCACCCCCg                                                   >  2:384773/1‑149 (MQ=255)
                                                                                                   aaaCTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCgg                                                  >  1:505563/1‑149 (MQ=255)
                                                                                                   aaaCTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACACCACATGCAGCCCCgg                                                  >  1:398366/1‑149 (MQ=255)
                                                                                                    aaCTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCAGTTCGTTATACGACAGCACATGCAGCCCCggt                                                 <  2:1066796/149‑2 (MQ=255)
                                                                                                       ttGTTCCTGAACGGGAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCa                                              <  2:830053/149‑1 (MQ=255)
                                                                                                       ttGTGCCTGAACGATAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCGGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCa                                              >  1:1030886/1‑149 (MQ=255)
                                                                                                         gtgCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCaaa                                            >  2:71801/1‑149 (MQ=255)
                                                                                                             cTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGCGACTTACATCGACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACCGCGCATGCAGCCCCGGCGCAaacaac                                        >  1:200460/1‑149 (MQ=39)
                                                                                                             cTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACACGCAGCCCCGGCGCAaacaac                                        >  2:101836/1‑149 (MQ=255)
                                                                                                                aaCGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCtt                                     <  2:31472/149‑1 (MQ=255)
                                                                                                                aaCGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCtt                                     <  2:976236/149‑1 (MQ=255)
                                                                                                                    gTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCACACAACCTTGCAt                                 >  1:1225316/1‑149 (MQ=255)
                                                                                                                       ggACGGATAAGGCGTTCACGCCGCATCCGtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacac                                                                       <  1:166764‑M1/108‑80 (MQ=255)
                                                                                                                       ggACGGATAAGGCGTTCACGCCGCATCCGtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacac                                                                       >  2:166764‑M1/1‑29 (MQ=255)
                                                                                                                         aCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATACTCTTCAACTCCCGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCACACACCCTTGCATAAcgc                            >  1:670398/1‑149 (MQ=255)
                                                                                                                         aCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAATCTTGCATAAcgc                            >  1:676505/1‑149 (MQ=255)
                                                                                                                           ggATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGCAAGAACATGCAGCCCCGGCTCAAAGCACCTTGCATAAcgctc                          >  1:1121479/1‑147 (MQ=255)
                                                                                                                           ggATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACgcgc                          <  1:1193515/149‑1 (MQ=255)
                                                                                                                           ggATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTGCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATCAcgccc                          >  1:1109108/1‑147 (MQ=255)
                                                                                                                           gcaTAAGGCCTTCCCCCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACgcgc                          <  1:1193635/147‑1 (MQ=255)
                                                                                                                             aTAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACGACCTTGCATAACGCGccc                        >  1:1275552/1‑148 (MQ=255)
                                                                                                                                  gCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCGCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCaaa                   >  2:943660/1‑149 (MQ=255)
                                                                                                                                  gCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTCGCATACCGCGCCAGCaaa                   >  1:435808/1‑149 (MQ=255)
                                                                                                                                    gTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAgg                 <  2:1149264/149‑1 (MQ=255)
                                                                                                                                      tCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCACAATCTTCAACACCAGCTCATCCGGCACCTCGTTATACGACAGCCCATGCAGCCCCGGCTCAAACAACCTTGCATACCCCGCCAGCCAAGGgc               >  1:596449/1‑149 (MQ=255)
                                                                                                                                          gccgcATCCGGCAGTTGGGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACCTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAg           <  1:172948/149‑1 (MQ=255)
                                                                                                                                          gccgcATCCGGAAGTTGGGCACCAATGCTGGATACTTACATGAGCGCCCCCATAATCTTCAACTCCAGCTCATCCGCCACTTCGTTATACGACAGCAAATGCAGCCCCGCCGCAAAAAACCTTCCATAAGGCGGCAGAAAGGGGCGGAg           >  2:1438607/1‑149 (MQ=255)
                                                                                                                                               aTCCGtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacacggcattatgaaacggactcagcgccaggatcaccgcctggtgatagacgctggcgcgagtgagtt      <  1:1378845‑M1/149‑145 (MQ=255)
                                                                                                                                                tCCGtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacacggcattatgaaacggactcagcgccaggatcaccgcctggtgatagacgctggcgcgagtgagttt     >  1:1306602‑M1/1‑4 (MQ=255)
                                                                                                                                                tCCGtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacacggcattatgaaacggactcagcgccaggatcaccgcctggtgatagacgctggcgcgagtgagttt     <  2:13980‑M1/149‑146 (MQ=255)
                                                                                                                                                 ccGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGt    <  1:523378/149‑1 (MQ=255)
                                                                                                                                                  cGtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacacggcattatgaaacggactcagcgccaggatcaccgcctggtgatagacgctggcgcgagtgagtttcc   >  1:84806‑M1/1‑2 (MQ=255)
                                                                                                                                                  cGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGCCAGCACATGCAGCCCCGGCGCAACCAACCTTGCATAACGCGCCAGCCAAGGGCCAAGCTGCGGTg   >  1:198412/1‑149 (MQ=255)
                                                                                                                                                  cGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCCTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTg   <  1:492240/149‑1 (MQ=255)
                                                                                                                                                   gtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacacggcattatgaaacggactcagcgccaggatcaccgcctggtgatagacgctggcgcgagtgagtttccc  >  2:542488‑M1/1‑1 (MQ=255)
                                                                                                                                                   gtcctacaaatacccgtaatttcaatatgtttggtaggcatgataagacgcggcagcgtcgcatcaggcgcttaatacacggcattatgaaacggactcagcgccaggatcaccgcctggtgatagacgctggcgcgagtgaggttccc  >  1:736512‑M1/1‑1 (MQ=255)
                                                                                                                                                   ggCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACATAGTAATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCCCCAGCAAAGGGCGCAGCTGCGGTgg  >  1:1066054/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
ACTTGTGCCGGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACTTGTGCCTGAACGGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCTGGATACTTACATCAACGCCCCCATAATCTTCAACTCCAGCTCATCCGGCACTTCGTTATACGACAGCACATGCAGCCCCGGCGCAAACAACCTTGCATAACGCGCCAGCAAAGGGCGCAGCTGCGGTGG  >  NC_000913/248185‑248480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.