New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1207790 = | 58 (0.880) | 7 (0.120) | 6/262 | 8.1 | 11.5% | coding (290/630 nt) | stfP | e14 prophage; uncharacterized protein |
? | NC_000913 | 1209619 = | 56 (0.960) | pseudogene (1/501 nt) | stfE | pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGA > NC_000913/1209474‑1209767 | tttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGTAACCGGGACACCAACAGCTAATGCAGAGCCGTCTCGCAA‑ACCAACCtt > 1:227793/1‑149 (MQ=255) gTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTAt < 1:436785/149‑1 (MQ=255) tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCACCCAGCCTGTTTGCTGATTGGCTGATGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTATGCCAAGACCAA‑GTTTATg > 1:20632/1‑149 (MQ=255) ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑AGCAACGTTTATGaa > 2:546542/1‑149 (MQ=255) gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGaaa < 1:907795/149‑1 (MQ=255) aaaGCCTTGGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGACAAt < 2:156470/148‑1 (MQ=255) aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATga < 1:1043967/149‑1 (MQ=255) gCCTTTGCCAGTTCCGGGCATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATgaa < 1:451346/149‑1 (MQ=255) gCCTTCGCCAGTTGCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATgaa > 2:642017/1‑149 (MQ=255) ttGCCAGTTCCGGGGATTCGTCAGCAGAAAAAGCGGCACCATTACATTTCATCCAGCCTGTTAGCGGAGTGGATGAAGGCCACGGAACCGGGACACCAAAAGGTAATGCAGAGGCTTCTACCAA‑AACAAGGATTAAGGAAAAGAAGcaa > 2:137291/1‑149 (MQ=255) cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCTA‑CCCGTCGTTTATGAAAATGAAGAAATAAc < 2:1054068/149‑1 (MQ=255) cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCGA‑ACCAACGTTTATGAAAATGAAGACATAAc > 1:818343/1‑149 (MQ=255) gTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACaa < 1:1068567/149‑1 (MQ=255) ggTATTCGTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt < 1:454866/149‑1 (MQ=255) cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc < 2:578027/149‑1 (MQ=255) cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc < 2:1091597/149‑1 (MQ=255) ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCTA‑ACCAACGTTTATGAAAATGAAGAAATACCCAGCACTAGGcatca > 1:899304/1‑149 (MQ=255) tcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAC‑ACCAACGTTTATGAAAATGAAGAGATAACAAACAAATGGcatcaa > 1:307699/1‑148 (MQ=255) agcagAAAAAGCGGCACCATTGCATTCCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGATATAACAAGCAAATGGCATCATTc < 2:1056700/149‑1 (MQ=255) agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg > 1:517154/1‑149 (MQ=255) aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa > 1:703226/1‑149 (MQ=255) cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg < 2:917551/149‑1 (MQ=255) aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg > 1:659809/1‑149 (MQ=255) cATTGAATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTGATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACGAGCAAATGGCATCATTCCTGCTTTTAcccagagg > 2:765836/1‑143 (MQ=255) gCATTTCAGCCAGCGTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAttt < 1:250721/149‑1 (MQ=255) cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa > 2:153130/1‑149 (MQ=255) agttCAGCCAGCCTGTGGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa < 2:899304/147‑1 (MQ=255) cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg > 1:881502/1‑149 (MQ=255) agccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc > 1:871761/1‑149 (MQ=255) ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAC‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCtt > 2:1060858/1‑149 (MQ=255) agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAt < 2:1005315/149‑1 (MQ=255) agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAt < 2:517154/149‑1 (MQ=255) gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGACGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAGATGattatt > 2:785012/1‑149 (MQ=255) ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCGTCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg < 1:660205/149‑1 (MQ=255) ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg > 1:462286/1‑149 (MQ=255) tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGTGGTATTTAACATGCTTATTGGCTAt < 1:263423/149‑1 (MQ=255) tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAACGCAGAGGCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAt < 1:146044/149‑1 (MQ=255) ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGATTATCATCTATGTAc > 2:978986/1‑149 (MQ=255) gtgtcgtaaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg < 2:223367/142‑1 (MQ=255) tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTGATTGGCTATGTACGCGt > 2:438149/1‑149 (MQ=255) gCCACGGAACCGGGACACCAACAGGAAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa < 2:833105/149‑1 (MQ=255) ccACGGAACCGGGACACCAACAGGTGATCCAGAGCCTTCTCCCAA‑ACGAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGATTTTACCAGGGGGATTTGACATGCTAATTGGCTATGTACTCGTAACAAAAAAt > 1:613754/1‑149 (MQ=255) cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCCA‑ACCACCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCGATGTACGCGTATCAACaaagg > 1:436087/1‑147 (MQ=255) aCGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa < 1:905452/149‑1 (MQ=255) aCGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa < 1:381240/149‑1 (MQ=255) ccGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAGTGGCATCATTCCTGCTTTTACCAGAGGGATTTAACATGCTTATTGGCTATGTACGCGTATATACAAATGACCAGaa > 1:766833/1‑149 (MQ=255) ccGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa > 2:919071/1‑149 (MQ=255) cGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTACCAACAAATAACCAGacc > 1:510185/1‑147 (MQ=255) ggACACTAACAGGTAGTGCAGAGCCTTCTCGCCA‑ACCATCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATAATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAATAAATGACCAGAacac < 2:20632/149‑1 (MQ=255) cAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt > 1:893877/1‑149 (MQ=255) cAACAGGTAATGCAGAGCATTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACCAGCAAATGGCGTCATGCCTGCTTTTACCAGGGGGAATTAACATGCTTATTGGCTATGTACGCGTATGAACAGATGACCAGAACACAGATCt > 2:828983/1‑149 (MQ=255) aaCAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTa < 1:642017/149‑1 (MQ=255) aCAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATCTACGCGTATACACAAATGACCGGAGCACAGagcagc > 2:1027276/1‑144 (MQ=255) cAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAGGTACGCGTATCAACAAATGACCAGCGCACAGATCTCCAACGTAATgc > 1:413208/1‑149 (MQ=255) agagCCTTCTCCCAA‑ACCACCGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcg < 2:896760/149‑1 (MQ=255) agagCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCAGCTTTTAAAAGGGGGATTTAACATGCTTATTAGCTATGTACTCGTATCAACGAATGCCCAGAACTCAGATCTACTGCGTAATgcg > 2:1022397/1‑149 (MQ=255) cTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa < 2:411593/149‑1 (MQ=255) ctcCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTCCCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAGCATAGATCTGCAACGTAATGCGCTGAACtg > 1:305703/1‑149 (MQ=255) tcCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgt > 2:791981/1‑149 (MQ=255) cccAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg > 2:594869/1‑149 (MQ=255) cAA‑CCCAACGTATATGAAAATGAAGAAATAACGAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa < 2:613754/149‑1 (MQ=255) cAA‑ACCGCCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATGATGCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa < 2:299441/149‑1 (MQ=255) aCCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCCTCATTCCTGCCTTTACCAGGGGTATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGa < 2:818343/149‑1 (MQ=255) cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGa < 2:703226/149‑1 (MQ=255) cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGa < 1:330308/149‑1 (MQ=255) | TTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAA‑ACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGA > NC_000913/1209474‑1209767 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |