New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 327138	26 (0.960)	3 (0.110)	3/288	3.8	10.5%	coding (110/1671 nt)	betA	choline dehydrogenase, a flavoprotein
	?	NC_000913	= 327162	26 (0.990)					coding (86/1671 nt)	betA	choline dehydrogenase, a flavoprotein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCATAAACGGTTCAGGTTCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGAATATGGACTGGAATTTAGCCATCTCAACCTGGATGGACTTCA  >  NC_000913/327030‑327307                                                                                                                                     |                                                                                                                                                  ttCATAAACGGTTCAGGCTCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATc                                                                                                                                   <  1:56803/149‑1 (MQ=255)   cATACACGGTTCAGGTTCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTACTCggcgctt                                                                                                                                 >  2:27767/1‑144 (MQ=255)    aTAAACGGTTCAGGTTCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTtc                                                                                                                                >  1:190498/1‑149 (MQ=255)     tAATCGGTCCAGGTTGCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTGGCGGGAATGCCAGGGCAGCGGGCATCTGGGGGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTtca                                                                                                                               <  1:60453/149‑1 (MQ=255)     tAAACGGTTCAGGTTCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTtca                                                                                                                               <  1:209085/149‑1 (MQ=255)              cAGGTTCCGTTTCCTAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACgg                                                                                                                      <  1:201600/149‑1 (MQ=255)                   tCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGCGGGGttgg                                                                                                                 <  2:56012/149‑4 (MQ=255)                               gCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGcc                                                                                                     <  1:348061/149‑1 (MQ=255)                                cccGGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCACGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCg                                                                                                    <  2:287403/149‑1 (MQ=255)                                cccAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAACGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGGGGTATGCGGAGCTTCAGTCAGACGGGTAGCGAGAACGTTGCCg                                                                                                    >  2:31545/1‑149 (MQ=255)                                 ccAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCgg                                                                                                   >  1:251986/1‑149 (MQ=255)                                          gCGGTTACCCGGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGGGCGGACGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGCCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCgg                                                                                          <  2:278636/149‑1 (MQ=255)                                                     gTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCCGAGCCGGCACCAATAatg                                                                               >  2:20452/1‑149 (MQ=255)                                                                                 cggggTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAAcctcct                                                   <  1:148119/147‑1 (MQ=255)                                                                                   gggTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGAAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTgg                                                 >  2:421990/1‑149 (MQ=255)                                                                                         ggAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAACACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGaa                                           >  1:44893/1‑149 (MQ=255)                                                                                                    cGATGGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGAATATGGACTGGa                                <  2:255040/149‑1 (MQ=255)                                                                                                    cGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGAATATGGACTGGa                                <  2:130333/149‑1 (MQ=255)                                                                                                          tCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACAGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGACTATGGGCTGGAATTTAg                          >  2:285549/1‑149 (MQ=255)                                                                                                          tCCGGGCCGCCCGCTTCAAGCAGCAGCAAGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGAATATGGACTGGAATTTAg                          <  1:83401/149‑1 (MQ=255)                                                                                                                  gcccgcTTCAAGCAGCAGCACGGAGGTATTCGGGTCTTCAGTCAGACGGGGAGCGGGAACGTTGCCGGCTGAGCCGGCGCCAATAATGTAGTAGTCAAATTGCAGATAAACCTCCTGGTTAGACTATGGCCTGGAAGTTAGcaagctaa                  >  2:1867/1‑142 (MQ=255)                                                                                                                          cAAGCAGCAGCACGGAAGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGATGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAGTTATCCGCCTTGGTAGAATATGGACTGGAATTTAGCCATCTCAACCtgaat          >  2:315361/1‑149 (MQ=255)                                                                                                                           aaGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGAATATGGACTGGAATTTAGCCATCTCAACCtggatg         <  2:190498/149‑1 (MQ=255)                                                                                                                              tcgcagcgCGGGGGTTTTGGGACCTTCATCCAGACGGGTAGCGGGAACGTTGCTGGCTGAGCCGGCACAAATAATGTTGTCGTCAACTTGCAATTAACCCTCCTGGTTAGAATATGGACTGGAATTTACCAATCTCAACCTGTATGGAc      <  2:359028/147‑1 (MQ=255)                                                                                                                                 cagcaCGCACGCATCCCGACCTGCAGACAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCACATGGCAAATAAACCTACGGGTTAGAATATAGACTCGGAGTTAGCCATCGCAACATGGATTGACATc   >  2:386708/1‑149 (MQ=255)                                                                                                                                  agcaCGGAGGTATTCGGATCTTCAGTCGGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACTTCCTGGTTAGAATATGGACTGGAATTTAGCCATCTCAACCTGGATGGACTTCa  <  1:254141/149‑1 (MQ=255)                                                                                                                                     |                                                                                                                                                  TTCATAAACGGTTCAGGTTCCGTTTCATAGGCCCAGTTGTAGCGTTTACCCTGTAGCGGGAATGCCAGGGCAGCGGGCATCTGGGTGCGGAAGTCAAAGCGATAGTCCGGGCCGCCCGCTTCAAGCAGCAGCACGGAGGTATTCGGATCTTCAGTCAGACGGGTAGCGAGAACGTTGCCGGCTGAGCCGGCACCAATAATGATGTAGTCAAATTGCAAATAAACCTCCTGGTTAGAATATGGACTGGAATTTAGCCATCTCAACCTGGATGGACTTCA  >  NC_000913/327030‑327307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.