New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293197 =9 (0.220)28 (0.690)
+G
24/274 NT 75.8% intergenic (‑275/‑330) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 2101749 = NA (NA)intergenic (‑5/+146) wbbL/insH1 pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator

TCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCA  >  NC_000913/1293055‑1293345
                                                                                                                                              |                                                                                                                                                    
tCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaa                                                                                                                                                <  1:151111‑M1/149‑5 (MQ=255)
tCAGAAAATCAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaa                                                                                                                                                <  1:418277‑M1/149‑5 (MQ=255)
  aTAAAATTAGCCAGAAAAGACGCGGCATAAAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGGTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGATGACGACATTTCAGTCTTATGTATTAGggaagg                                                                                                                                              >  1:447448‑M1/1‑143 (MQ=255)
   tAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggt                                                                                                                                             <  1:362627‑M1/149‑8 (MQ=255)
     aaaTTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTa                                                                                                                                           <  1:431114/149‑1 (MQ=255)
               aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTcc                                                                                                                                 <  2:277807‑M1/22‑1 (MQ=255)
               aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaaaatgaagaaatgaaatgactgagacagccgagaagaatgtccccgcctattcgcaccttcccTAGTTGTGCTTCAGAGACTtca                                                                                                                                 <  2:437890‑M1/22‑2 (MQ=255)
                    cgaagaaacggtctaactaggttgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattcccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTAtt                                                                                                                            >  2:675826‑M1/123‑149 (MQ=255)
                     gaagaaacggtctaaataggcaaattcaaggcatatagccgataaaaactcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTa                                                                                                                           <  2:307601‑M1/28‑1 (MQ=255)
                      gagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTaa                                                                                                                          >  1:581073‑M1/121‑149 (MQ=255)
                        gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTattacgc                                                                                                                        <  2:686007‑M1/31‑4 (MQ=255)
                           gcggtctaaataggctgattcaaggcatttacgggagaaaaaatcggcgcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGaa                                                                                                                     >  2:589387‑M1/116‑149 (MQ=255)
                              ataGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATGCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTACCTATTAAGCGAatga                                                                                                                  <  1:462076/149‑1 (MQ=255)
                                aGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATATCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTTTATTAAggaaggtgcgaaaaactccctgatatgagatcatgt                                                                                                                >  2:351634‑M1/1‑113 (MQ=255)
                                  ccccATTAACACCTCTTATTTCGCAGCACGAGACGTTAAAACCTCCTGATTCCTGTCACATTTTATGGGGAGATGATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                              <  2:553876‑M1/149‑39 (MQ=255)
                                        ttACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGCCCTTCCAGTCTTATGTGCAATggtatgtgcgatcaagtccctgatatgaggtcatgtttgtcatc                                                                                                        >  2:516697‑M1/1‑105 (MQ=255)
                                          ttattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGaa                                                                                                      >  2:248837‑M1/101‑149 (MQ=255)
                                          acacCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                      <  1:396118‑M1/149‑47 (MQ=255)
                                          acacCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAAGACACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                                                                      <  1:57654‑M1/149‑47 (MQ=255)
                                               caaggcatttacgggagaaaaaatcggctcaaacatcaggaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAAGGATGAAAAGTAGAACAGTc                                                                                                 <  2:158430‑M1/54‑1 (MQ=255)
                                                atgatTCCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                <  2:608166‑M1/149‑53 (MQ=255)
                                                 tgatTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                               <  1:556808‑M1/149‑54 (MQ=255)
                                                   atTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGAGTATCGAAGGCTGGCGATCTTTCAGTCTTCCGTAGTAGTAGTGCTGAAGAGGATTCCATATTAAGCGAATGATGAAAAGTAGAACacgagcac                                                                                             >  2:480025/1‑142 (MQ=255)
                                                       cGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                         >  1:522616‑M1/1‑90 (MQ=255)
                                                         cagcaCGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAAAAGTCGCAATAagag                                                                                       >  2:35957/1‑149 (MQ=255)
                                                         acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAagag                                                                                       <  1:120123‑M1/64‑1 (MQ=255)
                                                          agcaAGTGAGGTTAAAACTTCCTGATTCAGGTCACCTTTTATGGGGAGCTTCTCGTAAGCGGGCGACCATTGAGTCATCCGTCTTAGTTGCGTGTACGGGAATTCCCTATCAAGCGCAGGAGGAAACGTAGCACCGTCGGaaacaggag                                                                                      >  2:293626/1‑142 (MQ=255)
                                                              agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATgg                                                                                  <  1:327223‑M1/69‑1 (MQ=255)
                                                               gaaaaaatcgcctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGa                                                                                 >  2:212922‑M1/80‑149 (MQ=255)
                                                                aaaaaatcggcccaaacatgaagaaatgaaatgactgagccagccgagaagaatttccccgcttattcgcaccttcccTAGGTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGAc                                                                                >  1:22425‑M1/79‑149 (MQ=255)
                                                                 gAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatca                                                                               >  1:285745‑M1/1‑80 (MQ=255)
                                                                   ggTTAAAACTTCCTGATTCCTGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                             <  1:538572‑M1/149‑72 (MQ=255)
                                                                    gTTAAAACTTCCTGATTCATGTCACATTGTATGGGGGAATTATCGTAGGCGGACGACCTTTCAGTCTTCTGTATCAGggaaggtgcgaacaagtccctgatacgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  2:71838‑M1/149‑73 (MQ=255)
                                                                    gTTAAAACTTCCTGATTCATCTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                            <  1:213816‑M1/149‑73 (MQ=255)
                                                                     ttAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                                                                           >  1:275157‑M1/1‑76 (MQ=255)
                                                                     ttAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTAATAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                                                                           >  2:441232‑M1/1‑76 (MQ=255)
                                                                           tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCa                                                                     >  2:597552‑M1/68‑149 (MQ=255)
                                                                             tCCTGATTCATGCCACATTTTAGAGGGAGATTATCGTAGGCTGACCACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaattccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                   <  2:328723‑M1/149‑82 (MQ=255)
                                                                             aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACt                                                                   >  1:89515‑M1/66‑149 (MQ=255)
                                                                                tGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTAtc                                                                >  2:145805/1‑149 (MQ=255)
                                                                                  tgaagaaatgaaatgactgagtcagccgagaagtatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTAtctc                                                              >  1:604692‑M1/61‑149 (MQ=255)
                                                                                     cATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                           <  1:295258‑M1/149‑90 (MQ=255)
                                                                                       tGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                         <  1:8805‑M1/149‑92 (MQ=255)
                                                                                        gTCACATTTTATGGGGAGATTATCGTCGGCTGACGACCGTTCAGTTCTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc                                                        <  2:188880‑M1/149‑93 (MQ=255)
                                                                                         atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAgg                                                       >  2:259410‑M1/54‑149 (MQ=255)
                                                                                            caTTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                    <  1:3890‑M1/149‑97 (MQ=255)
                                                                                                  ctgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTTGAGGTCAACagag                                              >  2:87418‑M1/45‑149 (MQ=255)
                                                                                                  ctgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACagag                                              >  1:707167‑M1/45‑149 (MQ=255)
                                                                                                   tgagtcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAGGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATATCCTGGAGGTcaacaaaag                                             <  1:492315‑M1/106‑5 (MQ=255)
                                                                                                   tgagtcagccgagaagaatttccccgcttattcgcaccttcccTACTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAgg                                             <  1:508297‑M1/106‑1 (MQ=255)
                                                                                                       tcagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTa                                         >  2:510431‑M1/40‑149 (MQ=255)
                                                                                                       gagaTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                         >  1:714724‑M1/1‑42 (MQ=255)
                                                                                                        cagccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTAt                                        <  1:643793‑M1/111‑1 (MQ=255)
                                                                                                          gccgagaagaatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTa                                      <  1:69031‑M1/113‑1 (MQ=255)
                                                                                                          aTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattcagcagt                                      >  1:103013‑M1/1‑39 (MQ=255)
                                                                                                                 tAGGCGGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTgcgc                               <  1:339603/149‑1 (MQ=255)
                                                                                                                  gaatttccccgcttattagcaccttcccTAGTTGTGTTTACGAGAATTCCCTCTTAAGCGAATGCTGCAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAAGGCTATTACTTGCGCa                              <  2:48872‑M1/121‑1 (MQ=255)
                                                                                                                   aatttccccgcttattcgcaccttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGGCAAGAGAGGGCGGTTGCTTGCGcac                             <  2:526911‑M1/122‑2 (MQ=255)
                                                                                                                            ccTTTCAGTCTTCGGTATTAGTTGTGGTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTTCGGGGGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTaaa                    >  2:515215/1‑149 (MQ=255)
                                                                                                                              tttCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                  >  1:160497‑M1/1‑19 (MQ=255)
                                                                                                                                     cttctGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCCACAGGTTAAAGATTGTGaa           <  2:270476/149‑1 (MQ=255)
                                                                                                                                      ttctGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagagccgtcagaccagaaaagagattt          >  2:731124‑M1/1‑11 (MQ=255)
                                                                                                                                      ttctGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggattcatcatgagtcatcaacttaccttagccgacagtgaattcagcagtaagcgccgtcagaccagaacagagattt          >  2:500854‑M1/1‑11 (MQ=255)
                                                                                                                                      accttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAAt          >  1:277807‑M1/9‑149 (MQ=255)
                                                                                                                                      accttcccTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTCGCGCAACAGGTTAAAGATTGTGAAt          >  1:437890‑M1/9‑149 (MQ=255)
                                                                                                                                            aTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtccgaccagaaaagagcctttcttag    >  2:580367‑M1/1‑5 (MQ=255)
                                                                                                                                              tAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAACAAAAGCGTGAGCGTAGTATTACACTAGGTTCCGGATTTAACCGTAATTCTAGTACGTGTGCAACAGGTTAAAGATGGTGAATacataaca  >  2:700545/1‑142 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
TCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCA  >  NC_000913/1293055‑1293345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.