New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1117875NA (NA)7 (0.010) 6/238 NT NA noncoding (8/21 nt) REP99 (repetitive extragenic palindromic) element; contains 1 REP sequences REP99 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 1117880 NA (NA)noncoding (13/21 nt) REP99 (repetitive extragenic palindromic) element; contains 1 REP sequences REP99 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 746 total aligned reads displayed.

CTGCGAAGAAAGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGAAGCCTGCAC  >  NC_000913/1117727‑1118022
                                                                                                                                                    |                                                                                                                                                   
   cGAAGAAAGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGt                                                                                                                                                  >  1:2555181/1‑149 (MQ=255)
    gaagaaAGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTg                                                                                                                                                 >  3:2262452/1‑149 (MQ=255)
        aaaGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcat                                                                                                                                             <  1:6549887‑M2/149‑4 (MQ=255)
         aaGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcatc                                                                                                                                            >  2:703150‑M2/1‑145 (MQ=255)
         aaGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcatc                                                                                                                                            <  1:6839086‑M2/149‑5 (MQ=255)
          aGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcatcc                                                                                                                                           >  1:6331420‑M2/1‑144 (MQ=255)
          aGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcatcc                                                                                                                                           <  1:2768495‑M2/149‑6 (MQ=255)
             gcgTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACATGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcatccggc                                                                                                                                        <  2:1013521‑M2/149‑9 (MQ=255)
               gTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCcatccggcaa                                                                                                                                      <  4:2748371‑M2/149‑11 (MQ=255)
                ttACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAAc                                                                                                                                     >  4:6290888/1‑149 (MQ=255)
                      ccAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCa                                                                                                                               <  1:34253/149‑1 (MQ=255)
                      ccAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCa                                                                                                                               <  4:401262/149‑1 (MQ=255)
                        agaagaACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACg                                                                                                                             <  4:4268062/149‑1 (MQ=255)
                         gaagaaCAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGgcacgcatccggcaa                                                                                                                                      <  3:2112828‑M1/139‑16 (MQ=255)
                         gaagaaCAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGc                                                                                                                            <  2:4785705/149‑1 (MQ=255)
                           agaaCAGCGACGCCGTCGGGCAGGACGTGAAAAAGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCtt                                                                                                                          <  4:129389/149‑1 (MQ=255)
                            gaaCAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTa                                                                                                                         <  1:4575642/149‑1 (MQ=255)
                              aCAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCa                                                                                                                               >  3:5734224/1‑141 (MQ=255)
                              aCAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACt                                                                                                                       >  4:5942591/1‑149 (MQ=255)
                                aGCGACGCCGTCGGGCAGGACGTGAAAATGGCAGTAAGATCTTTAATAGGTCTCGTGGGCGTCTGAATACAACACTGTGCATTCCTTATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCTCGCTTACTTc                                                                                                                     >  2:4423472/1‑149 (MQ=255)
                                   gACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTctgc                                                                                                                  <  2:1309704/149‑1 (MQ=255)
                                        cGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTAc                                                                                                             >  3:4569040/1‑149 (MQ=255)
                                        cGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTAc                                                                                                             >  3:3547140/1‑149 (MQ=255)
                                              gCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTc                                                                                                       >  2:3890692/1‑149 (MQ=255)
                                                aGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTAc                                                                                                             <  1:709894/141‑1 (MQ=255)
                                                aGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCACCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCa                                                                                                     <  2:2951188/149‑1 (MQ=255)
                                                  gACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTctgct                                                                                                                 <  1:1090551/135‑1 (MQ=255)
                                                     gTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGaa                                                                                                >  4:6046529/1‑149 (MQ=255)
                                                     gTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGaa                                                                                                >  3:4317399/1‑149 (MQ=255)
                                                     gTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGaa                                                                                                >  4:5218847/1‑149 (MQ=255)
                                                         aaaTGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAaataa                                                                                            <  4:1855269/149‑1 (MQ=255)
                                                          aaTGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAaataat                                                                                           >  3:1077988/1‑149 (MQ=255)
                                                            tGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCa                                                                                         <  2:6801717/149‑1 (MQ=255)
                                                                  tAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCa                                                                                         <  1:91528/143‑1 (MQ=255)
                                                                     gATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACtt                                                                                >  4:3171522/1‑149 (MQ=255)
                                                                      aTCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTc                                                                               <  1:5131179/149‑1 (MQ=255)
                                                                       tCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTcc                                                                              <  3:2778139/149‑1 (MQ=255)
                                                                        cTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCt                                                                             <  3:2645146/149‑1 (MQ=255)
                                                                           taataaGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTgag                                                                          >  1:3146200/1‑149 (MQ=255)
                                                                             ataaGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGaa                                                                        >  4:2397260/1‑149 (MQ=255)
                                                                             ataaGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGaa                                                                        >  4:6501427/1‑149 (MQ=255)
                                                                               aaGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGc                                                                      <  2:2768495/149‑1 (MQ=255)
                                                                               aaGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGc                                                                      >  2:1777355/1‑149 (MQ=255)
                                                                                aGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCt                                                                     <  1:1810246/149‑1 (MQ=255)
                                                                                 gTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACa                                                                                                                                    <  4:686156/85‑1 (MQ=255)
                                                                                 gTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACa                                                                                                                                    >  3:686156/1‑85 (MQ=255)
                                                                                 gTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTg                                                                    <  4:4652991/149‑1 (MQ=255)
                                                                                  tctcGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTc                                                                                                                                <  2:3739044/88‑1 (MQ=255)
                                                                                   ctcGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCt                                                                     <  2:6670544/146‑1 (MQ=255)
                                                                                         gACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTg                                                                            <  3:5425971/133‑1 (MQ=255)
                                                                                              cTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGt                                                       <  3:881168/149‑1 (MQ=255)
                                                                                               tGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTc                                                      >  1:2088182/1‑149 (MQ=255)
                                                                                               tGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTAAGCCTTCCACTGAAATAATCAGATCCACTTCCCGAGAAGCTGGACCTAAATCTGTc                                                      >  1:4427346/1‑149 (MQ=255)
                                                                                                gAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGt                                                       >  1:4813842/1‑147 (MQ=255)
                                                                                                 aaTACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTa                                                                                                                         <  3:611689/80‑1 (MQ=255)
                                                                                                 aaTACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCtt                                                    >  4:3377003/1‑149 (MQ=255)
                                                                                                 aaTACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCtt                                                    >  3:3119898/1‑149 (MQ=255)
                                                                                                     caacaCTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGata                                                <  1:1542032/149‑1 (MQ=255)
                                                                                                      aacaCTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGAc                                                                 <  1:3581077/131‑1 (MQ=255)
                                                                                                      aacaCTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGatat                                               >  2:5398578/1‑149 (MQ=255)
                                                                                                      aacaCTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGatat                                               >  2:3265073/1‑149 (MQ=255)
                                                                                                        cacTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTg                                             <  4:5698430/149‑1 (MQ=255)
                                                                                                        cacTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTg                                             >  2:2100002/1‑149 (MQ=255)
                                                                                                        cacTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTg                                             >  3:4894743/1‑149 (MQ=255)
                                                                                                         acTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGa                                            <  3:5321432/149‑1 (MQ=255)
                                                                                                          cTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGaa                                           <  2:7172731/149‑1 (MQ=255)
                                                                                                          cTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGaa                                           <  3:18995/149‑1 (MQ=255)
                                                                                                           tgtgCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAaat                                                                                              >  3:3911839/1‑97 (MQ=255)
                                                                                                             tgCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTat                                                                                                             <  1:5837427/80‑2 (MQ=255)
                                                                                                             tgCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTat                                                                                                             >  2:5837427/1‑79 (MQ=255)
                                                                                                              gCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTcc                                       >  2:2276459/1‑149 (MQ=255)
                                                                                                               cATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCt                                      <  2:4865297/149‑1 (MQ=255)
                                                                                                                aTTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCtt                                     <  1:5647723/149‑1 (MQ=255)
                                                                                                                  tCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGa                                   <  1:2366628/149‑1 (MQ=255)
                                                                                                                  tCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGa                                   <  1:6727810/149‑1 (MQ=255)
                                                                                                                    cTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCAc                                                                                                                              <  3:6320597/56‑1 (MQ=255)
                                                                                                                    cTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGc                                 <  3:1542840/149‑1 (MQ=255)
                                                                                                                    cTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGc                                 >  1:6113696/1‑149 (MQ=255)
                                                                                                                           aaCAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTcc                                       <  2:4221810/136‑1 (MQ=255)
                                                                                                                              aGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGc                       >  2:5149014/1‑149 (MQ=255)
                                                                                                                                aataaataTCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCt                                                     >  2:6408898/1‑117 (MQ=255)
                                                                                                                                aataaataTCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCt                     >  1:4199947/1‑149 (MQ=255)
                                                                                                                                 ataaataTCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCtt                    <  4:1152696/149‑1 (MQ=255)
                                                                                                                                 ataaataTCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCC‑GAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTc                   >  3:1696548/1‑149 (MQ=255)
                                                                                                                                  taaataTCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCTCTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTc                   <  2:875446/149‑1 (MQ=255)
                                                                                                                                   aaataTCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCg                  <  4:1684275/149‑1 (MQ=255)
                                                                                                                                     atatCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGc                <  4:3706667/149‑1 (MQ=255)
                                                                                                                                        tCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTTCCTTCGGCCTc             <  1:5398578/149‑1 (MQ=255)
                                                                                                                                        tCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTc             <  2:34395/149‑1 (MQ=255)
                                                                                                                                          aTTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGa           >  2:610410/1‑149 (MQ=255)
                                                                                                                                          aTTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGa           >  1:3824988/1‑149 (MQ=255)
                                                                                                                                           ttGCCGGATGCGTGCcatccggcaatgatatttattctgttggatcaggaatgcacagtgttgtattcagacgtccacgagacttattaaagatcttattgccattttcacgtcctgcccgacggcgtcgctgttcttc                    >  4:2112828‑M2/1‑15 (MQ=255)
                                                                                                                                           ttGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGaa          >  4:5043355/1‑149 (MQ=255)
                                                                                                                                             gCCGGATGgcacgcatccggcaatgatatttattctgttggatcaggaatgcacagtgttgtattcagacgtccacgagacttattaaagatcttattgccattttcacgtcctgcccgacggcgtcgctgttcttctggcggtaacgc        <  3:6555475‑M1/149‑142 (MQ=255)
                                                                                                                                             gCCGGATGgcacgcatccggcaatgatatttattctgttggatcaggaatgcacagtgttgtattcagacgtccacgagacttattaaagatcttattgccattttcacgtcctgcccgacggcgtcgctgttcttctggcggtaacgc        >  1:7245809‑M1/1‑8 (MQ=255)
                                                                                                                                             gCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGAAGc        <  2:2469373/149‑1 (MQ=255)
                                                                                                                                              ccGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGAAGcc       <  2:4548942/149‑1 (MQ=255)
                                                                                                                                              ccGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGAAGcc       >  3:5954975/1‑149 (MQ=255)
                                                                                                                                               cGGATGgcacgcatccggcaatgatatttattctgttggatcaggaatgcacagtgttgtattcagacgtccacgagacttattaaagatcttattgccattttcacgtcctgcccgacggcgtcgctgttcttctggcggtaacgcgc      >  4:2895885‑M1/1‑6 (MQ=255)
                                                                                                                                               cGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTaa                                                             >  4:5465155/1‑94 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CTGCGAAGAAAGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAAATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACGCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATCCACTTCCTGAGAAGCTGGACCTAAATCTGTCTTGATATTGAAGTCCTTGAGCTTAATTTTGCCTTCGGCCTCGAAGCCTGCAC  >  NC_000913/1117727‑1118022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.