New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4568674 =862 (1.090)14 (0.020) 9/250 NT 1.7% intergenic (‑155/‑324) mdtM/yjiP multidrug efflux system protein/pseudogene, transposase_31 family protein
?NC_000913 4568703 = 829 (1.090)intergenic (‑184/‑295) mdtM/yjiP multidrug efflux system protein/pseudogene, transposase_31 family protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 977 total aligned reads displayed.

CAACTCCTTGTCCGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAGGGGA  >  NC_000913/4568526‑4568822
                                                                                                                                                    |                                                                                                                                                    
 tttacatgtcctgtacccggcagatattcccctttccaccgcgctcttttgattaaccgcaaattttaattacacttaaggtgtatattttctatgcaacccatcaattcaagaggtgtaatgtgctgatgactatttgtaatcgttat                                                                                                                                                     >  3:1559803‑M1/148‑149 (MQ=255)
  ttacatgtcctgtacccggcagatattcccctttccaccgcgctcttttgattaaccgcaaattttaattacacttaaggtgtatattttctatgcaacccatcaattcaagaggtgtaatgtgctgatgactatttgtaatcgttata                                                                                                                                                    >  2:3158122‑M1/147‑149 (MQ=255)
   cTCCTTGTCCGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATAc                                                                                                                                                   <  3:3831982/149‑1 (MQ=255)
   cTCCTTGTCCGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATAc                                                                                                                                                   <  1:3685185/149‑1 (MQ=255)
      cTTGTCCGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACttt                                                                                                                                                <  3:3283572/149‑1 (MQ=255)
       ttGTCCGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTc                                                                                                                                               <  1:955756/149‑1 (MQ=255)
           ctgtacccggcagatattcccctttccaccgcgctcttttgattaaccgcaaattttaattacacttaaggtgtatattttctatgcaacccatcaattcaagaggtgtaatgtgctgatgactatttgtaatcgttat                                                                                                                                                     <  2:1190793‑M1/2‑1 (MQ=255)
           ccGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGAAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGATCACACAGACAGAGAAATACTTTCTGAc                                                                                                                                           >  3:4200890/1‑149 (MQ=255)
            tgtacccggcagatattcccctttccaccgcgctcttttgattaaccgcaaattttaattacacttaaggtgtatattttctatgcaacccatcaattcaagaggtgtaatgtgctgatgactatttgtaatcgtta                                                                                                                                                      <  3:4039255‑M1/1‑1 (MQ=255)
             ggAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACtt                                                                                                                                         >  4:2759056/1‑149 (MQ=255)
                gacccccAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCgg                                                                                                                                      <  3:4441555/146‑1 (MQ=255)
                gaACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCgg                                                                                                                                      <  2:4203577/149‑1 (MQ=255)
                   ccccAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTc                                                                                                                                   >  4:3449926/1‑149 (MQ=255)
                   ccccAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTc                                                                                                                                   >  2:5904999/1‑149 (MQ=255)
                   ccccAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTc                                                                                                                                   >  4:6014114/1‑149 (MQ=255)
                   caccAACGGGGAAAACGAGATTCAATAGCGTCGGTAATGACGAAAGGTAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGtt                                                                                                                                   >  2:634120/3‑148 (MQ=255)
                    cccAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCa                                                                                                                                  >  3:665131/1‑149 (MQ=255)
                      cAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa                                                                                                                                >  1:4392067/1‑149 (MQ=255)
                        aCGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAAt                                                                                                                              >  3:6083807/1‑149 (MQ=255)
                          ggggAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGt                                                                                                                            <  2:6580288/149‑1 (MQ=255)
                              ccctttccaccgcgctcttttgattaaccgcaaattttaattacacttaaggtgtatattttctatgcaacccatcaattcaagaggtgtaatgtgctgatgactatttgtaatcgtta                                                                                                                                                      <  1:4858202‑M1/1‑1 (MQ=255)
                               aaaCGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAAc                                                                                                                       >  2:1399592/1‑149 (MQ=255)
                               aaaCGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAAc                                                                                                                       <  3:4331308/149‑1 (MQ=255)
                                aaCGAAATTCAATGCCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACg                                                                                                                      >  2:385364/1‑149 (MQ=255)
                                aaCGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACg                                                                                                                      >  4:5468347/1‑149 (MQ=255)
                                  cGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGAt                                                                                                                    <  1:2445441/149‑1 (MQ=255)
                                  cGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGAt                                                                                                                    >  1:1007019/1‑149 (MQ=255)
                                   gAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGAtt                                                                                                                   >  2:4410075/1‑149 (MQ=255)
                                    aaaTTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGAGAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTa                                                                                                                  >  4:4434078/1‑149 (MQ=255)
                                       ttCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAAt                                                                                                                              <  4:4721513/134‑1 (MQ=255)
                                         cAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAAt                                                                                                             <  3:4641157/149‑1 (MQ=255)
                                          aaTACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATa                                                                                                            >  1:1313081/1‑149 (MQ=255)
                                              ccGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtca                                                                                                        >  4:2327787/1‑149 (MQ=255)
                                                gTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcatc                                                                                                      >  1:6747289/1‑149 (MQ=255)
                                                  cGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAg                                                                                                    <  3:5237032/149‑1 (MQ=255)
                                                    gTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGca                                                                                                  >  4:875757/1‑149 (MQ=255)
                                                     tAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGcac                                                                                                 >  1:4136355/1‑149 (MQ=255)
                                                      aaTGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAGCACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGcaca                                                                                                >  3:6384560/1‑149 (MQ=255)
                                                         gACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTa                                                                                             <  3:2495999/149‑1 (MQ=255)
                                                            gAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTacac                                                                                          <  1:6525904/149‑1 (MQ=255)
                                                                    ggTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGaa                                                                                  <  3:481752/149‑1 (MQ=255)
                                                                     gTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAAt                                                                                 >  3:7016584/1‑149 (MQ=255)
                                                                      tGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAAtt                                                                                <  1:2070637/149‑1 (MQ=255)
                                                                         gaAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAATGATTACAAATAGTCATCAGCACCTTACACCTCTTGAATTGAt                                                                             <  3:5627884/149‑1 (MQ=255)
                                                                         gaAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGAt                                                                             >  2:187501/1‑149 (MQ=255)
                                                                           aGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATgg                                                                           <  1:5629313/149‑1 (MQ=255)
                                                                           aGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATgg                                                                           <  1:5270106/149‑1 (MQ=255)
                                                                             ggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGt                                                                         >  4:4997112/1‑149 (MQ=255)
                                                                              gCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcatc                                                                                                      >  2:5684741/1‑119 (MQ=255)
                                                                                 aCGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCa                                                                     <  3:5054424/149‑1 (MQ=255)
                                                                                   gagaCTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATa                                                                   <  3:1840670/149‑1 (MQ=255)
                                                                                          cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAata                                                            >  4:2986118/1‑149 (MQ=255)
                                                                                           aaaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGAt                                                                             <  2:2182414/131‑1 (MQ=255)
                                                                                           aaaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAatat                                                           >  1:3126248/1‑149 (MQ=255)
                                                                                            aaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata                                                          <  1:763081/149‑1 (MQ=255)
                                                                                            aaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATGACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata                                                          <  2:5350900/149‑1 (MQ=255)
                                                                                             aTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATac                                                         >  4:5247610/1‑149 (MQ=255)
                                                                                               gTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATacac                                                       <  1:3510208/149‑1 (MQ=255)
                                                                                                tACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCggg                                                                                                                                     <  3:2873585/70‑1 (MQ=255)
                                                                                                     ccatcaattcaagaggtgtaatgtgctgatgactatttgtaatcgttATACATTCTGACTTCGGGTCAGAAt                                                                                                                              >  4:6226107‑M1/48‑72 (MQ=255)
                                                                                                     aaTTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAg                                                 >  4:4274128/1‑149 (MQ=255)
                                                                                                       tttCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCgg                                                                                                                                      >  2:2584733/1‑62 (MQ=255)
                                                                                                       tttCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtg                                               >  3:5943518/1‑149 (MQ=255)
                                                                                                       tttCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtg                                               >  1:1716239/1‑149 (MQ=255)
                                                                                                             gTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTa                                         >  4:1096086/1‑149 (MQ=255)
                                                                                                               aaTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcatc                                                                                                      <  4:2541246/86‑1 (MQ=255)
                                                                                                               aaTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATg                                                                            <  2:4778698/112‑1 (MQ=255)
                                                                                                               aaTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGa                                                                 >  2:3439350/1‑123 (MQ=255)
                                                                                                               aaTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTaaa                                       >  1:3866900/1‑149 (MQ=255)
                                                                                                                 tCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTaa                                                  <  1:3356148/136‑1 (MQ=255)
                                                                                                                 tCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAAt                                     >  3:1201609/1‑149 (MQ=255)
                                                                                                                     ccACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTaca                                                                                           <  2:3570774/91‑1 (MQ=255)
                                                                                                                     ccACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGc                                 <  4:6963035/149‑1 (MQ=255)
                                                                                                                      cacaCTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCg                                <  1:2814516/149‑1 (MQ=255)
                                                                                                                      cacaCTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCg                                >  2:6864005/1‑149 (MQ=255)
                                                                                                                      cacaCTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCg                                >  2:907784/1‑149 (MQ=255)
                                                                                                                        cacTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGt                              <  3:2734945/149‑1 (MQ=255)
                                                                                                                         acTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACGAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGtt                             >  4:4113919/1‑149 (MQ=255)
                                                                                                                           tGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTaa                           >  3:2092055/1‑149 (MQ=255)
                                                                                                                            gCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAAt                          <  4:3798316/149‑1 (MQ=255)
                                                                                                                             ccTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATc                         <  1:2613322/149‑1 (MQ=255)
                                                                                                                                 tgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCaaaa                     <  2:4577884/149‑1 (MQ=255)
                                                                                                                                 tgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCaaaa                     <  2:7107900/149‑1 (MQ=255)
                                                                                                                                    acacacATACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTATAAATGGTAATCACTACATTGCTCAACATTACTTCATGGGTTGCGCAGAAAATATACACCTAAACAGTAATTAAAATTTCCAGTTAATGAAAaaag                  >  4:2068008/1‑149 (MQ=255)
                                                                                                                                     cacacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAgc                 <  1:7050005/149‑1 (MQ=255)
                                                                                                                                      acacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAAttt                                   <  1:6310966/130‑1 (MQ=255)
                                                                                                                                      acacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTa                            <  3:2261236/137‑1 (MQ=255)
                                                                                                                                      acacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAgcg                >  2:27932/1‑149 (MQ=255)
                                                                                                                                      acacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAgcg                >  3:814275/1‑149 (MQ=255)
                                                                                                                                          agacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGt            >  4:1706010/1‑149 (MQ=255)
                                                                                                                                           gacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTg           <  4:1387607/149‑1 (MQ=255)
                                                                                                                                                agaAATACTTTCTGACTTCGGGTCAGATTGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAg      >  3:3534729/1‑149 (MQ=255)
                                                                                                                                                agaAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAg      >  1:5470587/1‑149 (MQ=255)
                                                                                                                                                agaAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAg      <  1:5863459/149‑1 (MQ=255)
                                                                                                                                                  aaaTACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAGATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAggg    <  1:4642880/149‑1 (MQ=255)
                                                                                                                                                  aaaTACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAggg    <  1:503748/149‑1 (MQ=255)
                                                                                                                                                   aaTACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAgggg   >  2:5148468/1‑149 (MQ=255)
                                                                                                                                                    ATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGa                                                                              <  3:3086695‑M1/73‑1 (MQ=255)
                                                                                                                                                    ATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAGGGGa  >  4:3258897‑M1/1‑149 (MQ=255)
                                                                                                                                                    ATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAGGGGa  >  4:665131‑M1/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CAACTCCTTGTCCGGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAAAGAGCGCGGTGGAAAGGGGA  >  NC_000913/4568526‑4568822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.