New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	22430 =	111 (0.800)	6 (0.050)	4/214	NT	5.2%	coding (40/2817 nt)	ileS	isoleucyl‑tRNA synthetase
	?	NC_000913	22469 =	113 (0.860)					coding (79/2817 nt)	ileS	isoleucyl‑tRNA synthetase

GAATGCTGCCATTCGCATAAGGAGGGCCATCATGCAGAATGAAGGTTTTTTTGCCTTTTTTAGCCGCACGGATGATGCCGTACAGATCATCATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/22583‑22430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacccGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGTCACTCGGTTAACAAGATTCTGAAA  >  NC_000913/22469‑22615                                                                                                                                                                                                                                                                                                               GAATGCTGCCATTCGCATAAGGAGGGCCATCATGCAGAATGAAGGTTTTTTTGCCTTTTTTAGCCGCACGGATGATGCCGTACAGATCATCATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGG                                                                                                                                                          >  3:1145120/1‑149   ATGCTGCCATTCGCATAAGGAGGGCCATCATGCAGAATGAAGGTTTTTTTGCCTTTTTTAGCCGCACGGATGATGCCGTACAGATCATCATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAA                                                                                                                                                        <  2:1340375/149‑1   ATGCTGCCATTCGCATAAGGAGGGCCATCATGCAGAATGAAGGTTTTTTTGCCTTTTTTAGCCGCACGGATGATGCCGTACAGATCATCATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAA                                                                                                                                                        >  3:316476/1‑149    TGCTGCCATTCGCATAAGGAGGGCCATCATGCAGAATGAAGGTTTTTTTGCCTTTTTTAGCCGCACGGATGATGCCGTACAGATCATCATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAAC                                                                                                                                                       <  4:1136281/149‑1                                                                                            ATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCC                                                                                                                                                     <  4:502789/63‑1                                                                                            ATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCC                                                                                                                                                     >  3:502789/1‑63                                                                                                                   CGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTA                                                   >  2:1173497/1‑138                                                                                                                   CGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTA                                                   <  1:1173497/138‑1                                                                                                                    GGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAG                                       >  3:749375/1‑149                                                                                                                       TTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCAT                                    >  4:745560/1‑149                                                                                                                            GCTTGGCGAGATCGCCACG‑‑‑CGCGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCA                                        >  3:1341869/1‑137                                                                                                                            GCTTGGCGAGATCGCCACG‑‑‑CGCGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCA                                        <  4:1341869/137‑1                                                                                                                                                     GAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTA                                                                                                                  >  2:170230/1‑41                                                                                                                                                     GAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTA                                                                                                                  <  1:170230/41‑1                                                                                                                                                         CCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGTCACTCGGTTAACAAGATTCTGAAA  >  4:525640/1‑149                                                                                                                                                         CCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGTCACTCGGTTAACAAGATTCTGAAA  <  4:61907/149‑1                                                                                                                                                         CCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGT                          <  2:617898/125‑1                                                                                                                                                         CCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGT                          >  1:617898/1‑125                                                                                                                                                          CGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTA                                                   >  2:616439/1‑99                                                                                                                                                          CGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTA                                                   <  1:616439/99‑1                                                                                                                                                                                                                                                                                                               GAATGCTGCCATTCGCATAAGGAGGGCCATCATGCAGAATGAAGGTTTTTTTGCCTTTTTTAGCCGCACGGATGATGCCGTACAGATCATCATCAGTCCAACGCGCCAGCATTCCGGGTTCGCGCTTGGCGAGATCGCCACGCATCGGGAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/22583‑22430 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacccGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGTCACTCGGTTAACAAGATTCTGAAA  >  NC_000913/22469‑22615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.