New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1456149	102 (0.830)	8 (0.070)	8/240	NT	6.8%	coding (225/498 nt)	paaD	ring 1,2‑phenylacetyl‑CoA epoxidase subunit
	?	NC_000913	= 1456169	121 (1.040)					coding (245/498 nt)	paaD	ring 1,2‑phenylacetyl‑CoA epoxidase subunit

CCCGGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1455996‑1456149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaccTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAATCAG  <  NC_000913/1456169‑1456022                                                                                                                                                                                                                                                                                                                CCCGGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGA                                                                                                                                                           <  2:654596/149‑1  CCGGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGAC                                                                                                                                                          >  1:785046/1‑149    GGAGATCCCGGTGCTTACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACA                                                                                                                                                         <  3:726715/148‑1    GGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAA                                                                                                                                                        >  1:632512/1‑149    GGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAA                                                                                                                                                        <  2:632512/149‑1    GGAAATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAAAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACA                                                                                                                                                         >  4:726715/1‑148                            TGATTTAGGCTTGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACC‑‑AACGGGGGTAAACCCGTTGGTT                                                                                                                              <  1:1060336/149‑1                             GATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCTGAACGGGGGTAAACCCGTTGGT                                                                                                                               <  4:843398/149‑1                                                  GTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACC‑‑AACGGGGGTAAACCCGTTGGTTGTC                                                                                                                           <  3:184114/130‑1                                                  GTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACC‑‑AACGGGGGTAAACCCGTTGGTTGTC                                                                                                                           >  4:184114/1‑130                                                                             ATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCTGAACGGGGGTAAACCCGTTGGTTGTCATTG                                                                                                                       >  1:521201/1‑109                                                                             ATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCTGAACGGGGGTAAACCCGTTGGTTGTCATTG                                                                                                                       <  2:521201/109‑1                                                                                                             GGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCTGAACGGGGGTAAACCCGTTGG                                                                                                                                >  1:1138943/1‑68                                                                                                             GGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCTGAACGGGGGTAAACCCGTTGG                                                                                                                                <  2:1138943/68‑1                                                                                                                                                       AACCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCCCCCATCCTTCT                                       <  3:672388/115‑1                                                                                                                                                       AACCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAAT     <  3:85812/149‑1                                                                                                                                                       AACCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAAT     >  4:13914/1‑149                                                                                                                                                       AACCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAAT     >  3:409307/1‑149                                                                                                                                                       AACCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAAT     <  4:81358/149‑1                                                                                                                                                       AACCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCT                                       >  4:672388/1‑115                                                                                                                                                         CCTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAATCA   <  3:704577/149‑1                                                                                                                                                          CTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCAAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCGCATCTGTGTCACATTACGCACCATGCCTAAATCAG  >  3:781307/1‑149                                                                                                                                                                                                                                                                                                                CCCGGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1455996‑1456149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaccTGAACGGGGGTAAACCCGTTGGTTGTCATTGCCTCACGTATCGCGCCAATCAAATGTTCCGTTGCCGGACAACCGGAATATGTCGGCGTAAAGCCGATCACCCATCCTTCTCCCATCTGTGTCACATTACGCACCATGCCTAAATCAG  <  NC_000913/1456169‑1456022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.