New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =30 (0.410)29 (0.450) 24/244 NT 51.1% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 29 (0.450)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

TTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGA  >  NC_000913/1209471‑1209767
                                                                                                                                                    |                                                                                                                                                     
ttatttGTCGGATAAGCCTTTGCCAGTTCAGGGTATTCTTCAGCAGAAAAAGCGGCACCATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCCGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAc                                                                                                                                                       >  2:117673/1‑149 (MQ=255)
ttatttGTCGGATAAGCCTTTGCCAGATAACCAGCTTGTGCTGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTTAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCccaacccaac                                                                                                                                                       >  2:282357/1‑149 (MQ=255)
     tGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCGTCGCCCAAACCAACGTTTa                                                                                                                                                  >  1:526558/1‑149 (MQ=255)
      gTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTAt                                                                                                                                                 <  1:452533/149‑1 (MQ=255)
           aTAAGCCTTTGCCAGTTCCGTGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                            <  2:25443/149‑1 (MQ=255)
            gcctttgccgcattccccccccacttaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                                                                           <  2:1059038‑M2/13‑1 (MQ=255)
               tttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                                        <  1:718607‑M2/16‑1 (MQ=255)
               tttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                                        >  1:711558‑M2/134‑149 (MQ=255)
               ttgccggcattcccccccccttgaatgattactgattgttcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                                        <  2:1161284‑M2/16‑1 (MQ=255)
                 cTTTGCCCGTTCCGGGTATTCTTCAGTAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaaga                                                                                                                                      <  2:690610/149‑1 (MQ=255)
                   cggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGaaa                                                                                                                                    <  2:1062153‑M2/20‑1 (MQ=255)
                       cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCCACGTTTATGAAAATGAAGAAATAAc                                                                                                                                >  1:479814/1‑149 (MQ=255)
                            acccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCa                                                                                                                           >  1:1286301‑M2/121‑149 (MQ=255)
                             cccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCaa                                                                                                                          <  1:289150‑M2/30‑1 (MQ=255)
                                    tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCACCAGGTAATGCAGAGCCTTCTCCCAAGCCGACGTTTATGGAAATGAAGAAATAACAAGCAAAT‑GGcat                                                                                                                  >  1:514903/1‑149 (MQ=255)
                                    tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGcat                                                                                                                  <  1:926861/149‑1 (MQ=255)
                                              aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCt                                                                                                        >  1:999257/1‑149 (MQ=255)
                                               tgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctattgtagccgttgctgcatggagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAG‑GGCATCATTACTGCtt                                                                                                       >  1:234693‑M2/102‑149 (MQ=255)
                                               aaaaGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCtt                                                                                                       <  1:355199/149‑1 (MQ=255)
                                               aaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCtt                                                                                                       <  1:1004606/149‑1 (MQ=255)
                                                gcttgctctataccaccaatcataaccggtatagctatgaaaccggtgcacgctgggggagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCttt                                                                                                      <  1:1213597‑M2/49‑1 (MQ=255)
                                                        aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAggg                                                                                              <  1:505318/149‑1 (MQ=255)
                                                            cccccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                          <  2:919222‑M2/61‑1 (MQ=255)
                                                             tGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                         <  1:1029227/149‑1 (MQ=255)
                                                             tGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGAtt                                                                                         <  1:1029271/149‑1 (MQ=255)
                                                             caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttatgctccttctcccaaaccaaCGTTAATGAAAATGACGAACTAACAAGCAAAT‑GGCATCATTCGTGCTTTACacaggggggtc                                                                                         >  2:617769‑M2/88‑146 (MQ=255)
                                                              accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAGGCAAAT‑GGCATCATTCCTGCTTTTCCCCGGgggaagt                                                                                        >  2:688650‑M2/87‑146 (MQ=255)
                                                              accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGAttt                                                                                        >  1:1083018‑M2/87‑149 (MQ=255)
                                                                 tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                     >  1:283720/1‑149 (MQ=255)
                                                                 aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCCTCATTCCTGCTTTTACACGGGGGATTtaaa                                                                                     >  1:481924‑M2/84‑148 (MQ=255)
                                                                   tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTGATGAAAAGGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                   <  1:1215622/149‑1 (MQ=255)
                                                                     ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCGTGCTTTTACCAGGGGGATTCAACATGc                                                                                 >  2:985659‑M2/80‑149 (MQ=255)
                                                                     ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                                 <  1:435107‑M2/70‑1 (MQ=255)
                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                         <  2:1262217‑M2/78‑1 (MQ=255)
                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                         <  2:121842‑M2/78‑1 (MQ=255)
                                                                                   tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCAATGTa                                                                   >  1:524932‑M2/66‑149 (MQ=255)
                                                                                     tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaAGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg                                                                 >  1:865121‑M2/64‑149 (MQ=255)
                                                                                       aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg                                                               >  1:1056514‑M2/62‑149 (MQ=255)
                                                                                        tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTACCATGCTTATTGGCTATGTACGCGt                                                              >  2:115204/1‑149 (MQ=255)
                                                                                          gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGtct                                                            >  1:1121589/1‑147 (MQ=255)
                                                                                              aaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGATATTTACGCGTATcaac                                                        >  2:526341/1‑149 (MQ=255)
                                                                                                 gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAATCCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                                     <  2:209686/149‑1 (MQ=255)
                                                                                                 gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                                     >  1:1211116/1‑149 (MQ=255)
                                                                                                 gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTACTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                                     >  1:825703/1‑149 (MQ=255)
                                                                                                    aCGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACTAACGTTTATGGAAATGAAGAAATAACAAGCAAAT‑GGCGTCATTGCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAATTGa                                                  >  2:1264465/1‑149 (MQ=255)
                                                                                                         aCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGa                                             <  1:147787/149‑1 (MQ=255)
                                                                                                          tagccgttgctgcattgagttttgctccttctcccaaacctaCTTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACCAATGACCAGaa                                            <  2:694858‑M2/107‑1 (MQ=255)
                                                                                                          ccgaggcacCAACAGGTAATGCAGAACCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAACT‑GGCATCATTCCTGCATTTACCAGGGGGATGTCACCAGCTTATTGGCTAGGTACGCGCGTCAACAAATGACCaaaa                                            >  2:764751/7‑149 (MQ=255)
                                                                                                          ccGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCGTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                            >  2:990190/1‑149 (MQ=255)
                                                                                                                 acCAACAGGTAATTGAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                                     <  2:670884/149‑1 (MQ=255)
                                                                                                                 acCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                                     <  1:215125/149‑1 (MQ=255)
                                                                                                                   ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                                   <  2:632145‑M2/116‑1 (MQ=255)
                                                                                                                   ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                                   <  2:931263‑M2/116‑1 (MQ=255)
                                                                                                                   ctgcattgacttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                                   <  1:1065554‑M2/116‑1 (MQ=255)
                                                                                                                   cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCCGAACACAGAACt                                   >  2:269317/1‑149 (MQ=255)
                                                                                                                      cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAACAACAAATGACCCGAACACAAATCTACa                                >  1:83733‑M2/31‑149 (MQ=255)
                                                                                                                       attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                               >  2:1284509‑M2/30‑149 (MQ=255)
                                                                                                                       attgagtcttgctcctcctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                               <  1:676363‑M2/120‑1 (MQ=255)
                                                                                                                            gttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTaa                          <  1:1190979‑M2/125‑1 (MQ=255)
                                                                                                                            aTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACAGAGATGTCCAACGCaa                          >  1:703783/1‑149 (MQ=255)
                                                                                                                                 gagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcgc                     <  2:1208716/149‑1 (MQ=255)
                                                                                                                                            caaacccaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa          <  1:606666‑M2/141‑1 (MQ=255)
                                                                                                                                            cAAACCAACGTTTATGAAAATGAAGCCACTACAAGCAAATAGATTTCAAATAT‑CTGTTACCAGGGGGATTTAACACGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa          <  1:939651/149‑1 (MQ=255)
                                                                                                                                                ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGAt      >  1:1154107‑M2/5‑149 (MQ=255)
                                                                                                                                                ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGATATGTGGACCATTTTACAAATGACCAGAACACAGATCTACAACGTAATGAGCTGAACTGTGCAGGAt      >  1:1271261‑M2/5‑149 (MQ=255)
                                                                                                                                                    cGTTGATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGa  <  2:701423/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT‑GGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGA  >  NC_000913/1209471‑1209767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.