New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2267293 (0.060)5 (0.110) 5/286 5.9 63.1% noncoding (971/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 2728238 = NA (NA)noncoding (945/2904 nt) rrlG 23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.

CTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGAC  >  NC_000913/226581‑226749
                                                                                                                                                    |                    
cTATGTAGGGAGCGCCTCGTGAACTCATCTCCGGGGGTAGGGGACTGTTTCGGCCAGGGGGTCATCCCGACTTACCAACCCGGTGCAAACTGCGAATACCGGAGAATGTTATCTCGGGAGACACACGGCGGGTGCTAACGTCCGTCGTg                      <  2:374002/149‑1 (MQ=11)
     tAGGGAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAagag                 <  2:296234/149‑1 (MQ=17)
       ggTAGCGCCTCGTGAACTCATCTCAGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAggg               <  2:285500/149‑1 (MQ=17)
                    gAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGAc  <  1:626483/149‑1 (MQ=32)
                                                                                                                                                    |                    
CTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGAC  >  NC_000913/226581‑226749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.