| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,673,034 | T→C | 13.6% | F330L (TTT→CTT) | hcaD → | phenylpropionate dioxygenase, ferredoxin reductase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,673,034 | 0 | T | C | 13.6% | 1615.9 / 200.4 | 618 | F330L (TTT→CTT) | hcaD | phenylpropionate dioxygenase, ferredoxin reductase subunit |
| Reads supporting (aligned to +/- strand): ref base T (245/286); new base C (39/45); total (287/331) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.96e-01 | |||||||||||
Only 100 of 644 total aligned reads displayed.
TCTTGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGAT > NC_000913/2672886‑2673182 | tCTTGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGt > 1:1405077/1‑149 (MQ=255) ttGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGttt < 4:1243565/149‑1 (MQ=255) ttGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGttt > 4:1849697/1‑149 (MQ=255) ttGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGttt > 1:784636/1‑149 (MQ=255) tGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTa < 4:1710202/149‑1 (MQ=255) aTAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTAtt < 2:6991756/149‑1 (MQ=255) tAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTg < 3:7004698/149‑1 (MQ=255) gTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGat < 2:4846144/149‑1 (MQ=255) aCTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGc < 4:2301690/149‑1 (MQ=255) tACACCGCTGCGAAAGCTGGGGAAACGCCAATAACCAGGCGCAAATTGCCGCTGACGCAATGTTAGGGCTAACGCTACAGCTACTGCCGTCGCAGTGGTTCTGGAGCGCTCAGTACAGTGCTAACTTCCAGTTTATTGCCGATATGCGt < 2:5974815/149‑1 (MQ=255) tACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTAtt > 2:7156927/1‑137 (MQ=255) cacCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTgg < 3:3946843/149‑1 (MQ=255) acCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTgg < 2:2786521/148‑1 (MQ=255) acCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGc > 4:3469783/1‑149 (MQ=255) ccGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCg < 2:1547415/149‑1 (MQ=255) gAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTg < 1:497698/149‑1 (MQ=255) gCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCtt < 3:5419789/149‑1 (MQ=255) cTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCttt > 1:6229465/1‑149 (MQ=255) cTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCttt < 3:1475370/149‑1 (MQ=255) aaaaCGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGt < 2:2219754/149‑1 (MQ=255) aaaCGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTg < 1:6989291/149‑1 (MQ=255) aaCGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTgg > 3:2383671/1‑149 (MQ=255) aCGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGc > 4:6642122/1‑149 (MQ=255) gCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCaa > 3:6491543/1‑149 (MQ=255) cAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAAcc > 1:2094093/1‑149 (MQ=255) cAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAAcc > 1:5854851/1‑149 (MQ=255) aaTAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAAccc > 4:742592/1‑149 (MQ=255) aaTAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAAccc > 2:5501915/1‑149 (MQ=255) aaTAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAAccc > 2:2634262/1‑149 (MQ=255) cAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGaa < 1:5407000/149‑1 (MQ=255) cAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGaa < 4:2450683/149‑1 (MQ=255) cAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGaa < 2:3634036/149‑1 (MQ=255) cAAATTGCCACTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGaa < 4:4572374/149‑1 (MQ=255) aTTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGc < 4:58219/149‑1 (MQ=255) tgccgctgccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCCGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGa < 4:4039902/149‑1 (MQ=255) gccgctgccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGAt > 2:5070271/1‑149 (MQ=255) ccgctgccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGTCATGGTTCTGGAGCGATCAGTACAGTGATAACTTGCAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGAtt > 4:4385202/1‑149 (MQ=255) ccgctgccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAAccc > 1:1211796/1‑130 (MQ=255) tgccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGt < 3:5712495/149‑1 (MQ=255) tgccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGt < 4:6491543/149‑1 (MQ=255) gccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGtt < 4:4220487/149‑1 (MQ=255) ccgatcctGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGtt < 1:3091387/142‑1 (MQ=255) ccgcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGttt > 1:6736790/1‑149 (MQ=255) gcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTaa > 3:5015496/1‑149 (MQ=255) gcAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTaa > 1:1581059/1‑149 (MQ=255) aaTGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATc < 1:3875945/149‑1 (MQ=255) gTTAGGGCTACCGCTACCCCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTTGGGATTTGCGTGGCGATGACTGGGTTTGTCGTGGGCACCCGGAAACTCAGAAGGCGGTTTGGTTTagattgg > 2:3091387/1‑143 (MQ=255) gggCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTa > 4:2974885/1‑139 (MQ=255) gggCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCaaaa < 4:3180517/149‑1 (MQ=255) ggCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTCGTCGTGGCAACCCGGAAACGCAGAAGGCGATTTGGTTTAATCTGCAAAAc < 2:3321769/149‑1 (MQ=255) gctaccgctaccGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACg < 3:1727651/149‑1 (MQ=255) taccgctaccgcTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGc < 3:1929085/149‑1 (MQ=255) gctaccgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAAt < 1:4162048/133‑1 (MQ=255) gctaccgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAAt > 2:4162048/1‑133 (MQ=255) gctaccgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGt < 4:7034442/147‑1 (MQ=255) gctaccgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGc > 1:6427991/1‑149 (MQ=255) accgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTa < 3:3198204/149‑1 (MQ=255) ccgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGTCGTGCTTAt < 1:3496572/149‑1 (MQ=255) cgctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATc > 2:6677174/1‑149 (MQ=255) gctacTGCCGCCGCCGTGGTTCTGGAGCTATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTTGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCTGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCg < 4:1402273/149‑1 (MQ=255) ctacTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCgg > 4:5032588/1‑149 (MQ=255) cTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGc < 3:3469783/149‑1 (MQ=255) cTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGc < 3:951233/149‑1 (MQ=255) ccgccgTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCAc > 1:604779/1‑149 (MQ=255) gccgTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGt > 3:1833659/1‑110 (MQ=255) gccgTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGc > 2:3953496/1‑149 (MQ=255) cgTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTg < 1:2431628/78‑1 (MQ=255) cgTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTg > 3:6144141/1‑149 (MQ=255) gTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTTCTTATCGGTGCGGTCACGCTGa > 3:4378101/1‑149 (MQ=255) tGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGaa > 2:1419491/1‑149 (MQ=255) gTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGc > 3:5786910/1‑121 (MQ=255) cTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAgg > 1:2915281/1‑149 (MQ=255) cTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAgg < 2:1957481/149‑1 (MQ=255) cTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAgg < 3:797897/149‑1 (MQ=255) cGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTCTGTCGTGGCAACCCTGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTAAATCAGGGGCGta < 4:6167184/149‑2 (MQ=255) gATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTga < 3:1284455/149‑1 (MQ=255) aTCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCttt > 2:6438897/1‑57 (MQ=255) aTCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGt > 4:2050967/1‑112 (MQ=255) aTCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTgag > 3:4500918/1‑149 (MQ=255) aTCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTgag > 3:2988908/1‑149 (MQ=255) gTACAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTc < 1:4448585/149‑1 (MQ=255) aCAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGc > 2:1031594/1‑149 (MQ=255) cAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTAt > 4:2719113/1‑111 (MQ=255) cAGTGATAACTTACAGCTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGcc < 3:2858392/149‑1 (MQ=255) aGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGccc > 4:533559/1‑149 (MQ=255) tGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGAttt < 1:4626093/80‑1 (MQ=255) tGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGAttt > 2:4626093/1‑80 (MQ=255) aTAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAAtt > 3:2167423/1‑149 (MQ=255) tAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTc < 4:5647686/149‑1 (MQ=255) tAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCAGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTc > 1:2742835/1‑149 (MQ=255) aCTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTTGCCCAATTCGc < 3:4166971/149‑1 (MQ=255) ttACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCaa > 1:3326527/1‑149 (MQ=255) tACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCATAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCaaa < 4:4882351/149‑1 (MQ=255) tACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCaaa < 2:6093313/149‑1 (MQ=255) cAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATg > 1:1008101/1‑149 (MQ=255) cAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATg > 2:1699256/1‑149 (MQ=255) gTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGa > 4:3916101/1‑149 (MQ=255) tttATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAggg < 2:847983/119‑1 (MQ=255) tttATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGAt > 4:3676549/1‑149 (MQ=255) tttATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGAt < 3:5296302/149‑1 (MQ=255) | TCTTGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGAT > NC_000913/2672886‑2673182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |