| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2763051 = | 91 (0.950) | 3 (0.030) | 3/246 | NT | 3.5% | coding (490/2190 nt) | yfjK | radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage |
| ? | NC_000913 | 2763088 = | 80 (0.890) | coding (453/2190 nt) | yfjK | radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGTCTGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2763203‑2763051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagagcCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATTGAG > NC_000913/2763088‑2763235 AGTCTGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAA < 1:564359/149‑1 CTGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAG < 3:852187/149‑1 TGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGC < 2:684052/149‑1 AAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGC > 3:522844/1‑144 AAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGC < 4:522844/144‑1 CGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGC < 3:321820/115‑1 CGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGC > 4:321820/1‑115 GTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGA > 3:72800/1‑149 GCAAGAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTG > 1:120527/1‑149 GCAAGAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTG > 4:573858/1‑149 GAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATT > 4:777164/1‑149 GAGCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATT < 4:387222/149‑1 GCCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATTGA > 1:306336/1‑149 CCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATTGAG > 3:611564/1‑149 CCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATTGAG < 2:325723/149‑1 CCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTG > 3:823072/1‑109 CCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTG < 4:823072/109‑1 AGTCTGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2763203‑2763051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagagcCACGGTTGGAACAACCAGAACAAGCCGTTTCAAAGTTCCCATGCCGAGCAATGAATCGACGATTGCACTTTTGCCCATGCTTGTAGGTGCACTCAGCACCACGTTTTGACCAGACTTGAGCAGATCGAATATGTGGAACTGCATTGAG > NC_000913/2763088‑2763235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |