| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,050,012 | C→T | 5.1% | C219Y (TGT→TAT) ‡ | gcvT ← | aminomethyltransferase, tetrahydrofolate‑dependent, subunit (T protein) of glycine cleavage complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,050,012 | 0 | C | T | 5.1% | 408.1 / 7.2 | 118 | C219Y (TGT→TAT) ‡ | gcvT | aminomethyltransferase, tetrahydrofolate‑dependent, subunit (T protein) of glycine cleavage complex |
| Reads supporting (aligned to +/- strand): ref base C (57/55); new base T (3/3); total (60/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
TTCACGACCGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGTTTCATCCC > NC_000913/3049864‑3050160 | ttCACGACCGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCcac > 3:1107163/1‑149 (MQ=255) tCACGACCGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCcaca < 1:238963/149‑1 (MQ=255) gACCGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGc < 2:243836/149‑1 (MQ=255) gACCGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGc > 2:837871/1‑149 (MQ=255) cGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTa > 4:251118/1‑149 (MQ=255) gATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTaa > 1:940639/1‑149 (MQ=255) gATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTaa > 4:362311/1‑149 (MQ=255) gATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTaa > 4:1036207/1‑149 (MQ=255) aTAAAGTCACGATCTGCCGGTTCCCAGGAGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCATGTGGCttgg > 3:785048/1‑146 (MQ=255) aTAAAGTCACGATCTGCCGGTTCCCAGGAGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCATGTGGCttcg < 4:785048/148‑3 (MQ=255) tAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAaca < 2:765688/149‑1 (MQ=255) aaaGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGTCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAacac < 1:1107258/149‑1 (MQ=255) aCGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCtt > 2:71517/1‑149 (MQ=255) gATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTcc > 4:529815/1‑149 (MQ=255) aTCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTcca > 1:620545/1‑149 (MQ=255) cTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTccacc > 3:1068868/1‑149 (MQ=255) ccAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGcc > 3:291470/1‑149 (MQ=255) cAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCa > 4:1028226/1‑149 (MQ=255) gATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAAt > 4:621583/1‑149 (MQ=255) tGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCg < 4:826483/149‑1 (MQ=255) ggTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCgg > 4:190213/1‑149 (MQ=255) gTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGc < 1:1051392/149‑1 (MQ=255) gTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGc < 1:302243/149‑1 (MQ=255) tCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGcc < 4:1107163/149‑1 (MQ=255) gccAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCATGTGGCttgg > 4:740255/2‑112 (MQ=255) cAGCCCATGTTGGCGGCTAGAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCtt < 3:834130/110‑1 (MQ=255) cAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCtt > 4:834130/1‑110 (MQ=255) cAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGc < 3:60676/135‑1 (MQ=255) ccATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCtttt < 1:675555/149‑1 (MQ=255) aTGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTc < 2:731604/149‑1 (MQ=255) ttGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCAtt < 3:1039495/149‑1 (MQ=255) ggcTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTg < 2:690400/145‑1 (MQ=255) ggcTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTg > 1:690400/1‑145 (MQ=255) ggcTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCa > 3:79072/1‑149 (MQ=255) cTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAgc < 1:18541/149‑1 (MQ=255) tAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAgcg > 3:518585/1‑149 (MQ=255) aGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCaa > 3:150127/1‑149 (MQ=255) ggAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAAt < 1:71517/149‑1 (MQ=255) gagagaTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAAtt > 1:740707/1‑149 (MQ=255) gagagaTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAACCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAAtt < 3:499640/149‑1 (MQ=255) agaTGGTTTCGTCCATCTGCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCATAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCa > 1:333892/1‑149 (MQ=255) agaTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCa > 1:179434/1‑149 (MQ=255) gaTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACAcc < 1:1132288/90‑1 (MQ=255) gaTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACAcc > 2:1132288/1‑90 (MQ=255) aTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATa < 3:190213/149‑1 (MQ=255) aTGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATa > 1:302805/1‑149 (MQ=255) gTTTCGTCCATCTCTTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGcc > 3:85848/1‑149 (MQ=255) tCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGc < 3:1036207/149‑1 (MQ=255) cGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAGGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCt < 2:186344/149‑1 (MQ=255) aTCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCAcc > 4:401853/1‑149 (MQ=255) ctcCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCgg > 3:871784/1‑149 (MQ=255) ctcCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCgg < 2:940639/149‑1 (MQ=255) tcCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGt > 2:513949/1‑149 (MQ=255) ccTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGta > 4:153692/1‑149 (MQ=255) ccTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGta < 4:803259/149‑1 (MQ=255) cTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGtat > 1:926532/1‑149 (MQ=255) cTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGtat > 4:425099/1‑149 (MQ=255) cTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATAGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGtat > 1:838656/1‑149 (MQ=255) gACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCAt < 3:479967/111‑1 (MQ=255) gACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCAt > 4:479967/1‑111 (MQ=255) aTAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACAccc < 1:449206/67‑1 (MQ=255) aTAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACAccc > 2:449206/1‑67 (MQ=255) aTAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAg > 3:948032/1‑149 (MQ=255) aTAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAg > 2:316163/1‑149 (MQ=255) aaaGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAgtg > 3:308719/1‑149 (MQ=255) aaaGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAgtg > 1:777342/1‑149 (MQ=255) gATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAgtggtg < 1:1074767/149‑1 (MQ=255) gATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAgtggtg < 1:837871/149‑1 (MQ=255) gATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAgtggtg > 2:78082/1‑149 (MQ=255) tGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGccc < 3:1104835/119‑1 (MQ=255) tGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGccc > 4:1104835/1‑119 (MQ=255) cGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACa < 2:179434/149‑1 (MQ=255) cTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGa < 4:518585/149‑1 (MQ=255) ttCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGAt < 3:1028226/149‑1 (MQ=255) ttCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGAt < 3:621583/149‑1 (MQ=255) tCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATc < 4:85848/149‑1 (MQ=255) tCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATc < 2:732973/149‑1 (MQ=255) aGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGATGGCAATAAACAGATcgcc > 3:465359/1‑149 (MQ=255) gCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACa > 3:263560/1‑138 (MQ=255) gCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACa < 4:263560/138‑1 (MQ=255) gCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGAACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATcgcccgcc > 1:741289/1‑149 (MQ=255) gCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGc > 2:273313/1‑149 (MQ=255) tCACGCGCGCCCAAGCCACATGGCGTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTTGTGGCAATAAACAGATCGCCCGCCTGCACGcc > 2:126875/1‑149 (MQ=255) aCGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGc > 2:1121988/1‑96 (MQ=255) aCGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGc < 1:1121988/96‑1 (MQ=255) gcgcgcCCAAGCCACATGGCTTAACACCGGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAg > 4:703960/1‑149 (MQ=255) gcgcgcCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAg < 4:291470/149‑1 (MQ=255) cgcgcCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGa > 4:503800/1‑149 (MQ=255) gcgcCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGaa < 2:543793/149‑1 (MQ=255) gtgttaaGCCATGTGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCt < 4:544255/130‑1 (MQ=255) gtgttaaGCCATGTGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCt > 3:544255/6‑135 (MQ=255) gcCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACg < 2:302805/149‑1 (MQ=255) cccAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACgg < 4:150127/149‑1 (MQ=255) ccAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGt < 4:1068868/149‑1 (MQ=255) cAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAACAACGGtt < 2:620545/149‑1 (MQ=255) gCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAAc < 2:81393/142‑1 (MQ=255) acaTGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGTTTCATcc > 1:737967/1‑149 (MQ=255) acaTGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGTTTCATcc < 1:208849/149‑1 (MQ=255) acaTGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGTTTCATcc < 3:503800/149‑1 (MQ=255) caTGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGTTTCATccc > 3:277923/1‑149 (MQ=255) | TTCACGACCGATAAAGTCACGATCTGCCGGTTCCCAGGCGATGGTCCAGCCCATGTTGGCGGCTAAAGGAGAGATGGTTTCGTCCATCTCCTGACCATAAAGATTCATGCCCGCTTCCAGACGCAGCGTGTCACGCGCGCCCAAGCCACATGGCTTAACACCCGCTTCCACCAGCGCACGCCAGAAATCGGCCGCTTTTTCATTGGGCAGCGCAATTTCATAGCCCGCTTCACCGGTATAACCAGTGGTGGCAATAAACAGATCGCCCGCCTGCACGCCAAAGAACGGTTTCATCCC > NC_000913/3049864‑3050160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |