New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22006495 (1.160)5 (0.060) 5/280 11.9 5.4% intergenic (‑69/+49) rcsF/metQ putative outer membrane protein/DL‑methionine transporter subunit
?NC_000913 = 220068 85 (1.090)intergenic (‑73/+45) rcsF/metQ putative outer membrane protein/DL‑methionine transporter subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTTGAACGGGTTCGACAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/219910‑220064
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgggcGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGTCGAA  <  NC_000913/220068‑219921
                                                                                                                                                                                                                                                                                                               
tTTTGAACGCGTTCGACAGGGGATCTGCCTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAG                                                                                                                                                            <  2:928429/148‑1
  TTGAACGGGTTCGACAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGAC                                                                                                                                                          <  2:1192458/149‑1
  TTGAACGGGTTCGACAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGAC                                                                                                                                                          >  2:674884/1‑149
    GAACGGGTTCGACAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGG                                                                                                                                                        <  2:332120/149‑1
              GACAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGGGCGCTTGCCC                                                                                                                                              >  1:540527/1‑149
                CAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGGGCGCTTGCCCGT                                                                                                                                            <  2:275937/149‑1
                                             CTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAGGACGGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAA                                                                                                               <  2:118151/149‑1
                                                  CATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTG                                                                                                          <  2:540527/149‑1
                                                                       CGGCAAAGCACGCACAGTATCTCCCCAATGTAGGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAG                                                                                     <  1:625955/149‑1
                                                                                                                                                    GACGGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCT        <  1:1305807/149‑1
                                                                                                                                                     ACGGGCGCTTAACCGTTATGGCTTTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTG       >  2:836251/1‑149
                                                                                                                                                      CGGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGT      >  1:168134/1‑149
                                                                                                                                                      CGGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCATGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGT      <  1:552201/149‑1
                                                                                                                                                       GGGCGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGGGGCTGTTCCATGTTAAGCAGATCCCCTGTC     >  2:493830/1‑149
                                                                                                                                                          CGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGTCGAA  <  1:371627/149‑1
                                                                                                                                                                                                                                                                                                               
CTTTGAACGGGTTCGACAGGGGATCTGCTTAACATGGAACAGCCGCTTAGCATGAGTGCTACTAAACAGATCGGTAAAGCACGCATAGTATTTCCTCAATGTATGATCAAAACGTCAATATTGAATCAGGAGCTTGTAAAAATGACAAGACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/219910‑220064
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgggcGCTTGCCCGTCTTGTCATTTTTACAAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGTCGAA  <  NC_000913/220068‑219921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.