| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,187,597 | C→T | P750L (CCG→CTG) | rpoC → | RNA polymerase, beta prime subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,187,597 | 0 | C | T | 97.8% | 292.6 / ‑4.1 | 92 | P750L (CCG→CTG) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (48/41); minor base G (0/2); total (48/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTC > NC_000913/4187451‑4187740 | gCAAACTGAAACCGTGATTAACCGTCACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTgg > 1:811385/1‑149 (MQ=255) aaCTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATg < 1:188994/149‑1 (MQ=255) aCTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATgg < 2:800517/149‑1 (MQ=255) aaCCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCGGGATGGCTCca < 1:557292/149‑1 (MQ=255) aCCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCcat < 1:1028706/149‑1 (MQ=255) aCCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCcat > 2:513251/1‑149 (MQ=255) ccGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCcatc > 1:857692/1‑149 (MQ=255) gTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCcatcat < 2:134618/149‑1 (MQ=255) tGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCatcatc < 2:1280993/149‑1 (MQ=255) aTTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGa > 1:1300635/1‑149 (MQ=255) ccGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCACCAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCCCAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGGTGGCTCCATCATCGAAACGc > 2:869050/1‑149 (MQ=255) gTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCa > 1:845745/1‑149 (MQ=255) gTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCa < 1:166659/149‑1 (MQ=255) tCAGGAAGAGAAGCAGGTTTCCTTCAACAGCACCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACcg < 2:1048965/149‑1 (MQ=255) aGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGTGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACcgcg < 2:731992/149‑1 (MQ=255) aGGAAGAGAAGCAGGTTTCCTTCAACAACATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCATGGTCTGATGGCGAAGCTGGATGGCTCCATCACCGAAACACCACTCCCcccg > 2:180157/1‑149 (MQ=255) gAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGTGCTGATGGCGAAGCTGGATGGCTCCATCATCGACACGCCAATCACCGCGaa > 1:451328/1‑149 (MQ=255) gAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGaa > 1:1094952/1‑149 (MQ=255) agagAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGGACt > 2:180359/1‑149 (MQ=255) aaccacgCAAGTTTCCTTCAACAGCATCTACATGATCGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAACCGGCAATCGCCGCCAAcc > 2:904162/7‑148 (MQ=255) agaAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTc < 2:837608/149‑1 (MQ=255) ggTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCTAACTTCCGTGAAg < 1:926335/149‑1 (MQ=255) gTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAg < 1:1327682/148‑1 (MQ=255) gTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAg > 2:1327682/1‑148 (MQ=255) tCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAGGGTCt > 1:1096153/1‑149 (MQ=255) tCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGACGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCt < 1:388606/149‑1 (MQ=255) ccTTCAACAGCATCTACAGGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATCCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTg < 1:470003/149‑1 (MQ=255) tCAACCCCATCTACGTGCTGGCCGCCCCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCtttgg < 2:508660/149‑5 (MQ=255) tCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAAc < 1:492801/149‑1 (MQ=255) aCAGCCTCTACAGGATGGCCGTCTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTa < 2:376677/149‑1 (MQ=255) cAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGACACGCCAATCACCGGGAACTTCGGTGAAGGTCTGAACGTAc > 1:707727/1‑149 (MQ=255) cAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTAc > 1:1044257/1‑149 (MQ=255) gCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTc < 2:731159/149‑1 (MQ=255) gCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGCCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTc < 1:823118/149‑1 (MQ=255) aCATGATGGCCGACTCCGGTTCGCGTGGTTCTGCGGCACAGATTCGTCAACTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCTAACTTCCGTGAAGGCGGGTACGTACGCCAGTag > 2:26508/1‑148 (MQ=255) aCATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGTACTTCCGGGAAGGGCTGAACGTACTCCAGTAc > 2:762876/1‑149 (MQ=255) cATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACt > 2:1332293/1‑149 (MQ=255) tgatgGCCGACTCCGGTGCGCGTGGTTCTGCGGCAGAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTc > 2:819312/1‑149 (MQ=255) tgGCCGACTCCGGTGCGCGTGGTTCTGCGGACCATTTGCTGTAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCAtc > 1:665018/1‑149 (MQ=255) ccGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTcc > 2:529803/1‑149 (MQ=255) ccGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCAGCATCGGAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGTACGTACTCCAGTACTTCATcccc > 1:524224/1‑149 (MQ=255) gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTccac < 2:386429/149‑1 (MQ=255) gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTccac < 2:1094952/149‑1 (MQ=255) gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTccac < 1:867544/149‑1 (MQ=255) gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTATGAACGTACTCCAGTACTTGATCTccac > 1:367443/1‑149 (MQ=255) cgccGGTGCGCGGGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTccaccc < 1:1238613/147‑1 (MQ=255) tCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTccaccca > 1:115137/1‑149 (MQ=255) tCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTccaccca < 2:665018/149‑1 (MQ=255) cGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCCCCGCGAACTTCCGTGGAGGTCTGAACGTAATCCAGTACTTCATCTccacgcccg > 2:341459/1‑144 (MQ=255) cGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACg > 1:1032426/1‑149 (MQ=255) gcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGAACTTCATCTCCACCCACGGTGCTc < 1:1008826/149‑1 (MQ=255) ggTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTaa > 1:539581/1‑149 (MQ=255) gTTCTGCGGCACAGATTCGGCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTaaa < 1:177666/149‑1 (MQ=255) ttCTGCGGCACAGATTCGTCACATTGCTGGTATGCGCTGTCTGATGGCGAAGCTCGATGGCTCCATCATCCAAACGCCAATCACCGCGAACTTCAGTGAAGGTCTAACCGGCCTCCAGTACTGCAACTCCACCCACCGTGCtggaagag > 2:127206/1‑142 (MQ=255) ggCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTgg > 1:614592/1‑149 (MQ=255) ggCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTgg > 1:614718/1‑149 (MQ=255) gCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCGTCTCCCCCCACGGTGCTCGTAAAGGGCTGGc > 2:768506/1‑149 (MQ=255) gCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAgg > 1:145442/1‑143 (MQ=255) gCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAgg < 2:145442/143‑1 (MQ=255) gCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGc < 1:364180/149‑1 (MQ=255) gCACAGATTCGTCAGCTTGCTGATATGCGTGGTCTGCTGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATGACCGCGAACTTCGGTGAAGGTCTGAACGTACTCCAGTTCTTCATCTCCACCCACGGGGCTCGTAAAGGTCTggt > 2:81757/1‑148 (MQ=255) gATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCACGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCGTCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATa > 1:656000/1‑149 (MQ=255) gATTCGTCAGCTTGCGGTAATGCGGGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATa < 2:968784/149‑1 (MQ=255) aTTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATAc > 1:450364/1‑149 (MQ=255) cgccAGCTGGCTGGCATGCGTCGTCCGATCGCGAAGCTGGATCGCCACTACCCGCAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGc < 1:38948/146‑1 (MQ=255) ggcAGCTGGCGGGTAGGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCGGCGGGTTTCGTAAAGGTCTGGCGGATACCGCa < 2:967614/147‑1 (MQ=255) gTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCa < 1:513251/149‑1 (MQ=255) gTCAGCTTGCTGGTAGGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCa < 2:1241592/149‑1 (MQ=255) tCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCAc > 1:577972/1‑149 (MQ=255) tCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGCAAAGGGCTGGCGGATACCGCAc > 2:1176274/1‑149 (MQ=255) ccAGCTCGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCAc < 1:681470/148‑1 (MQ=255) aGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGTCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTg > 1:292339/1‑149 (MQ=255) aGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCCGTACTTCGTCTCCCCCCACGGTCCTCGTAAAGGTCTGGCGGATACCGCCCTg > 2:128996/1‑149 (MQ=255) gCTGGTATGCTTGGTCATATGGCAGAGCTGGATGGCTCACTCAATGCATAACTAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAAc < 1:1323309/149‑1 (MQ=255) cTGGTATGCGTCGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACt < 1:1289242/149‑1 (MQ=255) tGGTATGCGTGGTCTGGTGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTg < 2:383741/149‑1 (MQ=255) tGGTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCCCGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTg > 1:788098/1‑149 (MQ=255) ggTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGACGGTTTGATTGTTTACGGCGACGTCAGCTCCACCCACGGTGCTCGTAAAGGTCTGCCGGACACCGCACGGAAAACTGc < 2:1300635/149‑1 (MQ=255) gTATGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAGGGTCTGGCGGATACCGCACTGAAAACTGCg > 1:41301/1‑149 (MQ=255) aTGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGaa < 2:614718/149‑1 (MQ=255) aTGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGaa < 2:614592/149‑1 (MQ=255) tGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGTTCTGGCGGATACCGCACTGAAAACTGCGAAc > 1:922351/1‑149 (MQ=255) tGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCCCTGAAAACTGCGacc > 1:803466/1‑147 (MQ=255) tGCGTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc > 1:263280/1‑149 (MQ=255) tGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCTGATACCGCACTGAAAACTGCGAACTCCg < 1:819312/149‑1 (MQ=255) tGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCg > 2:517835/1‑149 (MQ=255) ggTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCgg < 1:378819/149‑1 (MQ=255) tGATGGCGAAGCTGGATGGCTCCATCATCGAACCGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCCCTGAAAGCTGCGAACTCCGGTGAc > 2:1096209/1‑149 (MQ=255) tGATGGCGAAGCTGGATGGCTCAATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAc < 1:1249642/149‑1 (MQ=255) aTGGCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGCACTTCCGGGAAGGTCTGAACGTACTCCAGTACTTCATCTCCAACCACGGTGCTCGTAAAGGTCTGCCGGATACCGCACTGAAAACTGCGAACGCCGGTTAcgt > 1:837725/1‑147 (MQ=255) ggCGAAGCTGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCTAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGa > 2:1284138/1‑149 (MQ=255) gAAGCGGGACGGCTCCAGCATCGAAACGCCAACCACCGCGAACTTCCGCGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAACACTGCGAACTCCGGTTACCTGACtc < 2:665898/149‑1 (MQ=255) | GCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTC > NC_000913/4187451‑4187740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |