| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,980,742 | A→T | 7.3% | intergenic (‑109/+20) | ygeA ← / ← araE | Asp/Glu_racemase family protein/arabinose transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,980,742 | 0 | A | T | 7.3% | 290.4 / 12.5 | 109 | intergenic (‑109/+20) | ygeA/araE | Asp/Glu_racemase family protein/arabinose transporter |
| Reads supporting (aligned to +/- strand): ref base A (56/40); new base T (6/2); total (64/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.25e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCAGCGCAGTGT > NC_000913/2980595‑2980889 | ttCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATGTCTATTAACGAAAAAAGGGCCGGATGTACAg > 1:979534/1‑149 (MQ=255) cctgCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCACCGGCCAAGTGCCCAATCTCTAGTAACGAAAAAAGGGCCGGATGAACAGcac > 2:926593/4‑149 (MQ=255) ccAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATCAGGAACGAGACAAAC‑GCCTCAACGGCCAGGTGCCCAATCTCTATTACCGAAAAAAGGGCCGGATGTCCGGcac > 2:480747/1‑149 (MQ=255) ccAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAAGAAGGAACGGGACAAAC‑GCCTCACCGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGgac > 1:191499/1‑149 (MQ=255) ccAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCCGATGTGTGTTACCGCAACAAGGATGCATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCGCTATTAACGAAAAAAGGGCCGGATGTACAGcac > 2:1212565/1‑149 (MQ=255) cAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGACCGGGTCTAACAGCCT‑AATGGCCAAGCTGCCAGTCGCTATTAACGAAAAAATGGCCGGATGTACAGcaca > 2:1027984/1‑149 (MQ=255) cAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGcaca > 2:1190221/1‑149 (MQ=255) cTCATTCCTCCCAGCAACCCCATGGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATcc < 1:319970/149‑1 (MQ=255) cATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCgg < 1:1169822/149‑1 (MQ=255) cATTCCCCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCgg < 1:435708/149‑1 (MQ=255) ttCCTCCCAGCAAACCAATTGTTTTCATTCCTTTCTCCTGTTGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGGCCAGTCTTTATTAACGAAAAAAGGGGCGGATGTACTGCACATCTGGcc > 2:64089/1‑149 (MQ=255) ttCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGACGTAACGCCCATCCGGcc > 2:292488/1‑149 (MQ=255) ccAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGaa > 2:760951/1‑149 (MQ=255) cAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGACTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCCCATCCGGCCCGTGaaa > 1:1196170/1‑149 (MQ=255) aGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACGTGGCTGAATAGGGAACGAGACCAAC‑GCCTCAACGGCGGAGTGCCCAGTCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAAt < 1:784152/149‑1 (MQ=255) aGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAAt > 1:968148/1‑149 (MQ=255) aGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAAt < 1:380909/149‑1 (MQ=255) ccAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACg > 1:375778/1‑149 (MQ=255) aaTTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAGGGAACGAGACAAAC‑GCATCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGACATCAGACGcc > 1:369584/1‑149 (MQ=255) aTTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGAGGTACAGCACATCCGGCCCGGGAAATCAGACGCCg > 2:696319/1‑149 (MQ=255) ttCACTCCTCTGTCCTGATGTTTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATAttt < 1:1081975/149‑1 (MQ=255) tCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtc < 1:1297138/149‑1 (MQ=255) cATGCCTCTCTCCTGATGTGCGTTACCGCAACCAGTCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtct < 1:1196961/149‑1 (MQ=255) aTTCCTCTCTCCTGATGTGAGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtctc > 1:1057967/1‑149 (MQ=255) ttCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCa < 1:1233712/149‑1 (MQ=255) tctctcCTGATGTGTGTTACCGCATCAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACtt > 1:1082060/1‑149 (MQ=255) ctcCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTtctc < 1:363205/149‑1 (MQ=255) ccTGATGTTGGTTACCGCAACAAGGCGGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCAAATAACGAAAAAAAGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGc < 2:137784/149‑1 (MQ=255) gATGTGTGTTACCGCAACAAGGCTGAATAAGGAAGGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTCTTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCCTGAAATCAGACGCCGATATTTCTCAACTTCCCGCCTg > 2:488721/1‑149 (MQ=255) aTGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGc > 2:190842/1‑149 (MQ=255) tgtgtgTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGcc < 2:1014385/149‑1 (MQ=255) gttttACCGCAACAAGGCTGAATAAGGAACGATACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGCTGCACCGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATc < 1:1135363/146‑1 (MQ=255) tgtTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCGTCa > 1:429055/1‑149 (MQ=255) gtTGCCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GGCCCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGCATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg < 2:1039204/149‑1 (MQ=255) gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg < 2:167461/149‑1 (MQ=255) gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg > 1:950346/1‑149 (MQ=255) gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg > 1:695792/1‑149 (MQ=255) gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg > 1:1121172/1‑149 (MQ=255) aaCCGCAACAAGGCTAAATAATTAACGTGACAAAC‑GCCTCACCCGCCCAGTGACCAATCTCTATGCACGAAAAAAGGGCCGGATGTACTGCTCATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGtt < 2:475652/148‑1 (MQ=255) tGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGt < 1:591692/149‑1 (MQ=255) gAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGtt > 2:1232506/1‑149 (MQ=255) gAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTCCTCACCTTCTCGCCTGCCATCAATTTGCGTTCGATATGtt > 1:534691/1‑149 (MQ=255) aTAAGGTACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCACTAATAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAACAAGACGCCGAGAGTTCACAACTCCTCACCCGCCGACAGTTTACGTTCGATATGTTcc > 2:912906/1‑149 (MQ=255) aTAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCGATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCTCCTGCCATCAGTTTGCGTTCGATATGTTcc < 1:760951/149‑1 (MQ=255) tAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCa > 2:541823/1‑149 (MQ=255) aaGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATAGGTTccga > 1:589113/1‑147 (MQ=255) ggAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCCGCCATCAGTTTGCGTTCGATATGTTCCAGCg > 1:1196977/1‑149 (MQ=255) gAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGt < 2:1207030/149‑1 (MQ=255) aCGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTgc > 2:1122537/1‑148 (MQ=255) cGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGAc > 2:1419907/1‑149 (MQ=255) gagaCAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACa < 2:1057967/149‑1 (MQ=255) agaCAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGGTATGTTCCAGCGTGACAt > 1:859622/1‑149 (MQ=255) gaCAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCGTGGCATCAGTTTGCGTTCGATCTGTTTCAGCGTgcactt > 1:364085/1‑144 (MQ=255) gaCAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt > 2:223319/1‑149 (MQ=255) gaCAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt > 1:913911/1‑149 (MQ=255) aatc‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCGGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAttttt < 1:463833/146‑1 (MQ=255) aaC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCCCAACTTCTCGCCGTCCACCAGTTTGCGTTCAATATGCTCCAGCGTGACATTTTTg > 1:156360/1‑149 (MQ=255) c‑GCCTCAACGGCCAAGTGCCCAACCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGt < 1:432792/149‑1 (MQ=255) cTCAACGGCCAAGTGCCCCATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCTTTCGATATGTTCCAGCGTGACATTTTTGGTTTc < 1:933362/149‑1 (MQ=255) cTCAACGGCCAAGTGCCCAATATATATTAAGGATAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTc > 1:1442797/1‑149 (MQ=255) cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCg < 1:258695/149‑1 (MQ=255) acagCCAAGTGCCCAAGCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATAATTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGa < 2:979534/146‑1 (MQ=255) aCGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGa > 2:1203145/1‑149 (MQ=255) cGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGaa < 1:1386663/149‑1 (MQ=255) ccAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGa < 1:223319/149‑1 (MQ=255) cAAGTGCCCAATCTCTATTAACGAAAAACGGGCCGGATGTACAGCACATCAGGCCCGTTAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTATGAATTCAATGGGGTCCAGCGTGACATTTTTGGTTTCCGGAATGAg < 2:966316/149‑1 (MQ=255) gTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCa < 1:1190221/149‑1 (MQ=255) gTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGGTTCCGGAATGAGCCa > 2:1215395/1‑149 (MQ=255) gTGCCCAAGCTCTATTAACGAAAAAAGGGCCGGATGTACCGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCa < 2:927087/149‑1 (MQ=255) tGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAg > 2:179712/1‑149 (MQ=255) cccAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATTTTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGccgcaa > 2:978377/1‑145 (MQ=255) aaTCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGt < 2:913911/149‑1 (MQ=255) ctATTAACGAAAAATGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATCAGCCAGAAAGTAATGc < 1:912851/149‑1 (MQ=255) tATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGAAATGAGCCAGACAGTAATGcg > 2:211117/1‑148 (MQ=255) tATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCAGGACTGAGCCAGAAAGTAATGcc > 2:872230/1‑149 (MQ=255) tATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGGTTCCGGAATGAGCCAGAAAGTAATGcc > 1:380916/1‑149 (MQ=255) aTTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCACAACTTCTCGACTGCCATCCGTTTGCGTTCGATATGTTCCACCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAGGTAGTGacc > 2:904447/1‑149 (MQ=255) aCGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTAAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACaa > 2:232784/1‑149 (MQ=255) cGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACaaa < 2:1429088/149‑1 (MQ=255) gAAAAAAGGGCCGGGTGTACAGAACATCCGGCCCGTGGAATCAGACGCCGCTATTTCTAAACTTCTCGCCTGCCCTAAGCTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGCAGTAGCAAGAAACAAAGGCCCCCacac > 2:91521/1‑149 (MQ=255) gAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAGTCAGACGCCGATATTTCCCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAAc < 2:684022/149‑1 (MQ=255) gAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAAc > 1:178949/1‑149 (MQ=255) aaaaaGGGTCTGATGTACAACACATCCGGCCCGTGAAATCAGCCGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGc < 2:589113/149‑1 (MQ=255) aaaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTCCCATCAGTTTGCGATCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCa > 2:1212933/1‑149 (MQ=255) aaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAAt < 2:586170/149‑1 (MQ=255) gggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTGGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGCGTGGACCAGAAAGTAATGCCCACAAACGGAATga > 1:1110399/1‑148 (MQ=255) gggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATCAGCACCGGCGGGACAGTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACGAACGCAATGt > 1:698803/1‑149 (MQ=255) gggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGGCCACAAACGCAATGt > 1:751630/1‑149 (MQ=255) gCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACACACGCatgtttc > 1:1328736/1‑143 (MQ=255) ccGTATGTCCAGCACATCCGGCCCGTGAAATCAGACGCCGTTATTTCTCACCTCCTCCCGTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTGGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCa < 2:226546/149‑1 (MQ=255) ccGGATGTGCTGTACATCCGGCCGGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCa > 1:806076/1‑149 (MQ=255) ccGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCa > 2:215494/1‑149 (MQ=255) ggATGTATAGCTCATCCGCCCCGTGAAAGCAGACGCCGATATTGCTCAGCTTCTCGCCTGCCATCAGTTTGCGTTCGATAGGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCAgc < 2:191499/149‑1 (MQ=255) ggATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCAgc < 2:698488/149‑1 (MQ=255) tACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCAGCGCAgt < 2:695792/149‑1 (MQ=255) tACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGATTGCGTTCGATATGGTCCAGCGTGCCATTTTTGGGTTCCGGCATCAGCCGGAAAGGAATGCCCACAAACGCGATGTTCAGGGCAgt > 1:976181/1‑149 (MQ=255) aCAGCACATCCGGCCCGTGAAATCAGCCGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCATCGCAgtg < 2:968148/149‑1 (MQ=255) aCAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAACCGCAATGTTCAGCCCAgtg > 1:1269734/1‑149 (MQ=255) aCAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAAGGTTCAGCGCAggg > 1:497094/1‑147 (MQ=255) cAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTCATGCCCACAAACGCAATGTTCAGCGCAgtgt > 1:1358118/1‑149 (MQ=255) | TTCCCAGCTCATTCCTCCCAGCAAACCAATTGTTTTCATTCCTCTCTCCTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAAC‑GCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCGGAATGAGCCAGAAAGTAATGCCCACAAACGCAATGTTCAGCGCAGTGT > NC_000913/2980595‑2980889 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |