| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,701,843 | Δ1 bp | 8.8% | intergenic (+9/+21) | yhjV → / ← dppF | putative transporter/dipeptide/heme ABC transporter ATPas |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,701,843 | 0 | G | . | 8.8% | 507.1 / 41.0 | 148 | intergenic (+9/+21) | yhjV/dppF | putative transporter/dipeptide/heme ABC transporter ATPas |
| Reads supporting (aligned to +/- strand): ref base G (64/71); new base . (5/8); total (69/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
TATTGTGTCGTGCCTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGCGCCGACGACAGCGGGCGTTGAAGGC > NC_000913/3701696‑3701989 | tgtgTCGTGCCTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATg < 2:1183904/149‑1 (MQ=255) tGCCTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCgg > 3:58595/1‑149 (MQ=255) ccTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGtt > 2:253175/1‑149 (MQ=255) cTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCgg > 3:482380/1‑146 (MQ=255) cTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGttt > 1:206409/1‑149 (MQ=255) tCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGtttt > 1:1038940/1‑149 (MQ=255) tCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGtttt < 2:206409/149‑1 (MQ=255) aTTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtgt < 2:564057/149‑1 (MQ=255) ttCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtgtg > 2:62693/1‑149 (MQ=255) tCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGa < 4:251554/149‑1 (MQ=255) ccGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAg > 4:506165/1‑149 (MQ=255) gTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGGGC‑CATGCGCTCCGGtt > 2:711695/1‑140 (MQ=255) tttttCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCAGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTa < 1:253175/149‑1 (MQ=255) aTCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCgg > 4:708392/1‑149 (MQ=255) tCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtgt < 1:689632/133‑1 (MQ=255) tataAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAtt > 1:1010423/1‑149 (MQ=255) ataAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAttt < 1:62693/149‑1 (MQ=255) ataAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAttt < 3:739968/149‑1 (MQ=255) ataAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAttt < 4:129031/149‑1 (MQ=255) taAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGtttt < 3:174393/127‑1 (MQ=255) taAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGtttt > 4:174393/1‑127 (MQ=255) aGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGa > 1:565357/1‑142 (MQ=255) aGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGa < 2:565357/142‑1 (MQ=255) gTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATc < 3:708392/149‑1 (MQ=255) tCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGa > 1:740372/1‑126 (MQ=255) tCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGa < 2:740372/126‑1 (MQ=255) cGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCt < 3:1082126/149‑1 (MQ=255) gCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAt < 4:1131/139‑1 (MQ=255) gCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAt > 3:1131/1‑139 (MQ=255) acaACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGAt < 3:506165/149‑1 (MQ=255) acaACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGAt > 4:1152077/1‑149 (MQ=255) tGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACa > 1:1308216/1‑149 (MQ=255) gAAAAACTTCGGGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGGGC‑CATGCGCTCCGGtttactca > 2:864931/1‑110 (MQ=37) gAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGGGC‑CATGCGCTCCGGtttactca < 1:864931/115‑6 (MQ=38) gAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGGGC‑CATGCGCTCCGGtttactca > 2:628831/1‑110 (MQ=38) gAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtgt < 4:710045/113‑1 (MQ=255) aaaaaCTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCa > 4:1340888/1‑149 (MQ=255) aaaaCTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCaa > 2:1188656/1‑149 (MQ=255) aaCTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCaaaa < 4:642157/149‑1 (MQ=255) ttCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAg < 1:369953/141‑1 (MQ=255) ttCGCGGATTTAAAGCCTGACTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTCTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAg > 2:369953/1‑141 (MQ=255) ggATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATc < 4:1329368/125‑1 (MQ=255) ggATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATc > 3:1329368/1‑125 (MQ=255) ttAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGt < 3:1152077/149‑1 (MQ=255) tAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGtt < 4:1466974/149‑1 (MQ=255) aaaGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGAt < 1:1055659/124‑1 (MQ=255) gCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGAcc < 2:1308216/149‑1 (MQ=255) ccTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCt > 3:1435403/1‑137 (MQ=255) ccTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCt < 4:1435403/137‑1 (MQ=255) ggCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGAccgccg < 1:540663/149‑1 (MQ=255) gCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAtt < 4:1135868/105‑1 (MQ=255) gCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGAccgcctt > 2:237239/1‑147 (MQ=255) ctgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCttt > 3:644874/1‑149 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtg > 2:910132/1‑78 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtg < 1:910132/78‑1 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAg > 1:256815/1‑114 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAg < 2:256815/114‑1 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCtttt < 2:1038940/149‑1 (MQ=255) gctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAATTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTa > 3:1263480/1‑149 (MQ=255) gTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCaaaa > 1:856701/1‑115 (MQ=255) gTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCt < 1:237239/149‑1 (MQ=255) ggCATTTTGCTATGCTTGTCGCTACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTTGTCTTTTAg < 4:938100/143‑1 (MQ=255) ggCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGGGC‑CATGCGCTCCGGtt < 3:992199/67‑1 (MQ=25) ggCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCa < 1:720131/93‑1 (MQ=255) ggCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCa < 1:615467/93‑1 (MQ=255) ggCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGc > 4:591510/1‑116 (MQ=255) ggCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGc < 3:591510/116‑1 (MQ=255) ggCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAg > 3:938100/1‑143 (MQ=255) gCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa > 1:442178/1‑120 (MQ=255) gCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa < 2:442178/120‑1 (MQ=255) ttttGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGc > 1:1444922/1‑149 (MQ=255) tttGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGtt < 3:1408417/62‑1 (MQ=255) ttGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCaa < 4:924225/149‑1 (MQ=255) tATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTgg < 3:1137627/149‑1 (MQ=255) tGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGAt < 1:1231377/88‑1 (MQ=255) gCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTAc > 3:700053/1‑106 (MQ=255) ttGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTc > 2:693314/1‑77 (MQ=255) ttGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTc < 1:693314/77‑1 (MQ=255) tCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtgt > 3:23817/1‑53 (MQ=255) tCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTtgt < 4:23817/53‑1 (MQ=255) gCCACTGTTGAAGCTGATTGAGTAAACCGTAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTg > 3:830403/1‑132 (MQ=255) gCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTg < 4:327659/132‑1 (MQ=255) gCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTg > 3:327659/1‑132 (MQ=255) ccACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTg < 2:334347/104‑1 (MQ=255) ccACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTg > 1:334347/1‑104 (MQ=255) cACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTAc > 4:662518/1‑97 (MQ=255) cACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAgg < 2:134356/144‑1 (MQ=255) cACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAgg > 1:134356/1‑144 (MQ=255) gTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAgc < 1:992979/149‑1 (MQ=255) gCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGCGCcgac > 2:268700/1‑149 (MQ=255) ttGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGCGCCGACGACAg > 4:1220068/1‑149 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGc < 2:1014962/112‑1 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGc > 1:1014962/1‑112 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTg < 4:653639/117‑1 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTg > 3:653639/1‑117 (MQ=255) caaaaCCGGGGC‑CATGCGCTCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCt < 2:744554/108‑1 (MQ=255) tAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGAt < 4:363021/58‑1 (MQ=255) aaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa > 3:180983/1‑77 (MQ=255) cGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGCGCCGACGACAGCGGGCGTTGa < 1:268700/149‑1 (MQ=255) ggAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGCGCCGACGACAGCGGGCGTTGaa < 4:532936/149‑1 (MQ=255) | TATTGTGTCGTGCCTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGCGCCGACGACAGCGGGCGTTGAAGGC > NC_000913/3701696‑3701989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |