| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2382550 | 58 (0.420) | 10 (0.080) | 10/210 | NT | 15.1% | intergenic (+25/‑163) | rbn/elaD | RNase BN, tRNA processing enzyme/protease, capable of cleaving an AMC‑ubiquitin model substrate |
| ? | NC_000913 | = 2382557 | 59 (0.460) | intergenic (+32/‑156) | rbn/elaD | RNase BN, tRNA processing enzyme/protease, capable of cleaving an AMC‑ubiquitin model substrate | |||||
GGCAAGCTAATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2382397‑2382550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacagggcAAGTTTCGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCAGTTCAGTCGCCGGGAAAATTGACCTGCATTCACGTAACAGGTGCTGACAACCTTTGTCATCATAGCGCGAGCTGACGTGG < NC_000913/2382557‑2382414 GGCAAGCTAATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAAC > 1:269847/1‑149GGCAAGCTAATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAAC < 3:1047750/149‑1 AAGCTAATCATTACCCACGTCAGCTCGCGCTATGATCACAAAGGTTGTCAGCACCTGTTTCGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTCTAACGTTTAACTCTGCTTATTATTAAAAACAGG < 2:1180533/149‑1 ATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGT > 1:1113927/1‑149 CCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTCGCCCT > 4:1145381/1‑149 ACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTCGCCCTGT < 3:1145381/149‑1 GTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTCGCCCTGTTT < 2:1113927/149‑1 AAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAG < 4:480271/109‑1 AAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAG > 3:480271/1‑109 CTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTC < 1:630352/104‑1 CTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTC > 2:630352/1‑104 GTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTT > 4:873546/1‑95 GTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTT < 3:873546/95‑1 GTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTCGCCCTGTTTT < 4:1190451/97‑1 ATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGG < 2:833795/74‑1 ATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGG > 1:833795/1‑74 GGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGG < 2:768216/66‑1 GGCGACTGAACGGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGG > 1:768216/1‑66 AATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTCGCCCTGT < 3:1316529/66‑1 AATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGCAAGTTTCGCCCTGT > 4:1316529/1‑66 TTATTAAAAACAGGGCGAAACTTGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCA > 3:1252801/1‑80 TTATTAAAAACAGGGCGAAACTTGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCA < 4:1252801/80‑1 AAAACAGGGCGAAACTTGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCAGTTCAGTCGCCGGGAAAATTGAC < 3:1190451/97‑1 ACAGGGCAAGTTTCGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCAGTTCAGTCGCCGGGAAAATTGACCTGCATTCACGTAACAGGTGCTGACAACCTTT < 3:589160/126‑1 ACAGGGCAAGTTTCGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCAGTTCAGTCGCCGGGAAAATTGACCTGCATTCACGTAACAGGTGCTGACAACCTTT > 4:589160/1‑126 AGGGCAAGTTTCGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCAGTTCAGTCGCCGGGAAAATTGACCTGCATTCACGTAACAGGTGCTGACAACCTTTGTCATCATAGCGCGAGCTGACGTGG < 1:82617/149‑1 GCAAGTTTCGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCACTCGCCAGTTCAGTCGCC < 3:899904/77‑1 GGCAAGCTAATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAACTCTGCTTATTATTAAAAACAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2382397‑2382550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacagggcAAGTTTCGCCCTGTTTTTAATAATAAGCAGAGTTAAACGTTAAACACGGTGAAATCATTCGCCAGTTCAGTCGCCGGGAAAATTGACCTGCATTCACGTAACAGGTGCTGACAACCTTTGTCATCATAGCGCGAGCTGACGTGG < NC_000913/2382557‑2382414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |