| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,836,954 | G→A | 9.4% | M1M (ATG→ATA) † | setC → | putative arabinose efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,836,954 | 0 | G | A | 9.4% | 370.1 / 8.4 | 136 | M1M (ATG→ATA) † | setC | putative arabinose efflux transporter |
| Reads supporting (aligned to +/- strand): ref base G (56/64); new base A (3/11); total (59/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.09e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
ATAATCTCAATTGCTGGCCCTATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTCCTATAA > NC_000913/3836806‑3837102 | aatCTCAATTGCTGGCCCTATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCa < 2:916585/149‑1 (MQ=255) aatCTCAAATGCTGGCCCCAAAATATTGCGCTAGCATTACATTCTCGATGTATCAGCGATACTCAAAAATTCTTAACACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCa < 1:1524859/149‑1 (MQ=255) tctcAATTGCTGGCCCTATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTTTTTCGGTTTTTCAGAAGAATGCaaa > 2:1424378/1‑149 (MQ=255) tcAATTGCTGGCCCTATAATATTTCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCaaaaa > 2:1235828/1‑149 (MQ=255) tcAATTGCTGGCCCTATAATATTGCGCTCGCATTGCTTTCTGGTTGTATCGGCGATTCTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTCTTTGTAACTCAGGTATAGTTTTTCGCCCGGGGCTTCAGGAGAATGCaaaaa > 2:1187099/1‑149 (MQ=255) aaTTGCTGGCCCTATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAAc < 1:384474/149‑1 (MQ=255) aaTTGCTGGCCCTATAATATTGCGCTAGCATGGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAAc < 1:456949/149‑1 (MQ=255) ttGCCGGCCCCATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACgg < 1:590374/149‑1 (MQ=255) tGGCTCTTTAATATTGCGCTAGCATTGCTTTCTGGTTGTATCGGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTAc < 1:463986/149‑1 (MQ=255) tGGCCCTATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCAGGTGATTCAGAAGAATGCAAAAAACGGCTAc > 1:1599242/1‑149 (MQ=255) tcccTATTATATTGCGCTAGCATTGCTTTCTAAAAATAACAACGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCACTTATAGTTTTTCGCCCGGTGATTAAAAAAAAAAAAAAAAACGGCTACCa < 2:1655936/148‑1 (MQ=255) cTATACTATTGCGCGAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTc < 1:773165/149‑1 (MQ=255) cTAGAATATTGCGCTAGAATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCCCTc < 2:161845/149‑1 (MQ=255) ataataTTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCCGAAGAATACAAAAAACGCCTACCACTCCa > 2:181600/1‑149 (MQ=255) ataataTTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCa > 2:722744/1‑149 (MQ=255) aataTCGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAAAATGCAAAAAACGGCTACCACTCCATc < 2:280671/149‑1 (MQ=255) tatTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTAATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTAGCCCGGTGATTCAGAAGAATACAAAAAACGGCTACCACTCCATCaa > 1:1098523/1‑149 (MQ=255) atTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGACTGCAAAAAACGGCTACCACTCCATCaaa < 1:965985/149‑1 (MQ=255) ttGCGCTAGCATTGCTTTCTGGATGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCaaaa > 2:1295548/1‑149 (MQ=255) tGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCGGAAGAATGCAAAAAACGGCTACCACTCCATCaaaaa > 1:1234310/1‑149 (MQ=255) tGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCaaaaa < 1:624629/149‑1 (MQ=255) gcTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATAc > 1:1195522/1‑149 (MQ=255) tagaactGCTTTCTGTCTGTCTCAACGATACTCAAAAATTCGTCATACCATAATTAGTAGACTGGTAATTATTTGTATTTGAGTTATATTTTTTTGTCCGGGTATAAAAAAGTAATTAAAAAACGGCTACCACTCCATCAAAAATACtt < 2:838049/143‑1 (MQ=255) caattcTTTCTGGTTGTATCAGCAAAACTAAAAAATTCTTAATAAAATACTCATTCGATTGGTACTTATTTGTTGCTACGTTCGGCAGAGCCGCCCTCTGTTTTGAAAAAAAAAAAAAAACGGCTACCACTCCATCAAAAATACTTGAt < 2:1739451/144‑1 (MQ=255) aTTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGAATGATACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGAtc < 2:12201/149‑1 (MQ=255) aTTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACGCTTTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCCCTCCATCAAAAATACTTGAtc > 1:1417729/1‑149 (MQ=255) aTTCCTTTCCGGTTGTATCAGCGATACTCAAAAATTCTTAATAAAATACCAATCCGCCCGCCACTTATTTGTAAGTCAGCTATATTTTTTCGCCCGGTGATTAAAAAAAAAAAAAAAAACGGCTACCACTCCATCAAAAATACTTGAtc < 2:1574710/149‑1 (MQ=255) tGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGAtctc > 1:32045/1‑149 (MQ=255) tttCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTTTTTTTTTTTTTCAGAAGAATGCGATAAACGTCTACAACTCCATCAATAATACTTGAtcttgct > 2:277102/1‑145 (MQ=255) tGGATGTAACAGCTATACTCAAAAAGTCTTAAGAAAAGACTCATGCGACGAGTACTTATTTGTAACTCACTTATATTTTTTCGCCCGGTGATTAAAAAAAAAAAAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCcg < 2:694215/149‑1 (MQ=255) ggTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCcgc < 1:616130/149‑1 (MQ=255) gTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTGCGAAGCATGCAAAAAACGGCTACCACTCCATCACCAATACTTGATATCACttgagcg > 2:1442327/1‑143 (MQ=255) ttGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTTTCTTTGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCCCACTGCCGCgg > 2:133781/1‑149 (MQ=255) tGTCTCAGCGATACTCAAAAAGTCTTAATACAATACTCATTCGACTAGTCCTTATTTGTAGCTCAGTTATATTTTTTCGCCCGGTGATTCAAAAAAAAAAAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGc < 2:1064756/149‑1 (MQ=255) tCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCAttt > 1:453805/1‑149 (MQ=255) cAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCAtttt < 2:1725502/149‑1 (MQ=255) aGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCCGAAGAACACAAAAAGCGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCAttttt > 1:864643/1‑149 (MQ=255) gCGATCCTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTAAAAAAAAAAAAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTa < 2:1419670/149‑1 (MQ=255) gCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTa < 1:546195/149‑1 (MQ=255) cGACACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTAc < 1:967635/149‑1 (MQ=255) aaTACTCAAAAATTCTTAGTACAGTACTTTTTCGACTGGTAGTTATTTGTAACTCAGTTATCTTTTTTCGCCCGGTGATTCAGAAGAATGCAATTATCGGCTAAAAAAAAAAAAAAAATACTTGATCTCACTGCCGCGGCATTTTTACt < 2:809669/148‑1 (MQ=255) aCTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGt < 1:819851/149‑1 (MQ=255) aCTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGt > 1:131984/1‑149 (MQ=255) cTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTc < 2:116676/149‑1 (MQ=255) cTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTc < 1:1670752/149‑1 (MQ=255) tCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCg > 2:918522/1‑149 (MQ=255) tCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCg > 2:997662/1‑149 (MQ=255) tCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCg > 1:1526613/1‑149 (MQ=255) cAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGTATTTTTACTTGTCGc < 1:722744/149‑1 (MQ=255) aaaaaTTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGcc > 1:1516114/1‑149 (MQ=255) aaaaTTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACACCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCt > 1:93376/1‑149 (MQ=255) aaaTTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCGTCAAAAATACTTGATCTCCCTGCCGCGGCATTTTTACTTGTCGCCtt < 1:1014171/149‑1 (MQ=255) aaTTCTTAATACAATCCTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCttt < 2:922355/149‑1 (MQ=255) ctttatcatacagtacTCATTCGACCGTTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTc < 1:1768493/142‑1 (MQ=255) aatacaatacTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTTTCGCCTTTCTGACgg > 2:199989/1‑149 (MQ=255) aatacaatacTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACgg > 1:81874/1‑149 (MQ=255) tacaatgcTCATCCGACTGGTACTTATTTGTACCTCCGTTACTTTTTGTCTCCCGGTAATACAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGt < 2:1541290/149‑1 (MQ=255) acaatacTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTa < 1:1767182/149‑1 (MQ=255) atacTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTg > 1:1023025/1‑149 (MQ=255) cgtCAGTCGACTGGTACTTATTTGGAACTCAGTTATATTTTGTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTTCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCg < 2:1147192/147‑1 (MQ=255) cgcATTCGACTTGTACTTATTTGTAACTCAGTGATATTTTTACGCCCGGTGAATCAAAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCgg < 2:778586/147‑1 (MQ=255) tCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTCTTGCggg > 1:1662730/1‑149 (MQ=255) ccATTCGACTGGTACTTATTTCTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTCCCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCggg < 1:537616/148‑1 (MQ=255) aTTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGgcg < 1:271983/149‑1 (MQ=255) gACTGGTACTTATTTGTAACCCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGctct < 1:303736/149‑1 (MQ=255) tGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCa < 1:509997/149‑1 (MQ=255) tACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCCGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTTTCGCCTGTCTGACGGGGATAGCAGGCGCGCTTCAGAc > 2:1198766/1‑149 (MQ=255) tACTTATTTGTAACTCAGTCATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGTGACATTTATTTTTGTCGCCTTTCTTGCTGGTATTGCGGGCGCTCTTCAGAc > 1:1312753/1‑149 (MQ=255) ctcttttGTAACGCAGTTAGAGTTCTTCGCCCGGTGATTAAGAAGAATGCAAAAAACGGCTACCACTCCCTCAAAACTACTTGATCTCACTGCCGCGGCAGTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGCCGCTCTTCAGACTc < 2:70365/145‑1 (MQ=255) ttATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGGGCTCTTCAGACTcc > 1:600549/1‑149 (MQ=255) ttATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTAATTGTCGGCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTcc > 1:1230352/1‑149 (MQ=255) tttGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTAc < 1:968429/149‑1 (MQ=255) ttGTAAGTCAGTTATATTTTTTCGCCCGGTGTTTGAAAAAAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTAcc < 2:266658/149‑1 (MQ=255) ttGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTAcc < 1:1766869/149‑1 (MQ=255) aaCTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCCCTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTaa < 1:1356572/149‑1 (MQ=255) aaCTCAGTTATATTCTTTCGCCCGGTCACTCAGAAGAATGCAAAAAACGGATACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTaa < 1:622465/149‑1 (MQ=255) tCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGta > 1:820453/1‑149 (MQ=255) tCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGAATCCTACCCTAAGta > 2:417100/1‑149 (MQ=255) ttATATTTTTTCGCCCGGTGATTCAGCAGCATGCAATAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGCCGGGTATTGCGGCCGCGCTGCCGACTCCTCCCACAAGtgtctt > 2:837663/1‑144 (MQ=255) tttgtccGCCCGGGGATTCAAAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTCTCGCCTTTCTGACGGGTATTGCGGGCGCTCGTCAGACTCCTACCCTAAGTATATTCCTCg < 2:1288916/143‑1 (MQ=255) ttttCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCCGACTCCTACCCTAAGTCTATTCCTCGCa > 1:261835/1‑149 (MQ=255) tttCGCCCGGTGATTCAGAAGAATGCACAAAACGGCTACCACACCATCAAAGATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAg < 2:1645116/149‑1 (MQ=255) cccGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGaa < 1:722058/149‑1 (MQ=255) cccGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACGGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATTaa > 1:800158/1‑149 (MQ=255) cccGGTGACTCAGAAAAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGaa < 1:1616929/149‑1 (MQ=255) ccGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAAc < 2:174702/149‑1 (MQ=255) ccGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAAc < 1:1424378/149‑1 (MQ=255) cGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGCTGAACt > 2:928058/1‑149 (MQ=255) cGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACt > 2:1797894/1‑149 (MQ=255) cGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTCCTGACGGGTGTTGCGGGCGCTCTTCAGACTCCTGCCCTAAGTAGATTCCTCGCAGATGAACt > 2:1368113/1‑149 (MQ=255) gTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAAGTGa > 1:1641523/1‑149 (MQ=255) gTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATAAAAGAGAGGTGATCCCACTGAGGGGGCGGTATTACGGGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGa > 2:1740781/1‑149 (MQ=255) agtCAGAAGAATGAAAAAAACGGCTACCACTCCATGAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAg < 2:417803/147‑1 (MQ=255) tCAGAAGAATCCAAAAAACGCCTACCACTCCACCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCCCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGcc < 2:1234310/149‑1 (MQ=255) gacgaaTGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGATCTGAAAGCCCGt < 2:668397/146‑1 (MQ=255) aagaaTGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTc < 1:406367/149‑1 (MQ=255) aagaaTGCAAAAAACGGCTACCACCCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTc < 1:33031/149‑1 (MQ=255) aaTGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTCCta < 1:709687/149‑1 (MQ=255) aTGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCCCTGCCGCGGCAGTTTTACTTGTCGACTTTCTGACGGGTCTTGCGGGCGCTCTTCAGACTCCTACCCTACGTATCTTCCTCGCCGAGGAACTGAAAGCCCGTCCtat > 2:227011/1‑149 (MQ=255) tGCAAAAAACGGCTACCACTCCATCACCACTATTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTCCtata > 2:1290530/1‑149 (MQ=255) | ATAATCTCAATTGCTGGCCCTATAATATTGCGCTAGCATTGCTTTCTGGTTGTATCAGCGATACTCAAAAATTCTTAATACAATACTCATTCGACTGGTACTTATTTGTAACTCAGTTATATTTTTTCGCCCGGTGATTCAGAAGAATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTCCTATAA > NC_000913/3836806‑3837102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |