| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,447,561 | G→A | 13.1% | N69N (AAC→AAT) | rplX ← | 50S ribosomal subunit protein L24 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,447,561 | 0 | G | A | 13.1% | 2244.4 / 254.6 | 813 | N69N (AAC→AAT) | rplX | 50S ribosomal subunit protein L24 |
| Reads supporting (aligned to +/- strand): ref base G (336/370); new base A (48/59); total (384/429) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.08e-01 | |||||||||||
Only 100 of 822 total aligned reads displayed.
TGTAGTAATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACCGCGTTTAC > NC_000913/3447414‑3447709 | tGTAGTAATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGt < 3:239798/149‑1 (MQ=255) gtagtaATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGtt < 1:4952762/149‑1 (MQ=255) tagtaATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTATGTTg > 4:4455846/1‑149 (MQ=255) agtaATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTgg < 3:5541988/149‑1 (MQ=255) taATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGaa > 1:3396090/1‑149 (MQ=255) aaTCATGCAGTTTCGCCATCGTACTACTCCATATTACTTGTTAGTTTCGCTGTTAGACTTGAAGAAACGGACTATTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGaaa < 2:1769653/149‑1 (MQ=255) cATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCt < 2:7233395/149‑1 (MQ=255) gCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGaa > 2:4400482/1‑149 (MQ=255) cAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGCATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCt < 4:4875097/145‑1 (MQ=255) ttCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCGTTGAAGATTGCTACGTTGGAAACCTGAATAGCg < 3:4518129/149‑1 (MQ=255) gCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAAc < 3:6640306/136‑1 (MQ=255) cATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAAcc < 1:3086899/135‑1 (MQ=255) cATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGcttc > 4:2014543/1‑149 (MQ=255) aTCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGcttct > 4:1153575/1‑149 (MQ=255) aTCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGcttct > 3:5283833/1‑149 (MQ=255) cGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCttt < 3:2903947/149‑1 (MQ=255) cGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCttt < 1:2830857/149‑1 (MQ=255) actactCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTc < 1:1027957/149‑1 (MQ=255) actactCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTc < 1:6608644/149‑1 (MQ=255) actactCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTc > 4:516642/1‑149 (MQ=255) tactCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCaa > 2:4874770/1‑149 (MQ=255) actCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAAc < 1:5376225/149‑1 (MQ=255) ctCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGa < 1:1375962/128‑1 (MQ=255) ctCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACg > 3:3733364/1‑149 (MQ=255) ctCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTg < 2:4689404/127‑1 (MQ=255) tCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGa > 3:606725/1‑149 (MQ=255) tCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGa > 3:2778970/1‑149 (MQ=255) cAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCCTTTTCAACGATg > 3:3532942/1‑149 (MQ=255) cAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTAAGCCTTGCTGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATg > 3:1106914/1‑149 (MQ=255) cAAATTACTTGATAGTTTCGCTATTAGACTTGAAGAAACGGACTTTTTTACTGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGCAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATg > 4:5993657/1‑149 (MQ=255) aCTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCAccc < 2:2233264/149‑1 (MQ=255) gATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCggtt > 4:3543554/1‑149 (MQ=255) aTAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCggttg < 1:77041/149‑1 (MQ=255) aTAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCggttg < 4:3708199/149‑1 (MQ=255) tttCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTc > 1:2059822/1‑149 (MQ=255) ttCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCa > 2:1224037/1‑149 (MQ=255) ttGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGcc < 3:2021108/122‑1 (MQ=255) ttGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCgg > 2:4229801/1‑149 (MQ=255) ttGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCgg < 1:1866606/149‑1 (MQ=255) ttGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCgg > 3:3195780/1‑149 (MQ=255) aagaaACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCtt > 2:5521089/1‑149 (MQ=255) agaaACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGcc > 1:5539644/1‑137 (MQ=255) agaaACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTc < 3:943779/149‑1 (MQ=255) ggACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGt > 3:1307918/1‑149 (MQ=255) ggACCTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGt > 1:3828339/1‑149 (MQ=255) gACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGtt > 1:362506/1‑149 (MQ=255) aCTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGttt < 1:6998810/149‑1 (MQ=255) cTTTTTTACCGTCTTCGAATCTAAAGTCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTc < 1:4096155/149‑1 (MQ=255) ttttttACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAAt < 3:1642905/84‑1 (MQ=255) ttttttACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTc < 4:1485822/148‑1 (MQ=255) ttttttACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTc > 3:1485822/1‑148 (MQ=255) tttttACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCtt < 1:4489511/149‑1 (MQ=255) ttttACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTa < 3:2572391/149‑1 (MQ=255) tttACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTaa < 1:1672442/149‑1 (MQ=255) tACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGcttc < 3:6957207/88‑1 (MQ=255) aCCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCa < 1:5678664/149‑1 (MQ=255) aCCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCa > 1:4729059/1‑149 (MQ=255) aCCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCa < 1:2414325/149‑1 (MQ=255) tCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGAt < 2:6203462/149‑1 (MQ=255) gAATCTAAAGCCTACACGGTCAGCGTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCACCGATGCCACCCGGTTGGTACAGGGCCGGAACCGGGTTCTGATGTTTCTTAACCAGGTTGAAAc < 4:6206767/149‑1 (MQ=255) gAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATAc < 4:6680464/149‑1 (MQ=255) aTCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAg < 2:6070046/139‑1 (MQ=255) aTCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGAt > 2:5649995/1‑145 (MQ=255) cTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTc > 2:2717543/1‑149 (MQ=255) ccTACACGGTCATCCTTGCCGGTTGCTGCATTGAAGATTGCTACGTTGGGAACCTGAATAGCGTCTTCTTTTTCAGCGATGCCTCCCGGTTAGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAAt < 2:1470659/149‑1 (MQ=255) ccTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAAt < 2:3937374/149‑1 (MQ=255) cTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATg < 2:6458775/149‑1 (MQ=255) tACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGa < 3:4260487/149‑1 (MQ=255) cacGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTc < 2:3199343/119‑1 (MQ=255) acGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCt > 4:763107/1‑149 (MQ=255) gTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGc < 2:3005046/149‑1 (MQ=255) tCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGcc > 4:4189178/1‑149 (MQ=255) aGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAAt > 4:3281679/1‑138 (MQ=255) gCCTTGCCGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGCTGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGa < 2:3377605/149‑1 (MQ=255) ccTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAggg < 3:4760800/87‑1 (MQ=255) ccTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGaa < 1:604059/149‑1 (MQ=255) ccTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGaa < 2:2502375/149‑1 (MQ=255) ccTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGaa < 4:2872235/149‑1 (MQ=255) gCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACa > 4:1345218/1‑149 (MQ=255) ccGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCtt < 4:5700227/137‑1 (MQ=255) ccGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGtt < 4:2550338/116‑1 (MQ=255) cGGTTGCCGCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAgg > 2:5157034/1‑149 (MQ=255) ggTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGa > 3:407699/1‑59 (MQ=255) ggTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGa < 2:6931124/149‑1 (MQ=255) ttGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACa > 2:2076324/1‑149 (MQ=255) ccGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTc < 3:1808426/149‑1 (MQ=255) gCATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCtt > 3:5726560/1‑149 (MQ=255) cATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTc < 4:2230974/95‑1 (MQ=255) cATTGAAGATTGCTACATTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGttt > 1:626869/1‑94 (MQ=255) aTTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTaa < 1:6457346/149‑1 (MQ=255) ttGAAGATTGCTACATTGGAAACCTGAATCGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAAc > 4:2736711/1‑149 (MQ=255) aGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTa > 3:621419/1‑149 (MQ=255) gATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTAc > 3:5004476/1‑149 (MQ=255) tGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACcgc > 4:7022448/1‑149 (MQ=255) cTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCggttggtt > 4:5427949/1‑55 (MQ=255) tACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTcaa > 2:3624076/1‑104 (MQ=255) caCGTTGGAAACCCGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACCGCGtt > 4:4614188/2‑149 (MQ=255) cGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACCGCGTTTa < 4:4027589/149‑1 (MQ=255) cGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACCGCGTTTa < 4:1718555/149‑1 (MQ=255) gTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACCGCGTTTAc < 1:2597428/149‑1 (MQ=255) | TGTAGTAATCATGCAGTTTCGCCATCGTACTACTCCAAATTACTTGATAGTTTCGCTGTTAGACTTGAAGAAACGGACTTTTTTACCGTCTTCGAATCTAAAGCCTACACGGTCAGCCTTGCCGGTTGCCGCATTGAAGATTGCTACGTTGGAAACCTGAATAGCGGCTTCTTTTTCAACGATGCCACCCGGTTGGTTCAGGGCCGGAACCGGCTTCTGATGTTTCTTAACCAGGTTGATACCTTCAACAATGACCTTGCCGGAAGACAGGACATTCTTAACTTTACCGCGTTTAC > NC_000913/3447414‑3447709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |