| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,897,558 | G→A | 7.5% | A104V (GCC→GTC) | ygcS ← | putative MFS sugar transporter; membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,897,558 | 0 | G | A | 7.5% | 272.7 / 3.6 | 104 | A104V (GCC→GTC) | ygcS | putative MFS sugar transporter; membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (50/43); new base A (2/6); total (55/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TCCACACCACGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGATCATTCCCGCCAT > NC_000913/2897412‑2897706 | tCCACACCACGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAACTTTA‑AAACCTGAGTTTGAACCTACTGAATAATCGACTCCCAGACCAATGCCAATCAAAAGCCGCAGGCCAATAAGATTCACTGGCGtggtgggc > 1:794061/1‑147 (MQ=255) accccGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCaaaaaa < 1:113947/149‑1 (MQ=255) cacGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAAtt > 2:672029/1‑149 (MQ=255) acGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATCCACGCCGGCCAAACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTg < 1:346339/149‑1 (MQ=255) cGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAACCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGt < 1:1081722/149‑1 (MQ=255) gCTAAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAAGTCAGCCAGCAAGGTGTG‑ACCTACTGGATAATCGCCTCCCAGACCAATGCCCACAACAACAACCCGATCGGCAAGATGCTCTGGCGTGATGCAAAAAAATTGTa > 2:1732894/1‑149 (MQ=255) gcCCAGCAAAATACCGCGATGGCGGCGCGGGGCACATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAGAAATTGTAAAAACGaag > 2:835876/1‑149 (MQ=255) gcCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAACATTGTAAAAACGaag > 1:408568/1‑149 (MQ=255) ccAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGgagca > 2:162274/1‑149 (MQ=255) cAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGaagcaa > 1:1223906/1‑149 (MQ=255) aGCAAAATGCCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGAGCG‑ACCTACTGAATAATCGCCTCCCATACCAATGCCAATCAAAATGCGCAGTCCACTAAGATCCCCTGGCCGGGTTGCAAAAAATGGTGAAAACGaagcagg > 2:981020/1‑147 (MQ=255) gCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGTTGGCAAAAAATTGTAAAAACGaagcaagc > 1:109411/1‑149 (MQ=255) gCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGaagcaagc > 1:541310/1‑149 (MQ=255) aaaaTACCGCGATGGCGGCGCGGGGGAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCACTCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGaagcaagcat > 1:489353/1‑147 (MQ=255) aaaaTACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGt > 1:311914/1‑149 (MQ=255) aaaaTACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGt > 1:939845/1‑149 (MQ=255) aaaaTACCGCGATGGCGGCACGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGACAAGCAAAATGCGCAGTCCAAGTAGATGCTCAGGTGTGGTGACAAAAAAATGCAAAAACAaaacaagaga > 2:499491/1‑146 (MQ=255) aagaCCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAAGGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAACATTGTAAAAACGAAGCAAGCGTaa < 2:850755/146‑1 (MQ=255) tACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ATCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCATAAAATTGTAAAAACGAAGCAAGCGTAATc < 1:1274968/149‑1 (MQ=255) tACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAACATTGTAAAAACGAAGACAGCGTAATc > 2:1245674/1‑149 (MQ=255) aCCGCGATGGCGGCGCGGGGAAAGTGCAGCCAGCAAGGGGTG‑ACCTACTGAAGAATCGCCTCCCAGACCGATGCCAATCAAAAGGCGCTGTCCAATAAGATGCTCTGGGGTGGTGGCAAAAAATTTTTAAAACGAAGCAAGCGTAATCa < 2:490184/149‑1 (MQ=255) aCCGCGATGGCGGCGCGGGGAAAATTCATCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCa < 2:1728191/149‑1 (MQ=255) ccGCGATGGCGGCGGTGGGAAAATTCAGCCCGTAAGGGGTG‑ACCTACTGAAGAAGCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCATAGAAGAAAAAAATTGTAAAAACGAAGCAAGCGTAATCAg < 2:1250787/149‑1 (MQ=255) ccGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGAGGTGCCACAAAATTGTAAAAACGAAGCAAGCGGAATCAg > 2:1444657/1‑149 (MQ=255) cgcgATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGACCAAGAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAACCGCAATCAGc > 1:870305/1‑149 (MQ=255) tGGCGGCGCGGGGAAAATTCCGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCaaaaa < 2:1470726/149‑1 (MQ=255) ggcgCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAACTg > 2:1431533/1‑149 (MQ=255) gcgGAGAAAATTCAACAAGGCAGGGGGG‑ACCCACAGAATAATCGCCTCCCAGACCAATCCCCATCAAAATTCGCAGTCCAATTACTTGCTCTGAAAAAAAAAAAAAAAATTGTAAAAGCGAAGCAAGCGTAATCAGCAAAAAGCTGAAg < 2:1324332/149‑1 (MQ=255) cgGGAAATATGCAGCCAGCAAGGTGTG‑ACCTACTGACTAACCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAgg < 2:818940/149‑1 (MQ=255) gggAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAgggg > 1:153379/1‑147 (MQ=255) ggAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGa < 1:279571/149‑1 (MQ=255) cgAAAATAAAGCCAGAAAGGTATG‑ATCCGCAGAATAACCGGCCCCCAGCCCAATGCCAATGAAAATGCGCAGTCCAATAAGATGCTTTGAAAAAAAAAAAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGa < 2:1503078/148‑1 (MQ=255) gtgaaTTCCGCCGCCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGCCCGATGTCGATCCAGATGCGCAGCCCAATACCACGCGCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGaa < 2:489165/146‑1 (MQ=255) gagatttCAGCCAGCATGGTGTG‑GCCTACTGAAGAACCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCTTAAAGCTGAAGGTGaa < 2:667391/144‑1 (MQ=255) aaagacaggcagcAGGGGGGG‑ACCTACAGAATAAACGCCTCCCAGACGAGTGCCAATCAAAATGCGCAGGCGAGTTAGATGCTGTGACGAGGAGAAAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGa < 2:1467152/144‑1 (MQ=255) cagccagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGGAATCAGCAAAAAGCTGAAGGTGAAGAtttct > 2:626050/1‑147 (MQ=255) gccagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAATAACGAAGCAAGCGTAATCGGCCAAAAGCTGAAGGTGAAGATTTTTTg < 1:1014161/149‑1 (MQ=255) ccagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCGAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGCTTTTTTGc > 1:1178458/1‑149 (MQ=255) ccagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATGAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGGGAAGATTTTTTGc > 1:1093484/1‑149 (MQ=255) ccagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATCAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGc > 2:872211/1‑149 (MQ=255) ccagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGc < 1:405893/149‑1 (MQ=255) cagcAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTACTCAGCAAAAAGCTGAAGGTGAAGATTTTTTGcc > 1:649448/1‑149 (MQ=255) gcAAGGTGTG‑ACGTACGGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGACGCTCTGGAGAAAAAAAAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGa < 2:1293725/149‑1 (MQ=255) gggtg‑ACCTACTGACTAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAat < 2:1321115/147‑1 (MQ=255) tgtg‑ACCTACTGAATACTCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGACAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAata < 1:1402438/149‑1 (MQ=255) tgtg‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAata < 1:261326/149‑1 (MQ=255) tg‑ACCTACTGAATAATCGCCTCCCAGACCAGTGAGGTACAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATGAGCAAAAAGATGAAGGTGAAGATTTTTTGCGGACCAATATg > 2:1747150/1‑149 (MQ=255) tg‑ACCTACTGAATAATCGCCTCCCAGACCACTGACGCCCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATGGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGAGAAGATCATTTGCCGACCAatacg > 2:1747627/1‑147 (MQ=255) tg‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAGAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATg > 1:1400769/1‑149 (MQ=255) tg‑ACCTACTCAATCATCGCCCCCCAGAGCAAGGCCAAGCACAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTCTTTGCCGACCAATATg < 2:1367453/149‑1 (MQ=255) aCCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGt < 2:1035671/149‑1 (MQ=255) aCCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGt > 1:1362341/1‑149 (MQ=255) cTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCGAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATAAGGTCg > 1:797646/1‑149 (MQ=255) cTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCg > 2:1315675/1‑149 (MQ=255) cTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCg > 1:1038319/1‑149 (MQ=255) cTACTGAATAATCCCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCg < 2:297173/149‑1 (MQ=255) tACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTAGCCGACCAAGATGGTCgg > 1:1131450/1‑149 (MQ=255) aCTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGga < 1:1186452/149‑1 (MQ=255) aCTGAACAATCGCCTCCCAGAACAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGga < 1:733235/149‑1 (MQ=255) atCGCCTCCCAGACCAATGTCAATCAAAATGCGCCGTCCAATAAGATGCTCTGGTGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCGGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCAcc < 2:386328/149‑1 (MQ=255) tCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAACAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCAccc < 1:1565146/149‑1 (MQ=255) gcGCCTCCCAGACCAATGCCAAGCAAAATGCGCCGTCCAATGAGCTGCTCAGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCAccc < 1:141176/148‑1 (MQ=255) cGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATCGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATAGTCGGAGATCCACTCa > 2:1219255/1‑149 (MQ=255) gCCTCCCAGACCCATGGCAATCCAAATGCGCAGTCCAATAAGATGCTTTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCACGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCaa < 2:703842/149‑1 (MQ=255) ccTTCCAGACCAACGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAg < 1:1493835/149‑1 (MQ=255) cccAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAAc < 1:384257/149‑1 (MQ=255) ccAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCACAAAGCTGAAGGTGAAGA‑TTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCa < 1:957694/149‑1 (MQ=255) ccgagcAAGGCCAATCAAAAGGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGAAAAAAAAAAAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCa < 2:1623248/144‑1 (MQ=255) cAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCGCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCa < 1:313010/149‑1 (MQ=255) aGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAAcccg > 1:1081785/1‑147 (MQ=255) tggcaaacaaaATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCa > 2:311770/4‑149 (MQ=255) tGCCAATCAAAATGCGCAGCCCAATAAGATGCTCTGGCGTGGTGACAAAAAATTGTAAAAACCACGCCAGCGTCCTCAGCAAAAAGATGAAGGTGAAGATTTCTTGCCGACCAATATGGTCGGAGACACACCCAAGAACCAGGATGCCa > 2:316938/1‑149 (MQ=255) gCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAAATCGACGCAAGAACCAGCCTGcaag > 2:1575211/1‑146 (MQ=255) gCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGGGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCaa < 1:726602/149‑1 (MQ=255) gCCAATCAAAATGCGCAGTCCAATAAGATGCGCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCaa < 1:1487077/149‑1 (MQ=255) aaTCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGa > 2:1457331/1‑149 (MQ=255) aaTCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGa > 1:239271/1‑149 (MQ=255) aaTCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGa > 2:1417231/1‑149 (MQ=255) aTCAAAATGCGCAGTCCAATGAGACGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCACGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGaa < 2:1222860/149‑1 (MQ=255) aTCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGaa < 2:91699/149‑1 (MQ=255) tCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTCAAAACGAAGCAAGCGTAGTCAGCAAAGAGCTGAAGGTGAAGATGATTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGACAAGGGAc > 1:349406/1‑149 (MQ=255) tCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCGAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAAc > 1:1078924/1‑149 (MQ=255) aaaTGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATAGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACaaa > 1:1676939/1‑149 (MQ=255) tGCGCAGTCCAATCAGATGCCTTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCGAGCGTAATCAGCAAAAAGCCGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAACCCa < 1:1999/149‑1 (MQ=255) cgcAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAg < 1:9363/149‑1 (MQ=255) gTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAgc > 1:1648870/1‑149 (MQ=255) tCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTGGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGCACAAACCAAGGAgcg > 1:1256656/1‑149 (MQ=255) ccAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAgcgc < 1:302517/149‑1 (MQ=255) cAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGcc > 1:765296/1‑149 (MQ=255) aaTAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTTTCGTTTAATATGGTCGGAGATCCACCCAAGAACCAGGCTACCAAGGAACAAACAAAGGAGCGCCg > 2:1766454/1‑149 (MQ=255) tAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAg > 1:720893/1‑149 (MQ=255) aggccctGGCGTGGTGACAAAAAATGGTAAAAACGAAGCAAGAAAAAAAAAAAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAgccgc < 2:700126/144‑1 (MQ=255) aTGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTTCCAAGGAACAAACCAAGGAGCGCAGAgccgc > 1:179321/1‑149 (MQ=255) aTGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAgccgc < 2:715384/149‑1 (MQ=255) aTGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAgccgc > 1:1623209/1‑149 (MQ=255) ctctGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGa > 1:826256/1‑149 (MQ=255) gCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGATCAtt > 1:47775/1‑149 (MQ=255) ggCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGATCATTCCCGCCa > 2:1606755/1‑149 (MQ=255) gCAAAAAATTGTAAAACCGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGATCATTCCCGCCAt < 2:541310/149‑1 (MQ=255) gCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATACGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGATCATTCCCGCCAt > 1:969608/1‑149 (MQ=255) | TCCACACCACGCTGAATGCGCCCAGCAAAATACCGCGATGGCGGCGCGGGGAAAATTCAGCCAGCAAGGTGTG‑ACCTACTGAATAATCGCCTCCCAGACCAATGCCAATCAAAATGCGCAGTCCAATAAGATGCTCTGGCGTGGTGGCAAAAAATTGTAAAAACGAAGCAAGCGTAATCAGCAAAAAGCTGAAGGTGAAGATTTTTTGCCGACCAATATGGTCGGAGATCCACCCAAGAACCAGGCTGCCAAGGAACAAACCAAGGAGCGCCGAGCCGCCGATCATTCCCGCCAT > NC_000913/2897412‑2897706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |