New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2304840 =	NA (NA)	7 (0.150)	4/280	6.3	29.0%	noncoding (426/655 nt)	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
	?	NC_000913	2304921 =	18 (0.370)					noncoding (507/655 nt)	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
Rejected: Coverage evenness skew score above cutoff.

ACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGAC  >  NC_000913/2304774‑2305045                                                                                                                                                    |                                                                                                                             aCGCCGCATCCGACATCCAACGTCCGCGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGc                                                                                                                             <  1:611956/149‑1 (MQ=17)   gccgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGGCGGATAAGGCGGTTGCGCCGCATCCGCCGCCTAACGACCAAGCCGGTTGcca                                                                                                                           >  1:108703/1‑148 (MQ=11)     cgcATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGCCGCGTCTTATCAGCCCTACACCACTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGa                                                                                                                         >  1:344213/1‑149 (MQ=12)      gcATCCGACATCCAACGTCCGAGCCGGTTGCCTGACGCGACGCTGGAGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTCGGTCGGGTCCGGGCGCCACTTCGCGTGCGAAATCTAAGGCCGAAGCAGGTTGCCTgca                                                                                                                        >  2:492421/1‑147 (MQ=11)            gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGGCGGGTAAGGCGGTTACGCAGCATCCGACATCTAACGCCCCAGCCAGTTGCCTGATGCGACg                                                                                                                  >  2:760479/1‑149 (MQ=11)                   aaCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgcac                                                                                                           >  1:383258/1‑147 (MQ=17)                     cGTCCGAGCCGGTTGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGt                                                                                                         <  1:574842/149‑1 (MQ=17)                      gTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTAGACCGCTGTGAAGTGGTGCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCGAGCCGGTTGCCTGGTGGGAGGCTgggggggg                                                                                                        >  2:210052/1‑143 (MQ=11)                                                                                                cggTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCt                              <  1:246795/148‑1 (MQ=17)                                                                                                cggTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCt                              <  1:247087/148‑1 (MQ=18)                                                                                                         aaGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGa                     <  2:271612/149‑1 (MQ=39)                                                                                                            gCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGCGACGTGCCCCACCCCGTAGGTCGGATCAGGCGGTTACGCCGCATCCCACATCTACCGCCCGGGcc                  >  2:349676/1‑149 (MQ=11)                                                                                                                 tACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCGGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTg             <  2:770961/149‑1 (MQ=255)                                                                                                                  aCGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGc            <  1:502762/149‑1 (MQ=39)                                                                                                                    gccgcATCCGACATCAAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGGAGTGCCCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCt          >  2:454991/1‑149 (MQ=255)                                                                                                                         aTCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCCACATCTAACGCCCGAGCAGGTTGCCTGAGGc     >  2:215471/1‑149 (MQ=255)                                                                                                                            cGACATCTAACGCCCAAGCCGGTTGCCTGCTGCGCCGCCGGCGCGTCTTATCAGGCCAACTCAGCTGGGTAGTGCTCCCCCCCGTAGGGTGGATAAGACGGTTACGCCGCATCCCACACCTACCGCCCGAGCCGGTTGCTTGCAGCGAc  >  2:31568/1‑149 (MQ=11)                                                                                                                            cGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCCCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCCACATCTAACGCCCGAGCCGGTTGCCTGATGCGAc  >  2:718861/1‑149 (MQ=21)                                                                                                                                                    |                                                                                                                             ACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGAC  >  NC_000913/2304774‑2305045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.